RNA–Protein interactions for RNA: ENST00000199448.8

EPDR1-201, Transcript of ependymin related 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EPDR1, Length 2,599 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPDR1-201ENST00000199448 SMCR8Q8TEV9 937 aaPredicted RBP23.06■■□□□ 1.28
EPDR1-201ENST00000199448 LOC102724428A0A0B4J2F2 783 aa23.06■■□□□ 1.28
EPDR1-201ENST00000199448 LONP1P36776 959 aaKnown RBP23.06■■□□□ 1.28
EPDR1-201ENST00000199448 SIK1P57059 783 aa23.06■■□□□ 1.28
EPDR1-201ENST00000199448 PARP10Q53GL7 1025 aa23.06■■□□□ 1.28
EPDR1-201ENST00000199448 KRT26Q7Z3Y9 468 aa23.06■■□□□ 1.28
EPDR1-201ENST00000199448 DUSP9Q99956 384 aaKnown RBP23.06■■□□□ 1.28
EPDR1-201ENST00000199448 TRIM34Q9BYJ4 488 aa23.06■■□□□ 1.28
EPDR1-201ENST00000199448 MYO1AQ9UBC5 1043 aa23.06■■□□□ 1.28
EPDR1-201ENST00000199448 USP17L3A6NCW0 530 aa23.05■■□□□ 1.28
EPDR1-201ENST00000199448 USP17L4A6NCW7 530 aa23.05■■□□□ 1.28
EPDR1-201ENST00000199448 PLEKP08567 350 aaPredicted RBP23.05■■□□□ 1.28
EPDR1-201ENST00000199448 ERCC3P19447 782 aa23.05■■□□□ 1.28
EPDR1-201ENST00000199448 TNNT3P45378 269 aaPredicted RBP23.05■■□□□ 1.28
EPDR1-201ENST00000199448 TRAPPC10P48553 1259 aa23.05■■□□□ 1.28
EPDR1-201ENST00000199448 TUBB2AQ13885 445 aa23.05■■□□□ 1.28
EPDR1-201ENST00000199448 USP17L1Q7RTZ2 530 aa23.05■■□□□ 1.28
EPDR1-201ENST00000199448 TXNRD3Q86VQ6 643 aa23.05■■□□□ 1.28
EPDR1-201ENST00000199448 TUBB2BQ9BVA1 445 aa23.05■■□□□ 1.28
EPDR1-201ENST00000199448 FAM204AQ9H8W3 233 aa23.05■■□□□ 1.28
EPDR1-201ENST00000199448 RMND1Q9NWS8 449 aa23.05■■□□□ 1.28
EPDR1-201ENST00000199448 MACROD2A1Z1Q3 448 aa23.05■■□□□ 1.28
EPDR1-201ENST00000199448 MYO1CO00159 1063 aa23.05■■□□□ 1.28
EPDR1-201ENST00000199448 PSMD14O00487 310 aa23.05■■□□□ 1.28
EPDR1-201ENST00000199448 USP14P54578 494 aa23.05■■□□□ 1.28
EPDR1-201ENST00000199448 TRIM14Q14142 442 aa23.05■■□□□ 1.28
EPDR1-201ENST00000199448 TTI2Q6NXR4 508 aa23.05■■□□□ 1.28
EPDR1-201ENST00000199448 CAPN11Q9UMQ6 739 aa23.05■■□□□ 1.28
EPDR1-201ENST00000199448 SAR1BQ9Y6B6 198 aa23.05■■□□□ 1.28
EPDR1-201ENST00000199448 CYTH3O43739 400 aa23.04■■□□□ 1.28
EPDR1-201ENST00000199448 EIF3JO75822 258 aaKnown RBP23.04■■□□□ 1.28
EPDR1-201ENST00000199448 SYF2O95926 243 aaKnown RBP23.04■■□□□ 1.28
EPDR1-201ENST00000199448 GOLGA8HP0CJ92 632 aa23.04■■□□□ 1.28
EPDR1-201ENST00000199448 FCER1AP12319 257 aa23.04■■□□□ 1.28
EPDR1-201ENST00000199448 TFAP4Q01664 338 aa23.04■■□□□ 1.28
EPDR1-201ENST00000199448 DTHD1Q6ZMT9 781 aa23.04■■□□□ 1.28
EPDR1-201ENST00000199448 MCM9Q9NXL9 1143 aa23.04■■□□□ 1.28
EPDR1-201ENST00000199448 ORC4O43929 436 aa23.04■■□□□ 1.28
EPDR1-201ENST00000199448 PCDHA6Q9UN73 950 aa23.04■■□□□ 1.28
EPDR1-201ENST00000199448 PCDHA4Q9UN74 947 aa23.04■■□□□ 1.28
EPDR1-201ENST00000199448 PCDHA8Q9Y5H6 950 aa23.04■■□□□ 1.28
EPDR1-201ENST00000199448 PDS5AQ29RF7 1337 aaKnown RBP23.04■■□□□ 1.28
EPDR1-201ENST00000199448 STK4Q13043 487 aa23.03■■□□□ 1.28
EPDR1-201ENST00000199448 UBE4AQ14139 1066 aa23.03■■□□□ 1.28
EPDR1-201ENST00000199448 KIAA1328Q86T90 577 aa23.03■■□□□ 1.28
EPDR1-201ENST00000199448 SLC44A5Q8NCS7 719 aa23.03■■□□□ 1.28
EPDR1-201ENST00000199448 CCDC148Q8NFR7 591 aa23.03■■□□□ 1.28
EPDR1-201ENST00000199448 TUBGCP2Q9BSJ2 902 aa23.03■■□□□ 1.28
EPDR1-201ENST00000199448 TRIM21P19474 475 aaKnown RBP23.03■■□□□ 1.28
EPDR1-201ENST00000199448 UBA7P41226 1012 aa23.03■■□□□ 1.28
EPDR1-201ENST00000199448 ARL6IP4Q66PJ3 421 aaKnown RBP23.03■■□□□ 1.28
EPDR1-201ENST00000199448 ANKRD40Q6AI12 368 aa23.03■■□□□ 1.28
EPDR1-201ENST00000199448 WDR93Q6P2C0 686 aa23.03■■□□□ 1.28
EPDR1-201ENST00000199448 HEATR3Q7Z4Q2 680 aa23.03■■□□□ 1.28
EPDR1-201ENST00000199448 CSGALNACT2Q8N6G5 542 aa23.03■■□□□ 1.28
EPDR1-201ENST00000199448 HAUS4Q9H6D7 363 aa23.03■■□□□ 1.28
EPDR1-201ENST00000199448 ZNF263O14978 683 aa23.02■■□□□ 1.28
EPDR1-201ENST00000199448 PNMA1Q8ND90 353 aa23.02■■□□□ 1.28
EPDR1-201ENST00000199448 JAKMIP2Q96AA8 810 aa23.02■■□□□ 1.28
EPDR1-201ENST00000199448 TTYH3Q9C0H2 523 aa23.02■■□□□ 1.28
EPDR1-201ENST00000199448 NHEJ1Q9H9Q4 299 aaPredicted RBP23.02■■□□□ 1.28
EPDR1-201ENST00000199448 CCDC194A0A1B0GVG4 234 aa23.02■■□□□ 1.28
EPDR1-201ENST00000199448 M0R2N6 131 aa23.02■■□□□ 1.28
EPDR1-201ENST00000199448 RNF40O75150 1001 aa23.02■■□□□ 1.28
EPDR1-201ENST00000199448 EZH2Q15910 746 aaKnown RBP23.02■■□□□ 1.28
EPDR1-201ENST00000199448 HSP90B2PQ58FF3 399 aa23.02■■□□□ 1.28
EPDR1-201ENST00000199448 KAT14Q9H8E8 782 aa23.02■■□□□ 1.28
EPDR1-201ENST00000199448 BSDC1Q9NW68 430 aaPredicted RBP23.02■■□□□ 1.28
EPDR1-201ENST00000199448 C2orf54Q08AI8 447 aa23.01■■□□□ 1.27
EPDR1-201ENST00000199448 GIMAP8Q8ND71 665 aaPredicted RBP23.01■■□□□ 1.27
EPDR1-201ENST00000199448 DRC1Q96MC2 740 aa23.01■■□□□ 1.27
EPDR1-201ENST00000199448 PCMTD1Q96MG8 357 aaPredicted RBP23.01■■□□□ 1.27
EPDR1-201ENST00000199448 SMARCAL1Q9NZC9 954 aa23.01■■□□□ 1.27
EPDR1-201ENST00000199448 RRP15Q9Y3B9 282 aaKnown RBP23.01■■□□□ 1.27
EPDR1-201ENST00000199448 MYH14Q7Z406 1995 aaKnown RBP23.01■■□□□ 1.27
EPDR1-201ENST00000199448 PLCG1P19174 1290 aa23.01■■□□□ 1.27
EPDR1-201ENST00000199448 TBC1D8BQ0IIM8 1120 aa23.01■■□□□ 1.27
EPDR1-201ENST00000199448 CCDC178Q5BJE1 867 aa23.01■■□□□ 1.27
EPDR1-201ENST00000199448 SRLQ86TD4 932 aa23.01■■□□□ 1.27
EPDR1-201ENST00000199448 CRNKL1Q9BZJ0 848 aaKnown RBP23.01■■□□□ 1.27
EPDR1-201ENST00000199448 KBTBD4Q9NVX7 518 aa23.01■■□□□ 1.27
EPDR1-201ENST00000199448 ZC3H4Q9UPT8 1303 aaKnown RBP23.01■■□□□ 1.27
EPDR1-201ENST00000199448 EPHB6O15197 1021 aa23■■□□□ 1.27
EPDR1-201ENST00000199448 ADAMTS2O95450 1211 aa23■■□□□ 1.27
EPDR1-201ENST00000199448 SRGNP10124 158 aa23■■□□□ 1.27
EPDR1-201ENST00000199448 TXNRD1Q16881 649 aa23■■□□□ 1.27
EPDR1-201ENST00000199448 LRRC31Q6UY01 552 aa23■■□□□ 1.27
EPDR1-201ENST00000199448 LEKR1Q6ZMV7 388 aa23■■□□□ 1.27
EPDR1-201ENST00000199448 FBXO33Q7Z6M2 555 aa23■■□□□ 1.27
EPDR1-201ENST00000199448 HDAC7Q8WUI4 952 aa23■■□□□ 1.27
EPDR1-201ENST00000199448 PSMB7Q99436 277 aa23■■□□□ 1.27
EPDR1-201ENST00000199448 MAD2L2Q9UI95 211 aa23■■□□□ 1.27
EPDR1-201ENST00000199448 A0A1W2PQC6 194 aa23■■□□□ 1.27
EPDR1-201ENST00000199448 PAPD7Q5XG87 772 aaKnown RBP23■■□□□ 1.27
EPDR1-201ENST00000199448 FAM71BQ8TC56 605 aa23■■□□□ 1.27
EPDR1-201ENST00000199448 HPCAL4Q9UM19 191 aa23■■□□□ 1.27
EPDR1-201ENST00000199448 PSMA7O14818 248 aa22.99■■□□□ 1.27
EPDR1-201ENST00000199448 KCNQ2O43526 872 aa22.99■■□□□ 1.27
EPDR1-201ENST00000199448 RHOBTB3O94955 611 aa22.99■■□□□ 1.27
EPDR1-201ENST00000199448 EEF1GP26641 437 aaKnown RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms