RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 COL24A1Q17RW2 1714 aa19.42■□□□□ 0.7
USB1-201ENST00000219281 TTC26A0AVF1 554 aa19.42■□□□□ 0.7
USB1-201ENST00000219281 PP2D1A8MPX8 630 aa19.42■□□□□ 0.7
USB1-201ENST00000219281 PES1O00541 588 aaKnown RBP19.42■□□□□ 0.7
USB1-201ENST00000219281 NDUFA10O95299 355 aa19.42■□□□□ 0.7
USB1-201ENST00000219281 CALML3P27482 149 aa19.42■□□□□ 0.7
USB1-201ENST00000219281 KIF5BP33176 963 aa19.42■□□□□ 0.7
USB1-201ENST00000219281 RCSD1Q6JBY9 416 aa19.42■□□□□ 0.7
USB1-201ENST00000219281 TXNRD3Q86VQ6 643 aa19.42■□□□□ 0.7
USB1-201ENST00000219281 MB21D1Q8N884 522 aa19.42■□□□□ 0.7
USB1-201ENST00000219281 RASSF8Q8NHQ8 419 aa19.42■□□□□ 0.7
USB1-201ENST00000219281 L1RE1Q9UN81 338 aa19.42■□□□□ 0.7
USB1-201ENST00000219281 MYH8P13535 1937 aa19.41■□□□□ 0.7
USB1-201ENST00000219281 AMPD2Q01433 879 aa19.41■□□□□ 0.7
USB1-201ENST00000219281 NFIXQ14938 502 aa19.41■□□□□ 0.7
USB1-201ENST00000219281 NCAPH2Q6IBW4 605 aa19.41■□□□□ 0.7
USB1-201ENST00000219281 PLIN2Q99541 437 aa19.41■□□□□ 0.7
USB1-201ENST00000219281 PCDHA4Q9UN74 947 aa19.41■□□□□ 0.7
USB1-201ENST00000219281 TAF1LQ8IZX4 1826 aa19.41■□□□□ 0.7
USB1-201ENST00000219281 PRDX5P30044 214 aa19.41■□□□□ 0.7
USB1-201ENST00000219281 NAALADL2Q58DX5 795 aa19.41■□□□□ 0.7
USB1-201ENST00000219281 NOA1Q8NC60 698 aaKnown RBP19.41■□□□□ 0.7
USB1-201ENST00000219281 OR8K1Q8NGG5 319 aa19.41■□□□□ 0.7
USB1-201ENST00000219281 KAT14Q9H8E8 782 aa19.41■□□□□ 0.7
USB1-201ENST00000219281 ATP8A2Q9NTI2 1148 aa19.41■□□□□ 0.7
USB1-201ENST00000219281 LY75O60449 1722 aa19.41■□□□□ 0.7
USB1-201ENST00000219281 ZBTB22O15209 634 aa19.4■□□□□ 0.7
USB1-201ENST00000219281 DTHD1Q6ZMT9 781 aa19.4■□□□□ 0.7
USB1-201ENST00000219281 STAG2Q8N3U4 1231 aa19.4■□□□□ 0.7
USB1-201ENST00000219281 ARPP21Q9UBL0 812 aaPredicted RBP19.4■□□□□ 0.7
USB1-201ENST00000219281 LUC7L2Q9Y383 392 aaKnown RBP19.4■□□□□ 0.7
USB1-201ENST00000219281 SBF2Q86WG5 1849 aa19.4■□□□□ 0.7
USB1-201ENST00000219281 HIBADHP31937 336 aaKnown RBP19.4■□□□□ 0.7
USB1-201ENST00000219281 EXOC4Q96A65 974 aa19.4■□□□□ 0.7
USB1-201ENST00000219281 ANKRD2Q9GZV1 360 aa19.4■□□□□ 0.7
USB1-201ENST00000219281 JAG2Q9Y219 1238 aa19.4■□□□□ 0.7
USB1-201ENST00000219281 IRS2Q9Y4H2 1338 aa19.39■□□□□ 0.7
USB1-201ENST00000219281 LGALS16A8MUM7 142 aa19.39■□□□□ 0.69
USB1-201ENST00000219281 USP17L8P0C7I0 530 aa19.39■□□□□ 0.69
USB1-201ENST00000219281 LMAN1P49257 510 aa19.39■□□□□ 0.69
USB1-201ENST00000219281 TYW1BQ6NUM6 668 aa19.39■□□□□ 0.69
USB1-201ENST00000219281 CERKQ8TCT0 537 aa19.39■□□□□ 0.69
USB1-201ENST00000219281 TRERF1Q96PN7 1200 aa19.39■□□□□ 0.69
USB1-201ENST00000219281 TMEM60Q9H2L4 133 aa19.39■□□□□ 0.69
USB1-201ENST00000219281 VPS18Q9P253 973 aa19.39■□□□□ 0.69
USB1-201ENST00000219281 TFR2Q9UP52 801 aa19.39■□□□□ 0.69
USB1-201ENST00000219281 CCDC194A0A1B0GVG4 234 aa19.39■□□□□ 0.69
USB1-201ENST00000219281 N4BP1O75113 896 aaKnown RBP19.39■□□□□ 0.69
USB1-201ENST00000219281 TFAP4Q01664 338 aa19.39■□□□□ 0.69
USB1-201ENST00000219281 SBK1Q52WX2 424 aa19.39■□□□□ 0.69
USB1-201ENST00000219281 ZNF507Q8TCN5 953 aa19.39■□□□□ 0.69
USB1-201ENST00000219281 TRIM47Q96LD4 638 aa19.39■□□□□ 0.69
USB1-201ENST00000219281 SH3GLB2Q9NR46 395 aa19.39■□□□□ 0.69
USB1-201ENST00000219281 MCM9Q9NXL9 1143 aa19.39■□□□□ 0.69
USB1-201ENST00000219281 TRPC5Q9UL62 973 aaPredicted RBP19.39■□□□□ 0.69
USB1-201ENST00000219281 ENC1O14682 589 aa19.38■□□□□ 0.69
USB1-201ENST00000219281 KLRC4O43908 158 aa19.38■□□□□ 0.69
USB1-201ENST00000219281 EIF3JO75822 258 aaKnown RBP19.38■□□□□ 0.69
USB1-201ENST00000219281 DNAJC7Q99615 494 aa19.38■□□□□ 0.69
USB1-201ENST00000219281 IL17RBQ9NRM6 502 aa19.38■□□□□ 0.69
USB1-201ENST00000219281 PCDHA6Q9UN73 950 aa19.38■□□□□ 0.69
USB1-201ENST00000219281 PCDHA8Q9Y5H6 950 aa19.38■□□□□ 0.69
USB1-201ENST00000219281 A0A1W2PQC6 194 aa19.37■□□□□ 0.69
USB1-201ENST00000219281 EEF1GP26641 437 aaKnown RBP19.37■□□□□ 0.69
USB1-201ENST00000219281 UBA7P41226 1012 aa19.37■□□□□ 0.69
USB1-201ENST00000219281 IRX5P78411 483 aaPredicted RBP19.37■□□□□ 0.69
USB1-201ENST00000219281 KCNB1Q14721 858 aa19.37■□□□□ 0.69
USB1-201ENST00000219281 INF2Q27J81 1249 aa19.37■□□□□ 0.69
USB1-201ENST00000219281 TSR1Q2NL82 804 aaKnown RBP19.37■□□□□ 0.69
USB1-201ENST00000219281 WDR59Q6PJI9 974 aa19.37■□□□□ 0.69
USB1-201ENST00000219281 PNMA1Q8ND90 353 aa19.37■□□□□ 0.69
USB1-201ENST00000219281 THAP9Q9H5L6 903 aa19.37■□□□□ 0.69
USB1-201ENST00000219281 HAUS4Q9H6D7 363 aa19.37■□□□□ 0.69
USB1-201ENST00000219281 PSD3Q9NYI0 1048 aa19.37■□□□□ 0.69
USB1-201ENST00000219281 HDAC6Q9UBN7 1215 aa19.37■□□□□ 0.69
USB1-201ENST00000219281 CAPN11Q9UMQ6 739 aa19.37■□□□□ 0.69
USB1-201ENST00000219281 MYH13Q9UKX3 1938 aa19.37■□□□□ 0.69
USB1-201ENST00000219281 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.37■□□□□ 0.69
USB1-201ENST00000219281 HERVK_113P62684 666 aa19.37■□□□□ 0.69
USB1-201ENST00000219281 STIM1Q13586 685 aa19.37■□□□□ 0.69
USB1-201ENST00000219281 CASP8Q14790 479 aa19.37■□□□□ 0.69
USB1-201ENST00000219281 TRAPPC11Q7Z392 1133 aa19.37■□□□□ 0.69
USB1-201ENST00000219281 CCDC148Q8NFR7 591 aa19.37■□□□□ 0.69
USB1-201ENST00000219281 GBP3Q9H0R5 595 aa19.37■□□□□ 0.69
USB1-201ENST00000219281 MAGEC2Q9UBF1 373 aaPredicted RBP19.37■□□□□ 0.69
USB1-201ENST00000219281 PDS5AQ29RF7 1337 aaKnown RBP19.37■□□□□ 0.69
USB1-201ENST00000219281 M0R2N6 131 aa19.36■□□□□ 0.69
USB1-201ENST00000219281 ZSCAN26Q16670 478 aa19.36■□□□□ 0.69
USB1-201ENST00000219281 DYNLL2Q96FJ2 89 aa19.36■□□□□ 0.69
USB1-201ENST00000219281 MTMR7Q9Y216 660 aa19.36■□□□□ 0.69
USB1-201ENST00000219281 B4DLN1 442 aa19.36■□□□□ 0.69
USB1-201ENST00000219281 PSMD14O00487 310 aa19.36■□□□□ 0.69
USB1-201ENST00000219281 PSMA7O14818 248 aa19.36■□□□□ 0.69
USB1-201ENST00000219281 CCDC122Q5T0U0 273 aa19.36■□□□□ 0.69
USB1-201ENST00000219281 GIMAP8Q8ND71 665 aaPredicted RBP19.36■□□□□ 0.69
USB1-201ENST00000219281 RHOBTB3O94955 611 aa19.35■□□□□ 0.69
USB1-201ENST00000219281 ATP1A1P05023 1023 aaKnown RBP19.35■□□□□ 0.69
USB1-201ENST00000219281 MUM1L1Q5H9M0 696 aa19.35■□□□□ 0.69
USB1-201ENST00000219281 HEATR3Q7Z4Q2 680 aa19.35■□□□□ 0.69
USB1-201ENST00000219281 DGKHQ86XP1 1220 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms