RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 TREML2Q5T2D2 321 aa15.19■□□□□ 0.02
SLIRP-201ENST00000238688 MYSM1Q5VVJ2 828 aa15.19■□□□□ 0.02
SLIRP-201ENST00000238688 TATDN1Q6P1N9 297 aa15.19■□□□□ 0.02
SLIRP-201ENST00000238688 GADL1Q6ZQY3 521 aa15.19■□□□□ 0.02
SLIRP-201ENST00000238688 TEX2Q8IWB9 1127 aa15.19■□□□□ 0.02
SLIRP-201ENST00000238688 LEO1Q8WVC0 666 aaPredicted RBP15.19■□□□□ 0.02
SLIRP-201ENST00000238688 PARK7Q99497 189 aaKnown RBP15.19■□□□□ 0.02
SLIRP-201ENST00000238688 MYL10Q9BUA6 226 aa15.19■□□□□ 0.02
SLIRP-201ENST00000238688 MTMR4Q9NYA4 1195 aa15.19■□□□□ 0.02
SLIRP-201ENST00000238688 CNTNAP5Q8WYK1 1306 aa15.18■□□□□ 0.02
SLIRP-201ENST00000238688 PALM3A6NDB9 673 aaPredicted RBP15.18■□□□□ 0.02
SLIRP-201ENST00000238688 GNRH1P01148 92 aa15.18■□□□□ 0.02
SLIRP-201ENST00000238688 OSBPP22059 807 aa15.18■□□□□ 0.02
SLIRP-201ENST00000238688 SPP2Q13103 211 aa15.18■□□□□ 0.02
SLIRP-201ENST00000238688 GNL2Q13823 731 aaKnown RBP15.18■□□□□ 0.02
SLIRP-201ENST00000238688 ARHGEF6Q15052 776 aa15.18■□□□□ 0.02
SLIRP-201ENST00000238688 RILPL1Q5EBL4 403 aa15.18■□□□□ 0.02
SLIRP-201ENST00000238688 STK11IPQ8N1F8 1099 aa15.18■□□□□ 0.02
SLIRP-201ENST00000238688 CCDC148Q8NFR7 591 aa15.18■□□□□ 0.02
SLIRP-201ENST00000238688 GPT2Q8TD30 523 aa15.18■□□□□ 0.02
SLIRP-201ENST00000238688 CCDC12Q8WUD4 166 aaPredicted RBP15.18■□□□□ 0.02
SLIRP-201ENST00000238688 PHKBQ93100 1093 aa15.18■□□□□ 0.02
SLIRP-201ENST00000238688 TMEM47Q9BQJ4 181 aa15.18■□□□□ 0.02
SLIRP-201ENST00000238688 KANSL2Q9H9L4 492 aa15.18■□□□□ 0.02
SLIRP-201ENST00000238688 GINM1Q9NU53 330 aa15.18■□□□□ 0.02
SLIRP-201ENST00000238688 SRRDQ9UH36 339 aa15.18■□□□□ 0.02
SLIRP-201ENST00000238688 SMIM22K7EJ46 135 aa15.17■□□□□ 0.02
SLIRP-201ENST00000238688 PARP1P09874 1014 aaKnown RBP15.17■□□□□ 0.02
SLIRP-201ENST00000238688 EN2P19622 333 aaPredicted RBP15.17■□□□□ 0.02
SLIRP-201ENST00000238688 RXRAP19793 462 aa15.17■□□□□ 0.02
SLIRP-201ENST00000238688 SHMT1P34896 483 aa15.17■□□□□ 0.02
SLIRP-201ENST00000238688 KIF22Q14807 665 aa15.17■□□□□ 0.02
SLIRP-201ENST00000238688 PFKFB3Q16875 520 aaPredicted RBP15.17■□□□□ 0.02
SLIRP-201ENST00000238688 SH3D19Q5HYK7 790 aa15.17■□□□□ 0.02
SLIRP-201ENST00000238688 GPATCH4Q5T3I0 446 aaKnown RBP15.17■□□□□ 0.02
SLIRP-201ENST00000238688 CCDC183Q5T5S1 534 aa15.17■□□□□ 0.02
SLIRP-201ENST00000238688 TMEM179Q6ZVK1 233 aa15.17■□□□□ 0.02
SLIRP-201ENST00000238688 NOSTRINQ8IVI9 506 aa15.17■□□□□ 0.02
SLIRP-201ENST00000238688 ZNF280CQ8ND82 737 aa15.17■□□□□ 0.02
SLIRP-201ENST00000238688 SH3TC2Q8TF17 1288 aa15.17■□□□□ 0.02
SLIRP-201ENST00000238688 DDX19AQ9NUU7 478 aaKnown RBP15.17■□□□□ 0.02
SLIRP-201ENST00000238688 NYAP2Q9P242 653 aa15.17■□□□□ 0.02
SLIRP-201ENST00000238688 STX8Q9UNK0 236 aa15.17■□□□□ 0.02
SLIRP-201ENST00000238688 AGTPBP1Q9UPW5 1226 aa15.17■□□□□ 0.02
SLIRP-201ENST00000238688 PLXNB2O15031 1838 aa15.16■□□□□ 0.02
SLIRP-201ENST00000238688 A0A1W2PQ27 194 aa15.16■□□□□ 0.02
SLIRP-201ENST00000238688 A0A1W2PQ64 194 aa15.16■□□□□ 0.02
SLIRP-201ENST00000238688 A0A1W2PQD8 194 aa15.16■□□□□ 0.02
SLIRP-201ENST00000238688 USP17L5A8MUK1 530 aa15.16■□□□□ 0.02
SLIRP-201ENST00000238688 SNHG28P0DPA3 235 aa15.16■□□□□ 0.02
SLIRP-201ENST00000238688 SCG2P13521 617 aa15.16■□□□□ 0.02
SLIRP-201ENST00000238688 TRAPPC10P48553 1259 aa15.16■□□□□ 0.02
SLIRP-201ENST00000238688 PRMT2P55345 433 aa15.16■□□□□ 0.02
SLIRP-201ENST00000238688 SLC9C1Q4G0N8 1177 aa15.16■□□□□ 0.02
SLIRP-201ENST00000238688 CCDC144CPQ8IYA2 1237 aa15.16■□□□□ 0.02
SLIRP-201ENST00000238688 PROCA1Q8NCQ7 364 aaPredicted RBP15.16■□□□□ 0.02
SLIRP-201ENST00000238688 SLC44A5Q8NCS7 719 aa15.16■□□□□ 0.02
SLIRP-201ENST00000238688 MKL1Q969V6 931 aa15.16■□□□□ 0.02
SLIRP-201ENST00000238688 CEP95Q96GE4 821 aa15.16■□□□□ 0.02
SLIRP-201ENST00000238688 WDR18Q9BV38 432 aa15.16■□□□□ 0.02
SLIRP-201ENST00000238688 CEP131Q9UPN4 1083 aa15.16■□□□□ 0.02
SLIRP-201ENST00000238688 FSD2A1L4K1 749 aa15.15■□□□□ 0.02
SLIRP-201ENST00000238688 GOLGA6L3A6NEY3 463 aa15.15■□□□□ 0.02
SLIRP-201ENST00000238688 NMT2O60551 498 aa15.15■□□□□ 0.02
SLIRP-201ENST00000238688 PPP6R2O75170 966 aa15.15■□□□□ 0.02
SLIRP-201ENST00000238688 HMGCS2P54868 508 aa15.15■□□□□ 0.02
SLIRP-201ENST00000238688 SLC4A8Q2Y0W8 1093 aa15.15■□□□□ 0.02
SLIRP-201ENST00000238688 CAVIN1Q6NZI2 390 aaKnown RBP15.15■□□□□ 0.02
SLIRP-201ENST00000238688 RAB11FIP4Q86YS3 637 aa15.15■□□□□ 0.02
SLIRP-201ENST00000238688 PHF20Q9BVI0 1012 aa15.15■□□□□ 0.02
SLIRP-201ENST00000238688 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.15■□□□□ 0.02
SLIRP-201ENST00000238688 MAD2L2Q9UI95 211 aa15.15■□□□□ 0.02
SLIRP-201ENST00000238688 GABRQQ9UN88 632 aa15.15■□□□□ 0.02
SLIRP-201ENST00000238688 GDF11O95390 407 aa15.14■□□□□ 0.01
SLIRP-201ENST00000238688 KRT2P35908 639 aa15.14■□□□□ 0.01
SLIRP-201ENST00000238688 MRE11P49959 708 aa15.14■□□□□ 0.01
SLIRP-201ENST00000238688 EVX2Q03828 476 aa15.14■□□□□ 0.01
SLIRP-201ENST00000238688 PKN1Q16512 942 aa15.14■□□□□ 0.01
SLIRP-201ENST00000238688 ZSCAN23Q3MJ62 389 aa15.14■□□□□ 0.01
SLIRP-201ENST00000238688 CERKLQ49MI3 558 aaPredicted RBP15.14■□□□□ 0.01
SLIRP-201ENST00000238688 ANO1Q5XXA6 986 aa15.14■□□□□ 0.01
SLIRP-201ENST00000238688 ADALQ6DHV7 355 aa15.14■□□□□ 0.01
SLIRP-201ENST00000238688 DIS3L2Q8IYB7 885 aaKnown RBP15.14■□□□□ 0.01
SLIRP-201ENST00000238688 SRBD1Q8N5C6 995 aaKnown RBP15.14■□□□□ 0.01
SLIRP-201ENST00000238688 DAGLBQ8NCG7 672 aa15.14■□□□□ 0.01
SLIRP-201ENST00000238688 LINC00301Q8NCQ3 95 aa15.14■□□□□ 0.01
SLIRP-201ENST00000238688 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.14■□□□□ 0.012e-6■□□□□ 10.5
SLIRP-201ENST00000238688 ESYT2A0FGR8 921 aa15.13■□□□□ 0.01
SLIRP-201ENST00000238688 CEP290O15078 2479 aa15.13■□□□□ 0.01
SLIRP-201ENST00000238688 CTAGE5O15320 804 aa15.13■□□□□ 0.01
SLIRP-201ENST00000238688 ASNSP08243 561 aa15.13■□□□□ 0.01
SLIRP-201ENST00000238688 PRKCZQ05513 592 aa15.13■□□□□ 0.01
SLIRP-201ENST00000238688 SLC39A14Q15043 492 aa15.13■□□□□ 0.01
SLIRP-201ENST00000238688 STK38Q15208 465 aa15.13■□□□□ 0.01
SLIRP-201ENST00000238688 MTFR1Q15390 333 aa15.13■□□□□ 0.01
SLIRP-201ENST00000238688 PPP1R18Q6NYC8 613 aa15.13■□□□□ 0.01
SLIRP-201ENST00000238688 DCAF4Q8WV16 495 aa15.13■□□□□ 0.01
SLIRP-201ENST00000238688 USP28Q96RU2 1077 aa15.13■□□□□ 0.01
SLIRP-201ENST00000238688 GLT8D2Q9H1C3 349 aa15.13■□□□□ 0.01
SLIRP-201ENST00000238688 GDPD2Q9HCC8 539 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms