RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-209ENST00000640554 INHAP05111 366 aa16.75■□□□□ 0.27
SDHD-209ENST00000640554 GJB1P08034 283 aa16.75■□□□□ 0.27
SDHD-209ENST00000640554 CYP21A2P08686 494 aa16.75■□□□□ 0.27
SDHD-209ENST00000640554 ELNP15502 786 aa16.75■□□□□ 0.27
SDHD-209ENST00000640554 ZKSCAN1P17029 563 aaPredicted RBP16.75■□□□□ 0.27
SDHD-209ENST00000640554 IKQ13123 557 aaPredicted RBP16.75■□□□□ 0.27
SDHD-209ENST00000640554 GPATCH4Q5T3I0 446 aaKnown RBP16.75■□□□□ 0.27
SDHD-209ENST00000640554 BTNL9Q6UXG8 535 aa16.75■□□□□ 0.27
SDHD-209ENST00000640554 RALYLQ86SE5 291 aaKnown RBP16.75■□□□□ 0.27
SDHD-209ENST00000640554 DPP9Q86TI2 863 aa16.75■□□□□ 0.27
SDHD-209ENST00000640554 FBXO40Q9UH90 709 aa16.75■□□□□ 0.27
SDHD-209ENST00000640554 ISY1Q9ULR0 285 aaKnown RBP16.75■□□□□ 0.27
SDHD-209ENST00000640554 CCL5P13501 91 aa16.74■□□□□ 0.27
SDHD-209ENST00000640554 NCOA7Q8NI08 942 aa16.74■□□□□ 0.27
SDHD-209ENST00000640554 MTA3Q9BTC8 594 aa16.74■□□□□ 0.27
SDHD-209ENST00000640554 LSG1Q9H089 658 aaKnown RBP16.74■□□□□ 0.27
SDHD-209ENST00000640554 RNF208Q9H0X6 261 aa16.74■□□□□ 0.27
SDHD-209ENST00000640554 KAT14Q9H8E8 782 aa16.74■□□□□ 0.27
SDHD-209ENST00000640554 RBM8AQ9Y5S9 174 aaKnown RBP16.74■□□□□ 0.27
SDHD-209ENST00000640554 RPTORQ8N122 1335 aa16.73■□□□□ 0.27
SDHD-209ENST00000640554 SNHG28P0DPA3 235 aa16.73■□□□□ 0.27
SDHD-209ENST00000640554 ADORA2AP29274 412 aa16.73■□□□□ 0.27
SDHD-209ENST00000640554 KCTD2Q14681 263 aa16.73■□□□□ 0.27
SDHD-209ENST00000640554 SART3Q15020 963 aaKnown RBP16.73■□□□□ 0.27
SDHD-209ENST00000640554 MTFR1Q15390 333 aa16.73■□□□□ 0.27
SDHD-209ENST00000640554 CCDC96Q2M329 555 aa16.73■□□□□ 0.27
SDHD-209ENST00000640554 TKFCQ3LXA3 575 aa16.73■□□□□ 0.27
SDHD-209ENST00000640554 RNF20Q5VTR2 975 aa16.73■□□□□ 0.27
SDHD-209ENST00000640554 MFSD14CQ5VZR4 134 aa16.73■□□□□ 0.27
SDHD-209ENST00000640554 KCTD1Q719H9 257 aa16.73■□□□□ 0.27
SDHD-209ENST00000640554 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.73■□□□□ 0.27
SDHD-209ENST00000640554 CHST13Q8NET6 341 aa16.73■□□□□ 0.27
SDHD-209ENST00000640554 HMX1Q9NP08 348 aaPredicted RBP16.73■□□□□ 0.27
SDHD-209ENST00000640554 ANO2Q9NQ90 1003 aa16.73■□□□□ 0.27
SDHD-209ENST00000640554 DIS3Q9Y2L1 958 aaKnown RBP16.73■□□□□ 0.27
SDHD-209ENST00000640554 ERICH2A1L162 156 aa16.72■□□□□ 0.27
SDHD-209ENST00000640554 E7EWF7 191 aa16.72■□□□□ 0.27
SDHD-209ENST00000640554 PDHBP11177 359 aa16.72■□□□□ 0.27
SDHD-209ENST00000640554 GJA8P48165 433 aa16.72■□□□□ 0.27
SDHD-209ENST00000640554 MAP3K21Q5TCX8 1036 aa16.72■□□□□ 0.27
SDHD-209ENST00000640554 OLFML2BQ68BL8 750 aa16.72■□□□□ 0.27
SDHD-209ENST00000640554 SNRNP48Q6IEG0 339 aaKnown RBP16.72■□□□□ 0.27
SDHD-209ENST00000640554 ENAHQ8N8S7 591 aaPredicted RBP16.72■□□□□ 0.27
SDHD-209ENST00000640554 PNMA1Q8ND90 353 aa16.72■□□□□ 0.27
SDHD-209ENST00000640554 MMP19Q99542 508 aa16.72■□□□□ 0.27
SDHD-209ENST00000640554 ZKSCAN3Q9BRR0 538 aa16.72■□□□□ 0.27
SDHD-209ENST00000640554 TNKSO95271 1327 aa16.71■□□□□ 0.27
SDHD-209ENST00000640554 MGAMO43451 1857 aa16.71■□□□□ 0.27
SDHD-209ENST00000640554 POTEFA5A3E0 1075 aa16.71■□□□□ 0.27
SDHD-209ENST00000640554 ZNF543Q08ER8 600 aa16.71■□□□□ 0.27
SDHD-209ENST00000640554 NECTIN1Q15223 517 aa16.71■□□□□ 0.27
SDHD-209ENST00000640554 IFIT1BQ5T764 474 aaKnown RBP16.71■□□□□ 0.27
SDHD-209ENST00000640554 CPXCR1Q8N123 301 aa16.71■□□□□ 0.27
SDHD-209ENST00000640554 TRIB2Q92519 343 aa16.71■□□□□ 0.27
SDHD-209ENST00000640554 PAK6Q9NQU5 681 aaPredicted RBP16.71■□□□□ 0.27
SDHD-209ENST00000640554 PRR12Q9ULL5 1215 aa16.71■□□□□ 0.27
SDHD-209ENST00000640554 HTTP42858 3142 aa16.7■□□□□ 0.26
SDHD-209ENST00000640554 SGPL1O95470 568 aa16.7■□□□□ 0.26
SDHD-209ENST00000640554 ASPRV1Q53RT3 343 aa16.7■□□□□ 0.26
SDHD-209ENST00000640554 SYDE2Q5VT97 1194 aa16.7■□□□□ 0.26
SDHD-209ENST00000640554 SKAP1Q86WV1 359 aa16.7■□□□□ 0.26
SDHD-209ENST00000640554 TMTC2Q8N394 836 aa16.7■□□□□ 0.26
SDHD-209ENST00000640554 UNC93B1Q9H1C4 597 aa16.7■□□□□ 0.26
SDHD-209ENST00000640554 RAVER2Q9HCJ3 691 aaKnown RBP16.7■□□□□ 0.26
SDHD-209ENST00000640554 MTMR7Q9Y216 660 aa16.7■□□□□ 0.26
SDHD-209ENST00000640554 RLFQ13129 1914 aa16.7■□□□□ 0.26
SDHD-209ENST00000640554 ZSWIM8A7E2V4 1837 aa16.7■□□□□ 0.26
SDHD-209ENST00000640554 IFIT3O14879 490 aaKnown RBP16.69■□□□□ 0.26
SDHD-209ENST00000640554 MYCP01106 439 aaPredicted RBP16.69■□□□□ 0.26
SDHD-209ENST00000640554 PRKAR2AP13861 404 aaKnown RBP16.69■□□□□ 0.26
SDHD-209ENST00000640554 EN2P19622 333 aaPredicted RBP16.69■□□□□ 0.26
SDHD-209ENST00000640554 SEC23AQ15436 765 aa16.69■□□□□ 0.26
SDHD-209ENST00000640554 MSL3Q8N5Y2 521 aaKnown RBP16.69■□□□□ 0.26
SDHD-209ENST00000640554 U2AF1L4Q8WU68 220 aaKnown RBP16.69■□□□□ 0.26
SDHD-209ENST00000640554 DDX11Q96FC9 970 aa16.69■□□□□ 0.26
SDHD-209ENST00000640554 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.69■□□□□ 0.26
SDHD-209ENST00000640554 RANBP17Q9H2T7 1088 aaKnown RBP16.69■□□□□ 0.26
SDHD-209ENST00000640554 GPCPD1Q9NPB8 672 aa16.69■□□□□ 0.26
SDHD-209ENST00000640554 NRBP1Q9UHY1 535 aa16.69■□□□□ 0.26
SDHD-209ENST00000640554 A0A0G2JMZ2 1700 aa16.69■□□□□ 0.26
SDHD-209ENST00000640554 SLC27A2O14975 620 aa16.68■□□□□ 0.26
SDHD-209ENST00000640554 EPB41L2O43491 1005 aaKnown RBP16.68■□□□□ 0.26
SDHD-209ENST00000640554 MSCO60682 206 aa16.68■□□□□ 0.26
SDHD-209ENST00000640554 COBLO75128 1261 aa16.68■□□□□ 0.26
SDHD-209ENST00000640554 REC8O95072 547 aa16.68■□□□□ 0.26
SDHD-209ENST00000640554 IGHA2P01877 340 aa16.68■□□□□ 0.26
SDHD-209ENST00000640554 ICAM1P05362 532 aa16.68■□□□□ 0.26
SDHD-209ENST00000640554 CACNB2Q08289 660 aaPredicted RBP16.68■□□□□ 0.26
SDHD-209ENST00000640554 TSGA10IPQ3SY00 556 aa16.68■□□□□ 0.26
SDHD-209ENST00000640554 CREB3L3Q68CJ9 461 aa16.68■□□□□ 0.26
SDHD-209ENST00000640554 CYB5R4Q7L1T6 521 aa16.68■□□□□ 0.26
SDHD-209ENST00000640554 NPLOC4Q8TAT6 608 aa16.68■□□□□ 0.26
SDHD-209ENST00000640554 MAF1Q9H063 256 aa16.68■□□□□ 0.26
SDHD-209ENST00000640554 ACAD9Q9H845 621 aa16.68■□□□□ 0.26
SDHD-209ENST00000640554 RIPK3Q9Y572 518 aa16.68■□□□□ 0.26
SDHD-209ENST00000640554 MYH4Q9Y623 1939 aa16.67■□□□□ 0.26
SDHD-209ENST00000640554 TFRCP02786 760 aaKnown RBP16.67■□□□□ 0.26
SDHD-209ENST00000640554 PARP1P09874 1014 aaKnown RBP16.67■□□□□ 0.26
SDHD-209ENST00000640554 MCM5P33992 734 aa16.67■□□□□ 0.26
SDHD-209ENST00000640554 KRT32Q14532 448 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms