RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 RAVER2Q9HCJ3 691 aaKnown RBP20.37■□□□□ 0.85
MRPL28-201ENST00000199706 NRBP1Q9UHY1 535 aa20.37■□□□□ 0.85
MRPL28-201ENST00000199706 RIPK3Q9Y572 518 aa20.37■□□□□ 0.85
MRPL28-201ENST00000199706 PDE4DIPQ5VU43 2346 aa20.36■□□□□ 0.85
MRPL28-201ENST00000199706 IFIT3O14879 490 aaKnown RBP20.36■□□□□ 0.85
MRPL28-201ENST00000199706 COBLO75128 1261 aa20.36■□□□□ 0.85
MRPL28-201ENST00000199706 PARP1P09874 1014 aaKnown RBP20.36■□□□□ 0.85
MRPL28-201ENST00000199706 PRKAR2AP13861 404 aaKnown RBP20.36■□□□□ 0.85
MRPL28-201ENST00000199706 ANTXR2P58335 489 aa20.36■□□□□ 0.85
MRPL28-201ENST00000199706 TTBK2Q6IQ55 1244 aa20.36■□□□□ 0.85
MRPL28-201ENST00000199706 ZNF467Q7Z7K2 595 aaPredicted RBP20.36■□□□□ 0.85
MRPL28-201ENST00000199706 IGDCC4Q8TDY8 1250 aa20.36■□□□□ 0.85
MRPL28-201ENST00000199706 MAP3K14Q99558 947 aa20.36■□□□□ 0.85
MRPL28-201ENST00000199706 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.36■□□□□ 0.85
MRPL28-201ENST00000199706 ACAD9Q9H845 621 aa20.36■□□□□ 0.85
MRPL28-201ENST00000199706 HMX1Q9NP08 348 aaPredicted RBP20.36■□□□□ 0.85
MRPL28-201ENST00000199706 FRMPD2Q68DX3 1309 aaPredicted RBP20.35■□□□□ 0.85
MRPL28-201ENST00000199706 LIFRP42702 1097 aa20.35■□□□□ 0.85
MRPL28-201ENST00000199706 WTAPQ15007 396 aa20.35■□□□□ 0.85
MRPL28-201ENST00000199706 CCL14Q16627 93 aa20.35■□□□□ 0.85
MRPL28-201ENST00000199706 ZNF792Q3KQV3 632 aa20.35■□□□□ 0.85
MRPL28-201ENST00000199706 TMTC2Q8N394 836 aa20.35■□□□□ 0.85
MRPL28-201ENST00000199706 NPLOC4Q8TAT6 608 aa20.35■□□□□ 0.85
MRPL28-201ENST00000199706 MAML3Q96JK9 1138 aa20.35■□□□□ 0.85
MRPL28-201ENST00000199706 CRISPLD2Q9H0B8 497 aa20.35■□□□□ 0.85
MRPL28-201ENST00000199706 GPCPD1Q9NPB8 672 aa20.35■□□□□ 0.85
MRPL28-201ENST00000199706 MTMR7Q9Y216 660 aa20.35■□□□□ 0.85
MRPL28-201ENST00000199706 PFASO15067 1338 aa20.34■□□□□ 0.85
MRPL28-201ENST00000199706 MYH6P13533 1939 aa20.34■□□□□ 0.85
MRPL28-201ENST00000199706 SLC16A2P36021 539 aa20.34■□□□□ 0.85
MRPL28-201ENST00000199706 MLLT1Q03111 559 aaPredicted RBP20.34■□□□□ 0.85
MRPL28-201ENST00000199706 CACNB2Q08289 660 aaPredicted RBP20.34■□□□□ 0.85
MRPL28-201ENST00000199706 TROAPQ12815 778 aa20.34■□□□□ 0.85
MRPL28-201ENST00000199706 TMEM67Q5HYA8 995 aa20.34■□□□□ 0.85
MRPL28-201ENST00000199706 U2AF1L4Q8WU68 220 aaKnown RBP20.34■□□□□ 0.85
MRPL28-201ENST00000199706 RNF146Q9NTX7 359 aa20.34■□□□□ 0.85
MRPL28-201ENST00000199706 FLRT1Q9NZU1 646 aa20.34■□□□□ 0.85
MRPL28-201ENST00000199706 FRMPD3Q5JV73 1810 aa20.34■□□□□ 0.85
MRPL28-201ENST00000199706 SMCHD1A6NHR9 2005 aa20.33■□□□□ 0.85
MRPL28-201ENST00000199706 PALM3A6NDB9 673 aaPredicted RBP20.33■□□□□ 0.85
MRPL28-201ENST00000199706 PRC1O43663 620 aa20.33■□□□□ 0.85
MRPL28-201ENST00000199706 DDAH1O94760 285 aa20.33■□□□□ 0.85
MRPL28-201ENST00000199706 SGPL1O95470 568 aa20.33■□□□□ 0.85
MRPL28-201ENST00000199706 HMGB1P09429 215 aaKnown RBP20.33■□□□□ 0.85
MRPL28-201ENST00000199706 HSPA4P34932 840 aa20.33■□□□□ 0.85
MRPL28-201ENST00000199706 GRM4Q14833 912 aa20.33■□□□□ 0.85
MRPL28-201ENST00000199706 SHISA4Q96DD7 197 aa20.33■□□□□ 0.85
MRPL28-201ENST00000199706 AGBL1Q96MI9 1066 aa20.33■□□□□ 0.85
MRPL28-201ENST00000199706 LY9Q9HBG7 655 aa20.33■□□□□ 0.85
MRPL28-201ENST00000199706 CCPG1Q9ULG6 757 aa20.33■□□□□ 0.85
MRPL28-201ENST00000199706 SYNGAP1Q96PV0 1343 aa20.32■□□□□ 0.84
MRPL28-201ENST00000199706 SH2B2O14492 632 aaPredicted RBP20.32■□□□□ 0.84
MRPL28-201ENST00000199706 MSCO60682 206 aa20.32■□□□□ 0.84
MRPL28-201ENST00000199706 EIF5BO60841 1220 aaKnown RBP20.32■□□□□ 0.84
MRPL28-201ENST00000199706 CYBAP13498 195 aa20.32■□□□□ 0.84
MRPL28-201ENST00000199706 TRIM32Q13049 653 aa20.32■□□□□ 0.84
MRPL28-201ENST00000199706 MAMDC4Q6UXC1 1216 aa20.32■□□□□ 0.84
MRPL28-201ENST00000199706 CATIPQ7Z7H3 387 aa20.32■□□□□ 0.84
MRPL28-201ENST00000199706 SGMS1Q86VZ5 419 aa20.32■□□□□ 0.84
MRPL28-201ENST00000199706 ANKLE1Q8NAG6 615 aa20.32■□□□□ 0.84
MRPL28-201ENST00000199706 LOC102724159A0A0B4J2E5 919 aa20.31■□□□□ 0.84
MRPL28-201ENST00000199706 GOLGA8HP0CJ92 632 aa20.31■□□□□ 0.84
MRPL28-201ENST00000199706 EN2P19622 333 aaPredicted RBP20.31■□□□□ 0.84
MRPL28-201ENST00000199706 PWP2Q15269 919 aaKnown RBP20.31■□□□□ 0.84
MRPL28-201ENST00000199706 CCDC174Q6PII3 467 aa20.31■□□□□ 0.84
MRPL28-201ENST00000199706 UBE2Q1Q7Z7E8 422 aa20.31■□□□□ 0.84
MRPL28-201ENST00000199706 ANKRD35Q8N283 1001 aa20.31■□□□□ 0.84
MRPL28-201ENST00000199706 MTMR8Q96EF0 704 aa20.31■□□□□ 0.84
MRPL28-201ENST00000199706 DDX11Q96FC9 970 aa20.31■□□□□ 0.84
MRPL28-201ENST00000199706 TRERF1Q96PN7 1200 aa20.31■□□□□ 0.84
MRPL28-201ENST00000199706 NEK1Q96PY6 1258 aa20.31■□□□□ 0.84
MRPL28-201ENST00000199706 TINF2Q9BSI4 451 aa20.31■□□□□ 0.84
MRPL28-201ENST00000199706 A1CFQ9NQ94 594 aaKnown RBP20.31■□□□□ 0.84
MRPL28-201ENST00000199706 MAD2L2Q9UI95 211 aa20.31■□□□□ 0.84
MRPL28-201ENST00000199706 MYCP01106 439 aaPredicted RBP20.3■□□□□ 0.84
MRPL28-201ENST00000199706 PGK2P07205 417 aa20.3■□□□□ 0.84
MRPL28-201ENST00000199706 ALAS1P13196 640 aa20.3■□□□□ 0.84
MRPL28-201ENST00000199706 DHX32Q7L7V1 743 aaKnown RBP20.3■□□□□ 0.84
MRPL28-201ENST00000199706 RASEFQ8IZ41 740 aa20.3■□□□□ 0.84
MRPL28-201ENST00000199706 FAM133AQ8N9E0 248 aa20.3■□□□□ 0.84
MRPL28-201ENST00000199706 CHMP4CQ96CF2 233 aa20.3■□□□□ 0.84
MRPL28-201ENST00000199706 DEFB118Q96PH6 123 aa20.3■□□□□ 0.84
MRPL28-201ENST00000199706 LCTP09848 1927 aa20.29■□□□□ 0.84
MRPL28-201ENST00000199706 KLRF2D3W0D1 207 aa20.29■□□□□ 0.84
MRPL28-201ENST00000199706 CALM1P0DP23 149 aa20.29■□□□□ 0.84
MRPL28-201ENST00000199706 CALM2P0DP24 149 aa20.29■□□□□ 0.84
MRPL28-201ENST00000199706 CALM3P0DP25 149 aa20.29■□□□□ 0.84
MRPL28-201ENST00000199706 SMARCA1P28370 1054 aa20.29■□□□□ 0.84
MRPL28-201ENST00000199706 KIF5BP33176 963 aa20.29■□□□□ 0.84
MRPL28-201ENST00000199706 EXOSC10Q01780 885 aaKnown RBP20.29■□□□□ 0.84
MRPL28-201ENST00000199706 TRAF1Q13077 416 aa20.29■□□□□ 0.84
MRPL28-201ENST00000199706 CDC37Q16543 378 aaPredicted RBP20.29■□□□□ 0.84
MRPL28-201ENST00000199706 CHST3Q7LGC8 479 aa20.29■□□□□ 0.84
MRPL28-201ENST00000199706 ADGRF4Q8IZF3 695 aa20.29■□□□□ 0.84
MRPL28-201ENST00000199706 ZNF654Q8IZM8 581 aa20.29■□□□□ 0.84
MRPL28-201ENST00000199706 RGS22Q8NE09 1264 aa20.29■□□□□ 0.84
MRPL28-201ENST00000199706 SENP2Q9HC62 589 aa20.29■□□□□ 0.84
MRPL28-201ENST00000199706 HOMER2Q9NSB8 354 aa20.29■□□□□ 0.84
MRPL28-201ENST00000199706 OGDHLQ9ULD0 1010 aa20.29■□□□□ 0.84
MRPL28-201ENST00000199706 CYP2C19P33261 490 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms