RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 CYLC1P35663 651 aaPredicted RBP18.7■□□□□ 0.58
CTDP1-201ENST00000075430 USP5P45974 858 aa18.7■□□□□ 0.58
CTDP1-201ENST00000075430 CORO7P57737 925 aa18.7■□□□□ 0.58
CTDP1-201ENST00000075430 SECISBP2LQ93073 1101 aaKnown RBP18.7■□□□□ 0.58
CTDP1-201ENST00000075430 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.7■□□□□ 0.58
CTDP1-201ENST00000075430 ZHX3Q9H4I2 956 aa18.7■□□□□ 0.58
CTDP1-201ENST00000075430 HAUS4Q9H6D7 363 aa18.7■□□□□ 0.58
CTDP1-201ENST00000075430 CAPN6Q9Y6Q1 641 aa18.7■□□□□ 0.58
CTDP1-201ENST00000075430 MARF1Q9Y4F3 1742 aaKnown RBP18.7■□□□□ 0.58
CTDP1-201ENST00000075430 MAGEB6P1A0A0J9YX57 407 aa18.7■□□□□ 0.58
CTDP1-201ENST00000075430 PKN1Q16512 942 aa18.7■□□□□ 0.58
CTDP1-201ENST00000075430 NT5DC1Q5TFE4 455 aa18.7■□□□□ 0.58
CTDP1-201ENST00000075430 FBXL16Q8N461 479 aa18.7■□□□□ 0.58
CTDP1-201ENST00000075430 STX8Q9UNK0 236 aa18.7■□□□□ 0.58
CTDP1-201ENST00000075430 FAM237AA0A1B0GTK4 181 aa18.7■□□□□ 0.58
CTDP1-201ENST00000075430 RAD21O60216 631 aa18.7■□□□□ 0.58
CTDP1-201ENST00000075430 KIAA0754O94854 1291 aa18.7■□□□□ 0.58
CTDP1-201ENST00000075430 UQCRFS1P1P0C7P4 283 aa18.7■□□□□ 0.58
CTDP1-201ENST00000075430 GUCY1A3Q02108 690 aa18.7■□□□□ 0.58
CTDP1-201ENST00000075430 SLC20A2Q08357 652 aa18.7■□□□□ 0.58
CTDP1-201ENST00000075430 KLHL7Q8IXQ5 586 aa18.7■□□□□ 0.58
CTDP1-201ENST00000075430 LPIN2Q92539 896 aa18.7■□□□□ 0.58
CTDP1-201ENST00000075430 CYP19A1P11511 503 aaPredicted RBP18.69■□□□□ 0.58
CTDP1-201ENST00000075430 PBX1P40424 430 aa18.69■□□□□ 0.58
CTDP1-201ENST00000075430 SEC24CP53992 1094 aa18.69■□□□□ 0.58
CTDP1-201ENST00000075430 SPAG1Q07617 926 aa18.69■□□□□ 0.58
CTDP1-201ENST00000075430 ZSCAN10Q96SZ4 725 aaPredicted RBP18.69■□□□□ 0.58
CTDP1-201ENST00000075430 IFIH1Q9BYX4 1025 aaKnown RBP18.69■□□□□ 0.58
CTDP1-201ENST00000075430 EFCC1Q9HA90 598 aa18.69■□□□□ 0.58
CTDP1-201ENST00000075430 PPANQ9NQ55 473 aaKnown RBP18.69■□□□□ 0.58
CTDP1-201ENST00000075430 TBC1D7Q9P0N9 293 aa18.69■□□□□ 0.58
CTDP1-201ENST00000075430 PSMA7O14818 248 aa18.69■□□□□ 0.58
CTDP1-201ENST00000075430 LRRC41Q15345 812 aa18.69■□□□□ 0.58
CTDP1-201ENST00000075430 IL17AQ16552 155 aa18.69■□□□□ 0.58
CTDP1-201ENST00000075430 LETM2Q2VYF4 491 aa18.69■□□□□ 0.58
CTDP1-201ENST00000075430 RRAGAQ7L523 313 aa18.69■□□□□ 0.58
CTDP1-201ENST00000075430 SRBD1Q8N5C6 995 aaKnown RBP18.69■□□□□ 0.58
CTDP1-201ENST00000075430 SLIT3O75094 1523 aa18.69■□□□□ 0.58
CTDP1-201ENST00000075430 AMPD2Q01433 879 aa18.69■□□□□ 0.58
CTDP1-201ENST00000075430 RASSF7Q02833 373 aa18.69■□□□□ 0.58
CTDP1-201ENST00000075430 FAM182BQ5T319 152 aa18.69■□□□□ 0.58
CTDP1-201ENST00000075430 WDR59Q6PJI9 974 aa18.69■□□□□ 0.58
CTDP1-201ENST00000075430 TRAPPC11Q7Z392 1133 aa18.69■□□□□ 0.58
CTDP1-201ENST00000075430 RNF41Q9H4P4 317 aaPredicted RBP18.69■□□□□ 0.58
CTDP1-201ENST00000075430 DDB1Q16531 1140 aa18.68■□□□□ 0.58
CTDP1-201ENST00000075430 KAT2BQ92831 832 aa18.68■□□□□ 0.58
CTDP1-201ENST00000075430 GOLPH3Q9H4A6 298 aa18.68■□□□□ 0.58
CTDP1-201ENST00000075430 CDHR2Q9BYE9 1310 aa18.68■□□□□ 0.58
CTDP1-201ENST00000075430 TCRBV5S4A2TA0A5A2 114 aa18.68■□□□□ 0.58
CTDP1-201ENST00000075430 KRT83P78385 493 aa18.68■□□□□ 0.58
CTDP1-201ENST00000075430 CACNA2D4Q7Z3S7 1137 aa18.68■□□□□ 0.58
CTDP1-201ENST00000075430 JPH2Q9BR39 696 aaPredicted RBP18.68■□□□□ 0.58
CTDP1-201ENST00000075430 NFU1Q9UMS0 254 aa18.68■□□□□ 0.58
CTDP1-201ENST00000075430 FTCDO95954 541 aa18.67■□□□□ 0.58
CTDP1-201ENST00000075430 TRADDQ15628 312 aa18.67■□□□□ 0.58
CTDP1-201ENST00000075430 CCNI2Q6ZMN8 369 aaPredicted RBP18.67■□□□□ 0.58
CTDP1-201ENST00000075430 OTUD6BQ8N6M0 293 aa18.67■□□□□ 0.58
CTDP1-201ENST00000075430 TSEN2Q8NCE0 465 aaKnown RBP18.67■□□□□ 0.58
CTDP1-201ENST00000075430 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.67■□□□□ 0.58
CTDP1-201ENST00000075430 ODF2Q5BJF6 829 aa18.67■□□□□ 0.58
CTDP1-201ENST00000075430 CCDC43Q96MW1 224 aaKnown RBP18.67■□□□□ 0.58
CTDP1-201ENST00000075430 TMEM60Q9H2L4 133 aa18.67■□□□□ 0.58
CTDP1-201ENST00000075430 TFCP2L1Q9NZI6 479 aa18.67■□□□□ 0.58
CTDP1-201ENST00000075430 RWDD2AQ9UIY3 292 aa18.67■□□□□ 0.58
CTDP1-201ENST00000075430 GTPBP6O43824 516 aaPredicted RBP18.67■□□□□ 0.58
CTDP1-201ENST00000075430 GUCY2DQ02846 1103 aa18.67■□□□□ 0.58
CTDP1-201ENST00000075430 DTHD1Q6ZMT9 781 aa18.67■□□□□ 0.58
CTDP1-201ENST00000075430 IRF2BP1Q8IU81 584 aa18.67■□□□□ 0.58
CTDP1-201ENST00000075430 ZNF579Q8NAF0 562 aaKnown RBP18.67■□□□□ 0.58
CTDP1-201ENST00000075430 FERMT2Q96AC1 680 aa18.67■□□□□ 0.58
CTDP1-201ENST00000075430 LMO7Q8WWI1 1683 aa18.67■□□□□ 0.58
CTDP1-201ENST00000075430 HSF2BPO75031 334 aa18.66■□□□□ 0.58
CTDP1-201ENST00000075430 CKAP4Q07065 602 aaKnown RBP18.66■□□□□ 0.58
CTDP1-201ENST00000075430 ZNF658Q5TYW1 1059 aaPredicted RBP18.66■□□□□ 0.58
CTDP1-201ENST00000075430 CEP57Q86XR8 500 aa18.66■□□□□ 0.58
CTDP1-201ENST00000075430 CCDC51Q96ER9 411 aa18.66■□□□□ 0.58
CTDP1-201ENST00000075430 CNOT6LQ96LI5 555 aaKnown RBP18.66■□□□□ 0.58
CTDP1-201ENST00000075430 MYH10P35580 1976 aa18.66■□□□□ 0.58
CTDP1-201ENST00000075430 AGPSO00116 658 aa18.66■□□□□ 0.58
CTDP1-201ENST00000075430 CSF1RP07333 972 aa18.66■□□□□ 0.58
CTDP1-201ENST00000075430 PAFAH1B1P43034 410 aa18.66■□□□□ 0.58
CTDP1-201ENST00000075430 C8orf74Q6P047 294 aa18.66■□□□□ 0.58
CTDP1-201ENST00000075430 TMTC2Q8N394 836 aa18.66■□□□□ 0.58
CTDP1-201ENST00000075430 FRMD3A2A2Y4 597 aa18.66■□□□□ 0.58
CTDP1-201ENST00000075430 CCDC152Q4G0S7 254 aa18.66■□□□□ 0.58
CTDP1-201ENST00000075430 CAMTA1Q9Y6Y1 1673 aa18.65■□□□□ 0.58
CTDP1-201ENST00000075430 TACC1O75410 805 aa18.65■□□□□ 0.58
CTDP1-201ENST00000075430 EIF4A3P38919 411 aaKnown RBP18.65■□□□□ 0.58
CTDP1-201ENST00000075430 CRKLP46109 303 aaKnown RBP18.65■□□□□ 0.58
CTDP1-201ENST00000075430 STAG2Q8N3U4 1231 aa18.65■□□□□ 0.58
CTDP1-201ENST00000075430 RNF26Q9BY78 433 aaPredicted RBP18.65■□□□□ 0.58
CTDP1-201ENST00000075430 LIMA1Q9UHB6 759 aaKnown RBP18.65■□□□□ 0.58
CTDP1-201ENST00000075430 PDE6BP35913 854 aa18.65■□□□□ 0.58
CTDP1-201ENST00000075430 EPB41L5Q9HCM4 733 aa18.65■□□□□ 0.58
CTDP1-201ENST00000075430 EXOC1Q9NV70 894 aa18.65■□□□□ 0.58
CTDP1-201ENST00000075430 USO1O60763 962 aaKnown RBP18.65■□□□□ 0.58
CTDP1-201ENST00000075430 TECP42680 631 aa18.65■□□□□ 0.58
CTDP1-201ENST00000075430 MAGEA1P43355 309 aa18.65■□□□□ 0.58
CTDP1-201ENST00000075430 ACTN3Q08043 901 aaPredicted RBP18.65■□□□□ 0.58
CTDP1-201ENST00000075430 STK4Q13043 487 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms