RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 TACC3Q9Y6A5 838 aa11.87□□□□□ -0.51
PHGDH-224ENST00000641711 NID2Q14112 1375 aa11.87□□□□□ -0.51
PHGDH-224ENST00000641711 MYPNQ86TC9 1320 aa11.86□□□□□ -0.51
PHGDH-224ENST00000641711 A0A0G2JMZ2 1700 aa11.86□□□□□ -0.51
PHGDH-224ENST00000641711 B4E1Z4 1266 aa11.86□□□□□ -0.51
PHGDH-224ENST00000641711 IGF2BP3O00425 579 aaKnown RBP eCLIP11.86□□□□□ -0.51
PHGDH-224ENST00000641711 KDM4AO75164 1064 aa11.86□□□□□ -0.51
PHGDH-224ENST00000641711 TOP1P11387 765 aaKnown RBP11.86□□□□□ -0.51
PHGDH-224ENST00000641711 EEF2P13639 858 aaKnown RBP11.86□□□□□ -0.51
PHGDH-224ENST00000641711 ADD1P35611 737 aaKnown RBP11.86□□□□□ -0.51
PHGDH-224ENST00000641711 SHROOM1Q2M3G4 852 aaPredicted RBP11.86□□□□□ -0.51
PHGDH-224ENST00000641711 STK11IPQ8N1F8 1099 aa11.86□□□□□ -0.51
PHGDH-224ENST00000641711 FAM43AQ8N2R8 423 aa11.86□□□□□ -0.51
PHGDH-224ENST00000641711 ANKS1AQ92625 1134 aa11.86□□□□□ -0.51
PHGDH-224ENST00000641711 ANP32BQ92688 251 aaKnown RBP11.86□□□□□ -0.51
PHGDH-224ENST00000641711 UBAC1Q9BSL1 405 aa11.86□□□□□ -0.51
PHGDH-224ENST00000641711 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.86□□□□□ -0.51
PHGDH-224ENST00000641711 RLFQ13129 1914 aa11.86□□□□□ -0.51
PHGDH-224ENST00000641711 A0A1W2PRG0 241 aa11.85□□□□□ -0.51
PHGDH-224ENST00000641711 ERICH2A1L162 156 aa11.85□□□□□ -0.51
PHGDH-224ENST00000641711 BTBD19C9JJ37 291 aa11.85□□□□□ -0.51
PHGDH-224ENST00000641711 CDKL5O76039 1030 aa11.85□□□□□ -0.51
PHGDH-224ENST00000641711 VCAM1P19320 739 aa11.85□□□□□ -0.51
PHGDH-224ENST00000641711 RCAN1P53805 252 aa11.85□□□□□ -0.51
PHGDH-224ENST00000641711 MKRN3Q13064 507 aaKnown RBP11.85□□□□□ -0.51
PHGDH-224ENST00000641711 TAF1CQ15572 869 aaPredicted RBP11.85□□□□□ -0.51
PHGDH-224ENST00000641711 FAM47AQ5JRC9 791 aa11.85□□□□□ -0.51
PHGDH-224ENST00000641711 RCSD1Q6JBY9 416 aa11.85□□□□□ -0.51
PHGDH-224ENST00000641711 FAM173BQ6P4H8 233 aa11.85□□□□□ -0.51
PHGDH-224ENST00000641711 GADL1Q6ZQY3 521 aa11.85□□□□□ -0.51
PHGDH-224ENST00000641711 CCDC84Q86UT8 332 aaPredicted RBP11.85□□□□□ -0.51
PHGDH-224ENST00000641711 SIAH1Q8IUQ4 282 aa11.85□□□□□ -0.51
PHGDH-224ENST00000641711 ACER1Q8TDN7 264 aa11.85□□□□□ -0.51
PHGDH-224ENST00000641711 SPATA32Q96LK8 384 aa11.85□□□□□ -0.51
PHGDH-224ENST00000641711 ZNF396Q96N95 335 aaPredicted RBP11.85□□□□□ -0.51
PHGDH-224ENST00000641711 ZSCAN10Q96SZ4 725 aaPredicted RBP11.85□□□□□ -0.51
PHGDH-224ENST00000641711 ZIC5Q96T25 663 aa11.85□□□□□ -0.51
PHGDH-224ENST00000641711 PTPN18Q99952 460 aa11.85□□□□□ -0.51
PHGDH-224ENST00000641711 LY9Q9HBG7 655 aa11.85□□□□□ -0.51
PHGDH-224ENST00000641711 ZFYVE28Q9HCC9 887 aa11.85□□□□□ -0.51
PHGDH-224ENST00000641711 EMILIN3Q9NT22 766 aa11.85□□□□□ -0.51
PHGDH-224ENST00000641711 RCOR1Q9UKL0 485 aa11.85□□□□□ -0.51
PHGDH-224ENST00000641711 NAP1L2Q9ULW6 460 aaPredicted RBP11.85□□□□□ -0.51
PHGDH-224ENST00000641711 TNKSO95271 1327 aa11.85□□□□□ -0.51
PHGDH-224ENST00000641711 USP17L15C9J2P7 530 aa11.84□□□□□ -0.51
PHGDH-224ENST00000641711 USP17L13C9JLJ4 530 aa11.84□□□□□ -0.51
PHGDH-224ENST00000641711 USP17L11C9JVI0 530 aa11.84□□□□□ -0.51
PHGDH-224ENST00000641711 USP17L18D6R9N7 530 aa11.84□□□□□ -0.51
PHGDH-224ENST00000641711 USP17L22D6RA61 530 aa11.84□□□□□ -0.51
PHGDH-224ENST00000641711 USP17L17D6RBQ6 530 aa11.84□□□□□ -0.51
PHGDH-224ENST00000641711 USP17L19D6RCP7 530 aa11.84□□□□□ -0.51
PHGDH-224ENST00000641711 USP17L20D6RJB6 530 aa11.84□□□□□ -0.51
PHGDH-224ENST00000641711 PDHXO00330 501 aa11.84□□□□□ -0.51
PHGDH-224ENST00000641711 OSBPP22059 807 aa11.84□□□□□ -0.51
PHGDH-224ENST00000641711 GCLCP48506 637 aaPredicted RBP11.84□□□□□ -0.51
PHGDH-224ENST00000641711 IRX3P78415 501 aaPredicted RBP11.84□□□□□ -0.51
PHGDH-224ENST00000641711 USP17L24Q0WX57 530 aa11.84□□□□□ -0.51
PHGDH-224ENST00000641711 UVSSAQ2YD98 709 aa11.84□□□□□ -0.51
PHGDH-224ENST00000641711 GPAT2Q6NUI2 795 aa11.84□□□□□ -0.51
PHGDH-224ENST00000641711 CPLX2Q6PUV4 134 aaKnown RBP11.84□□□□□ -0.51
PHGDH-224ENST00000641711 APOA5Q6Q788 366 aa11.84□□□□□ -0.51
PHGDH-224ENST00000641711 LBX2Q6XYB7 198 aa11.84□□□□□ -0.51
PHGDH-224ENST00000641711 TMTC2Q8N394 836 aa11.84□□□□□ -0.51
PHGDH-224ENST00000641711 FBXO18Q8NFZ0 1043 aa11.84□□□□□ -0.51
PHGDH-224ENST00000641711 NKX2-3Q8TAU0 364 aa11.84□□□□□ -0.51
PHGDH-224ENST00000641711 GMCL1Q96IK5 515 aa11.84□□□□□ -0.51
PHGDH-224ENST00000641711 FUCA2Q9BTY2 467 aa11.84□□□□□ -0.51
PHGDH-224ENST00000641711 IL17RBQ9NRM6 502 aa11.84□□□□□ -0.51
PHGDH-224ENST00000641711 ZSWIM5Q9P217 1185 aa11.84□□□□□ -0.51
PHGDH-224ENST00000641711 ORC3Q9UBD5 711 aaPredicted RBP11.84□□□□□ -0.51
PHGDH-224ENST00000641711 STX8Q9UNK0 236 aa11.84□□□□□ -0.51
PHGDH-224ENST00000641711 CPLX1O14810 134 aa11.83□□□□□ -0.52
PHGDH-224ENST00000641711 ZBTB43O43298 467 aa11.83□□□□□ -0.52
PHGDH-224ENST00000641711 PLA2G6O60733 806 aa11.83□□□□□ -0.52
PHGDH-224ENST00000641711 FDX1P10109 184 aa11.83□□□□□ -0.52
PHGDH-224ENST00000641711 METAP2P50579 478 aaKnown RBP eCLIP11.83□□□□□ -0.521e-10■■■□□ 15.8
PHGDH-224ENST00000641711 ATP2B2Q01814 1243 aa11.83□□□□□ -0.52
PHGDH-224ENST00000641711 TMEM67Q5HYA8 995 aa11.83□□□□□ -0.52
PHGDH-224ENST00000641711 CLEC10AQ8IUN9 316 aa11.83□□□□□ -0.52
PHGDH-224ENST00000641711 MB21D1Q8N884 522 aa11.83□□□□□ -0.52
PHGDH-224ENST00000641711 ENAHQ8N8S7 591 aaPredicted RBP11.83□□□□□ -0.52
PHGDH-224ENST00000641711 DCAF4Q8WV16 495 aa11.83□□□□□ -0.52
PHGDH-224ENST00000641711 PGBD1Q96JS3 809 aa11.83□□□□□ -0.52
PHGDH-224ENST00000641711 PDLIM2Q96JY6 352 aa11.83□□□□□ -0.52
PHGDH-224ENST00000641711 C8orf76Q96K31 380 aa11.83□□□□□ -0.52
PHGDH-224ENST00000641711 INCENPQ9NQS7 918 aa11.83□□□□□ -0.52
PHGDH-224ENST00000641711 DDX19AQ9NUU7 478 aaKnown RBP11.83□□□□□ -0.52
PHGDH-224ENST00000641711 RNF186Q9NXI6 227 aa11.83□□□□□ -0.52
PHGDH-224ENST00000641711 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.83□□□□□ -0.52
PHGDH-224ENST00000641711 TFIP11Q9UBB9 837 aaKnown RBP11.83□□□□□ -0.52
PHGDH-224ENST00000641711 CLIP2Q9UDT6 1046 aa11.83□□□□□ -0.52
PHGDH-224ENST00000641711 ADGRA2Q96PE1 1338 aa11.83□□□□□ -0.52
PHGDH-224ENST00000641711 STK36Q9NRP7 1315 aa11.83□□□□□ -0.52
PHGDH-224ENST00000641711 F5H6K3 240 aa11.82□□□□□ -0.52
PHGDH-224ENST00000641711 TLR2O60603 784 aa11.82□□□□□ -0.52
PHGDH-224ENST00000641711 NDUFB10O96000 172 aa11.82□□□□□ -0.52
PHGDH-224ENST00000641711 SNHG28P0DPA3 235 aa11.82□□□□□ -0.52
PHGDH-224ENST00000641711 CTCFP49711 727 aaPredicted RBP11.82□□□□□ -0.52
PHGDH-224ENST00000641711 KLRC3Q07444 240 aa11.82□□□□□ -0.52
PHGDH-224ENST00000641711 SEC23AQ15436 765 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms