RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Pcdhb22Q91XZ8 794 aa17.93■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Actn4P57780 912 aaKnown RBP17.92■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Gm14685Q52KH6 695 aa17.92■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Gm5169Q5M8P2 212 aa17.92■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Jarid2Q62315 1234 aa17.92■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Tpd52Q62393 224 aa17.92■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Csgalnact2Q8C1F4 542 aa17.92■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Ttc5Q99LG4 440 aa17.92■□□□□ 0.46
Col17a1-202ENSMUST00000086923 EhhadhQ9DBM2 718 aa17.92■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Trim37Q6PCX9 961 aa17.92■□□□□ 0.46
Col17a1-202ENSMUST00000086923 LpxnQ99N69 386 aa17.92■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Arl2bpQ9D385 163 aa17.92■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Fsip1Q9D3V5 435 aa17.92■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Alox15P39654 663 aa17.92■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Lrrc36Q3V0M2 755 aa17.92■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Sec63Q8VHE0 760 aaKnown RBP17.92■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Atp6v1b1Q91YH6 513 aa17.92■□□□□ 0.46
Col17a1-202ENSMUST00000086923 PogzQ8BZH4 1409 aaKnown RBP17.92■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Pla2g4aP47713 748 aa17.92■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Trim71Q1PSW8 855 aaKnown RBP17.92■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Hif1aQ61221 836 aaKnown RBP17.92■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Stx3Q64704 289 aa17.92■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Pabpc4Q6PHQ9 660 aaKnown RBP17.92■□□□□ 0.46
Col17a1-202ENSMUST00000086923 TwistnbQ78WZ7 330 aaKnown RBP17.92■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Scgb2b11A0A087WR49 112 aa17.92■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Gap43P06837 227 aa17.92■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Sox5P35710 763 aa17.92■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Myl10Q62082 202 aa17.92■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Slf1Q8R3P9 1054 aa17.92■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Mfap3lQ9D3X9 409 aa17.92■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Ap1b1O35643 943 aaKnown RBP17.91■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Tmod2Q9JKK7 351 aa17.91■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Taf7Q9R1C0 341 aa17.91■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Naip6Q9JIB6 1403 aa17.91■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Scgb2b18A0A087WPA9 112 aa17.91■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Armcx3Q8BHS6 379 aa17.91■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Eif3hQ91WK2 352 aaKnown RBP17.91■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Magi2Q9WVQ1 1275 aa17.91■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Zscan12Q9Z1D7 501 aa17.91■□□□□ 0.46
Col17a1-202ENSMUST00000086923 FscbA1EGX6 1074 aa17.91■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Elmsan1E9Q2I4 1089 aaKnown RBP17.91■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Xrcc5P27641 732 aa17.91■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Nop9Q8BMC4 636 aaKnown RBP17.91■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Dhx58Q99J87 678 aa17.91■□□□□ 0.46
Col17a1-202ENSMUST00000086923 IvlP48997 467 aa17.91■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Cabcoco1Q8CDT7 208 aa17.91■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Pcf11G3X9Z4 1553 aa17.91■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Tlk2O55047 718 aa17.9■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Krt13P08730 437 aa17.9■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Surf1P09925 306 aa17.9■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Rasgrf2P70392 1189 aa17.9■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Ctdspl2Q8BG15 465 aa17.9■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Ccdc68Q8BVC4 333 aa17.9■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Tdrd7Q8K1H1 1086 aaKnown RBP17.9■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Spdl1Q923A2 608 aa17.9■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Ubxn11Q9D572 484 aa17.9■□□□□ 0.46
Col17a1-202ENSMUST00000086923 FibpQ9JI19 357 aa17.9■□□□□ 0.46
Col17a1-202ENSMUST00000086923 LtkP08923 888 aa17.9■□□□□ 0.46
Col17a1-202ENSMUST00000086923 GsnP13020 780 aa17.9■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Cep70Q6IQY5 616 aa17.9■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Serpinb3dQ6UKZ0 387 aa17.9■□□□□ 0.46
Col17a1-202ENSMUST00000086923 ArpinQ9D0A3 226 aa17.9■□□□□ 0.46
Col17a1-202ENSMUST00000086923 PudpQ9D5U5 234 aa17.9■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Rps6ka2Q9WUT3 733 aa17.9■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Stk36Q69ZM6 1316 aa17.9■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Chil3O35744 398 aa17.9■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Zdhhc9P59268 364 aa17.9■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Pbxip1Q3TVI8 727 aa17.9■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Gucy2cQ3UWA6 1072 aa17.9■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Map3k10Q66L42 940 aa17.9■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Gimap6Q8K349 305 aa17.9■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Dbndd2Q9CRD4 158 aa17.9■□□□□ 0.46
Col17a1-202ENSMUST00000086923 GgcxQ9QYC7 757 aa17.9■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Angptl2Q9R045 493 aa17.9■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Noc2lQ9WV70 747 aaKnown RBP17.9■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Fam135aQ6NS59 1506 aa17.9■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Idi2Q8BFZ6 227 aa17.9■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Mtrf1lQ8BJU9 373 aa17.9■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Ap2b1Q9DBG3 937 aa17.9■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Gna11P21278 359 aa17.89■□□□□ 0.46
Col17a1-202ENSMUST00000086923 H2afxP27661 143 aaKnown RBP17.89■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Tfcp2Q9ERA0 502 aa17.89■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Lzts1P60853 599 aa17.89■□□□□ 0.45
Col17a1-202ENSMUST00000086923 Olfm4Q3UZZ4 505 aa17.89■□□□□ 0.45
Col17a1-202ENSMUST00000086923 Satb1Q60611 764 aa17.89■□□□□ 0.45
Col17a1-202ENSMUST00000086923 Msl1Q6PDM1 616 aa17.89■□□□□ 0.45
Col17a1-202ENSMUST00000086923 Polr2fP61219 127 aa17.89■□□□□ 0.45
Col17a1-202ENSMUST00000086923 SrlQ7TQ48 910 aa17.89■□□□□ 0.45
Col17a1-202ENSMUST00000086923 Tceal1Q921P9 165 aa17.89■□□□□ 0.45
Col17a1-202ENSMUST00000086923 Def8Q99J78 448 aa17.89■□□□□ 0.45
Col17a1-202ENSMUST00000086923 Klf15Q9EPW2 415 aa17.89■□□□□ 0.45
Col17a1-202ENSMUST00000086923 Cabp5Q9JLK3 173 aa17.89■□□□□ 0.45
Col17a1-202ENSMUST00000086923 Gipc1Q9Z0G0 333 aa17.89■□□□□ 0.45
Col17a1-202ENSMUST00000086923 Mrpl40Q9Z2Q5 206 aa17.89■□□□□ 0.45
Col17a1-202ENSMUST00000086923 Mroh7A2AVR2 1279 aa17.89■□□□□ 0.45
Col17a1-202ENSMUST00000086923 Trpc6Q61143 930 aa17.88■□□□□ 0.45
Col17a1-202ENSMUST00000086923 Smg5Q6ZPY2 1017 aa17.88■□□□□ 0.45
Col17a1-202ENSMUST00000086923 NsmfQ99NF2 532 aa17.88■□□□□ 0.45
Col17a1-202ENSMUST00000086923 Rab34Q64008 259 aa17.88■□□□□ 0.45
Col17a1-202ENSMUST00000086923 Tor4aQ8BH02 426 aa17.88■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms