RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 BLZF1Q9H2G9 400 aa16.4■□□□□ 0.22
CLN6-215ENST00000636674 PUF60Q9UHX1 559 aaKnown RBP16.4■□□□□ 0.22
CLN6-215ENST00000636674 ZNF831Q5JPB2 1677 aa16.4■□□□□ 0.22
CLN6-215ENST00000636674 CCDC88AQ3V6T2 1871 aa16.4■□□□□ 0.22
CLN6-215ENST00000636674 A0A1W2PQC6 194 aa16.4■□□□□ 0.22
CLN6-215ENST00000636674 H7C1D1 291 aa16.4■□□□□ 0.22
CLN6-215ENST00000636674 NLRP5P59047 1200 aa16.4■□□□□ 0.22
CLN6-215ENST00000636674 ST5P78524 1137 aa16.4■□□□□ 0.22
CLN6-215ENST00000636674 SF3B3Q15393 1217 aaKnown RBP16.4■□□□□ 0.22
CLN6-215ENST00000636674 CAVIN4Q5BKX8 364 aa16.4■□□□□ 0.22
CLN6-215ENST00000636674 PIK3AP1Q6ZUJ8 805 aa16.4■□□□□ 0.22
CLN6-215ENST00000636674 HDXQ7Z353 690 aa16.4■□□□□ 0.22
CLN6-215ENST00000636674 C4orf32Q8N8J7 132 aa16.4■□□□□ 0.22
CLN6-215ENST00000636674 PNKPQ96T60 521 aa16.4■□□□□ 0.22
CLN6-215ENST00000636674 GBP3Q9H0R5 595 aa16.4■□□□□ 0.22
CLN6-215ENST00000636674 SH3GLB2Q9NR46 395 aa16.4■□□□□ 0.22
CLN6-215ENST00000636674 BSDC1Q9NW68 430 aaPredicted RBP16.4■□□□□ 0.22
CLN6-215ENST00000636674 TULP2O00295 520 aa16.39■□□□□ 0.21
CLN6-215ENST00000636674 MYL1P05976 194 aa16.39■□□□□ 0.21
CLN6-215ENST00000636674 HNRNPH2P55795 449 aaKnown RBP16.39■□□□□ 0.21
CLN6-215ENST00000636674 KCNB1Q14721 858 aa16.39■□□□□ 0.21
CLN6-215ENST00000636674 SBK1Q52WX2 424 aa16.39■□□□□ 0.21
CLN6-215ENST00000636674 ZNF662Q6ZS27 426 aa16.39■□□□□ 0.21
CLN6-215ENST00000636674 ANKRD18AQ8IVF6 992 aa16.39■□□□□ 0.21
CLN6-215ENST00000636674 STAMQ92783 540 aa16.39■□□□□ 0.21
CLN6-215ENST00000636674 NUP88Q99567 741 aaPredicted RBP16.39■□□□□ 0.21
CLN6-215ENST00000636674 TAB2Q9NYJ8 693 aa16.39■□□□□ 0.21
CLN6-215ENST00000636674 L1RE1Q9UN81 338 aa16.39■□□□□ 0.21
CLN6-215ENST00000636674 MYH1P12882 1939 aa16.39■□□□□ 0.21
CLN6-215ENST00000636674 CTAGE15A4D2H0 777 aa16.38■□□□□ 0.21
CLN6-215ENST00000636674 USP17L12C9JPN9 530 aa16.38■□□□□ 0.21
CLN6-215ENST00000636674 USP17L21D6R901 530 aa16.38■□□□□ 0.21
CLN6-215ENST00000636674 H3BQF6 201 aa16.38■□□□□ 0.21
CLN6-215ENST00000636674 RNF225M0QZC1 329 aaPredicted RBP16.38■□□□□ 0.21
CLN6-215ENST00000636674 CTAGE8P0CG41 777 aa16.38■□□□□ 0.21
CLN6-215ENST00000636674 KRT9P35527 623 aa16.38■□□□□ 0.21
CLN6-215ENST00000636674 CTAGE6Q86UF2 777 aa16.38■□□□□ 0.21
CLN6-215ENST00000636674 CTAGE4Q8IX94 777 aa16.38■□□□□ 0.21
CLN6-215ENST00000636674 VPS16Q9H269 839 aa16.38■□□□□ 0.21
CLN6-215ENST00000636674 ZSWIM4Q9H7M6 989 aa16.38■□□□□ 0.21
CLN6-215ENST00000636674 ZCCHC17Q9NP64 241 aaKnown RBP16.38■□□□□ 0.21
CLN6-215ENST00000636674 ARPP21Q9UBL0 812 aaPredicted RBP16.38■□□□□ 0.21
CLN6-215ENST00000636674 LGALS16A8MUM7 142 aa16.38■□□□□ 0.21
CLN6-215ENST00000636674 TAF1P21675 1872 aa16.38■□□□□ 0.21
CLN6-215ENST00000636674 EEF1GP26641 437 aaKnown RBP16.38■□□□□ 0.21
CLN6-215ENST00000636674 KIF5BP33176 963 aa16.38■□□□□ 0.21
CLN6-215ENST00000636674 MCM7P33993 719 aa16.38■□□□□ 0.21
CLN6-215ENST00000636674 SF3B2Q13435 895 aaKnown RBP16.38■□□□□ 0.21
CLN6-215ENST00000636674 ADSSL1Q8N142 457 aa16.38■□□□□ 0.21
CLN6-215ENST00000636674 NSUN4Q96CB9 384 aaKnown RBP16.38■□□□□ 0.21
CLN6-215ENST00000636674 DNAJC7Q99615 494 aa16.38■□□□□ 0.21
CLN6-215ENST00000636674 DCP1AQ9NPI6 582 aaPredicted RBP16.38■□□□□ 0.21
CLN6-215ENST00000636674 DISC1Q9NRI5 854 aa16.38■□□□□ 0.21
CLN6-215ENST00000636674 ATP8A2Q9NTI2 1148 aa16.38■□□□□ 0.21
CLN6-215ENST00000636674 ZNF652Q9Y2D9 606 aa16.38■□□□□ 0.21
CLN6-215ENST00000636674 EIF3JO75822 258 aaKnown RBP16.37■□□□□ 0.21
CLN6-215ENST00000636674 ATP6V1AP38606 617 aa16.37■□□□□ 0.21
CLN6-215ENST00000636674 PRCPP42785 496 aa16.37■□□□□ 0.21
CLN6-215ENST00000636674 WWC2Q6AWC2 1192 aa16.37■□□□□ 0.21
CLN6-215ENST00000636674 WDR93Q6P2C0 686 aa16.37■□□□□ 0.21
CLN6-215ENST00000636674 FBXO33Q7Z6M2 555 aa16.37■□□□□ 0.21
CLN6-215ENST00000636674 IRF2BP1Q8IU81 584 aa16.37■□□□□ 0.21
CLN6-215ENST00000636674 NEK11Q8NG66 645 aa16.37■□□□□ 0.21
CLN6-215ENST00000636674 FAM84BQ96KN1 310 aaPredicted RBP16.37■□□□□ 0.21
CLN6-215ENST00000636674 CRNKL1Q9BZJ0 848 aaKnown RBP16.37■□□□□ 0.21
CLN6-215ENST00000636674 LOC102724428A0A0B4J2F2 783 aa16.36■□□□□ 0.21
CLN6-215ENST00000636674 PSMD14O00487 310 aa16.36■□□□□ 0.21
CLN6-215ENST00000636674 NDUFA10O95299 355 aa16.36■□□□□ 0.21
CLN6-215ENST00000636674 CDC25AP30304 524 aa16.36■□□□□ 0.21
CLN6-215ENST00000636674 SIK1P57059 783 aa16.36■□□□□ 0.21
CLN6-215ENST00000636674 CLEC4GQ6UXB4 293 aa16.36■□□□□ 0.21
CLN6-215ENST00000636674 BLIDQ8IZY5 108 aa16.36■□□□□ 0.21
CLN6-215ENST00000636674 MARCH10Q8NA82 808 aaPredicted RBP16.36■□□□□ 0.21
CLN6-215ENST00000636674 ZNF507Q8TCN5 953 aa16.36■□□□□ 0.21
CLN6-215ENST00000636674 THAP9Q9H5L6 903 aa16.36■□□□□ 0.21
CLN6-215ENST00000636674 HAUS4Q9H6D7 363 aa16.36■□□□□ 0.21
CLN6-215ENST00000636674 ADAM21Q9UKJ8 722 aa16.36■□□□□ 0.21
CLN6-215ENST00000636674 MYO6Q9UM54 1294 aa16.36■□□□□ 0.21
CLN6-215ENST00000636674 REXO2Q9Y3B8 237 aaKnown RBP16.36■□□□□ 0.21
CLN6-215ENST00000636674 EPN1Q9Y6I3 576 aaPredicted RBP16.36■□□□□ 0.21
CLN6-215ENST00000636674 M0R2N6 131 aa16.36■□□□□ 0.21
CLN6-215ENST00000636674 ABL1P00519 1130 aa16.36■□□□□ 0.21
CLN6-215ENST00000636674 PARP1P09874 1014 aaKnown RBP16.36■□□□□ 0.21
CLN6-215ENST00000636674 GTF2E1P29083 439 aaPredicted RBP16.36■□□□□ 0.21
CLN6-215ENST00000636674 STAT6P42226 847 aa16.36■□□□□ 0.21
CLN6-215ENST00000636674 ITPK1Q13572 414 aa16.36■□□□□ 0.21
CLN6-215ENST00000636674 RCSD1Q6JBY9 416 aa16.36■□□□□ 0.21
CLN6-215ENST00000636674 TRAPPC11Q7Z392 1133 aa16.36■□□□□ 0.21
CLN6-215ENST00000636674 MB21D1Q8N884 522 aa16.36■□□□□ 0.21
CLN6-215ENST00000636674 DAGLBQ8NCG7 672 aa16.36■□□□□ 0.21
CLN6-215ENST00000636674 OR8K1Q8NGG5 319 aa16.36■□□□□ 0.21
CLN6-215ENST00000636674 PCDHA4Q9UN74 947 aa16.36■□□□□ 0.21
CLN6-215ENST00000636674 MINPP1Q9UNW1 487 aa16.36■□□□□ 0.21
CLN6-215ENST00000636674 GDAQ9Y2T3 454 aa16.36■□□□□ 0.21
CLN6-215ENST00000636674 VSNL1P62760 191 aa16.35■□□□□ 0.21
CLN6-215ENST00000636674 UBXN1Q04323 297 aa16.35■□□□□ 0.21
CLN6-215ENST00000636674 NAALADL2Q58DX5 795 aa16.35■□□□□ 0.21
CLN6-215ENST00000636674 NOC3LQ8WTT2 800 aaKnown RBP16.35■□□□□ 0.21
CLN6-215ENST00000636674 ANKS1AQ92625 1134 aa16.35■□□□□ 0.21
CLN6-215ENST00000636674 SLF1Q9BQI6 1058 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms