RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 DNAJC18Q9H819 358 aa20.05■□□□□ 0.8
PCF11-207ENST00000624931 MYOZ2Q9NPC6 264 aa20.05■□□□□ 0.8
PCF11-207ENST00000624931 FAM217BQ9NTX9 383 aaPredicted RBP20.05■□□□□ 0.8
PCF11-207ENST00000624931 SCAF8Q9UPN6 1271 aaKnown RBP20.05■□□□□ 0.8
PCF11-207ENST00000624931 HPSEQ9Y251 543 aa20.05■□□□□ 0.8
PCF11-207ENST00000624931 SPDYE2Q495Y8 402 aa20.05■□□□□ 0.8
PCF11-207ENST00000624931 NUP133Q8WUM0 1156 aa20.05■□□□□ 0.8
PCF11-207ENST00000624931 VEZTQ9HBM0 779 aa20.05■□□□□ 0.8
PCF11-207ENST00000624931 SERPINB13Q9UIV8 391 aa20.05■□□□□ 0.8
PCF11-207ENST00000624931 CNTNAP1P78357 1384 aa20.04■□□□□ 0.8
PCF11-207ENST00000624931 HLA-DOAP06340 250 aa20.04■□□□□ 0.8
PCF11-207ENST00000624931 AKR1B1P15121 316 aa20.04■□□□□ 0.8
PCF11-207ENST00000624931 SHMT1P34896 483 aa20.04■□□□□ 0.8
PCF11-207ENST00000624931 UBASH3AP57075 661 aa20.04■□□□□ 0.8
PCF11-207ENST00000624931 MICALL2Q8IY33 904 aa20.04■□□□□ 0.8
PCF11-207ENST00000624931 UBXN4Q92575 508 aa20.04■□□□□ 0.8
PCF11-207ENST00000624931 ZNF280AP59817 542 aaPredicted RBP20.03■□□□□ 0.8
PCF11-207ENST00000624931 SHROOM1Q2M3G4 852 aaPredicted RBP20.03■□□□□ 0.8
PCF11-207ENST00000624931 SAMD7Q7Z3H4 446 aa20.03■□□□□ 0.8
PCF11-207ENST00000624931 CLEC10AQ8IUN9 316 aa20.03■□□□□ 0.8
PCF11-207ENST00000624931 CDAN1Q8IWY9 1227 aa20.03■□□□□ 0.8
PCF11-207ENST00000624931 MTMR14Q8NCE2 650 aa20.03■□□□□ 0.8
PCF11-207ENST00000624931 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.03■□□□□ 0.8
PCF11-207ENST00000624931 TMOD2Q9NZR1 351 aa20.03■□□□□ 0.8
PCF11-207ENST00000624931 DNAI1Q9UI46 699 aa20.03■□□□□ 0.8
PCF11-207ENST00000624931 ASTN2O75129 1339 aaPredicted RBP20.03■□□□□ 0.8
PCF11-207ENST00000624931 EFCAB8A8MWE9 144 aa20.02■□□□□ 0.8
PCF11-207ENST00000624931 WNT10BO00744 389 aa20.02■□□□□ 0.8
PCF11-207ENST00000624931 CUTAO60888 179 aa20.02■□□□□ 0.8
PCF11-207ENST00000624931 RPS12P25398 132 aaKnown RBP20.02■□□□□ 0.8
PCF11-207ENST00000624931 CMTR1Q8N1G2 835 aaKnown RBP20.02■□□□□ 0.8
PCF11-207ENST00000624931 NID2Q14112 1375 aa20.02■□□□□ 0.8
PCF11-207ENST00000624931 UBE2Q2LH0YL09 131 aa20.02■□□□□ 0.79
PCF11-207ENST00000624931 ARHGAP6O43182 974 aa20.02■□□□□ 0.79
PCF11-207ENST00000624931 ENTPD3O75355 529 aa20.02■□□□□ 0.79
PCF11-207ENST00000624931 NPM3O75607 178 aaKnown RBP20.02■□□□□ 0.79
PCF11-207ENST00000624931 SERPINC1P01008 464 aa20.02■□□□□ 0.79
PCF11-207ENST00000624931 RTN1Q16799 776 aa20.02■□□□□ 0.79
PCF11-207ENST00000624931 TBC1D10BQ4KMP7 808 aaPredicted RBP20.02■□□□□ 0.79
PCF11-207ENST00000624931 TMCO3Q6UWJ1 677 aa20.02■□□□□ 0.79
PCF11-207ENST00000624931 VSTM4Q8IW00 320 aa20.02■□□□□ 0.79
PCF11-207ENST00000624931 MNS1Q8NEH6 495 aa20.02■□□□□ 0.79
PCF11-207ENST00000624931 PHKBQ93100 1093 aa20.02■□□□□ 0.79
PCF11-207ENST00000624931 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.02■□□□□ 0.79
PCF11-207ENST00000624931 ZNF287Q9HBT7 754 aa20.02■□□□□ 0.79
PCF11-207ENST00000624931 RNF181Q9P0P0 153 aa20.02■□□□□ 0.79
PCF11-207ENST00000624931 DACH1Q9UI36 760 aa20.02■□□□□ 0.79
PCF11-207ENST00000624931 TOP1P11387 765 aaKnown RBP20.01■□□□□ 0.79
PCF11-207ENST00000624931 RASGRP2Q7LDG7 609 aa20.01■□□□□ 0.79
PCF11-207ENST00000624931 TMTC2Q8N394 836 aa20.01■□□□□ 0.79
PCF11-207ENST00000624931 CRACR2BQ8N4Y2 399 aaPredicted RBP20.01■□□□□ 0.79
PCF11-207ENST00000624931 NEDD1Q8NHV4 660 aa20.01■□□□□ 0.79
PCF11-207ENST00000624931 EHD4Q9H223 541 aa20.01■□□□□ 0.79
PCF11-207ENST00000624931 CALCOCO1Q9P1Z2 691 aa20.01■□□□□ 0.79
PCF11-207ENST00000624931 CNOT7Q9UIV1 285 aaKnown RBP20.01■□□□□ 0.79
PCF11-207ENST00000624931 ATRNL1Q5VV63 1379 aa20.01■□□□□ 0.79
PCF11-207ENST00000624931 A0A087WWV3 80 aa20■□□□□ 0.79
PCF11-207ENST00000624931 NTRK3Q16288 839 aa20■□□□□ 0.79
PCF11-207ENST00000624931 ERCC6LQ2NKX8 1250 aa20■□□□□ 0.79
PCF11-207ENST00000624931 TEX35Q5T0J7 233 aa20■□□□□ 0.79
PCF11-207ENST00000624931 RESP18Q5W5W9 173 aa20■□□□□ 0.79
PCF11-207ENST00000624931 CATIPQ7Z7H3 387 aa20■□□□□ 0.79
PCF11-207ENST00000624931 ERCC4Q92889 916 aaPredicted RBP20■□□□□ 0.79
PCF11-207ENST00000624931 DHX36Q9H2U1 1008 aaKnown RBP20■□□□□ 0.79
PCF11-207ENST00000624931 TAOK2Q9UL54 1235 aa20■□□□□ 0.79
PCF11-207ENST00000624931 BIN1O00499 593 aa19.99■□□□□ 0.79
PCF11-207ENST00000624931 LMOD1P29536 600 aaPredicted RBP19.99■□□□□ 0.79
PCF11-207ENST00000624931 TRIM29Q14134 588 aa19.99■□□□□ 0.79
PCF11-207ENST00000624931 ARHGAP29Q52LW3 1261 aa19.99■□□□□ 0.79
PCF11-207ENST00000624931 FANCBQ8NB91 859 aa19.99■□□□□ 0.79
PCF11-207ENST00000624931 CEP95Q96GE4 821 aa19.99■□□□□ 0.79
PCF11-207ENST00000624931 AIFM3Q96NN9 605 aa19.99■□□□□ 0.79
PCF11-207ENST00000624931 ALG1Q9BT22 464 aa19.99■□□□□ 0.79
PCF11-207ENST00000624931 TMEM39BQ9GZU3 492 aa19.99■□□□□ 0.79
PCF11-207ENST00000624931 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.99■□□□□ 0.79
PCF11-207ENST00000624931 SWAP70Q9UH65 585 aa19.99■□□□□ 0.79
PCF11-207ENST00000624931 MTMR7Q9Y216 660 aa19.99■□□□□ 0.79
PCF11-207ENST00000624931 V9GYY5 206 aaPredicted RBP19.99■□□□□ 0.79
PCF11-207ENST00000624931 GREB1LQ9C091 1923 aaPredicted RBP19.99■□□□□ 0.79
PCF11-207ENST00000624931 COL2A1P02458 1487 aaPredicted RBP19.99■□□□□ 0.79
PCF11-207ENST00000624931 CLCN6P51797 869 aa19.99■□□□□ 0.79
PCF11-207ENST00000624931 TROAPQ12815 778 aa19.99■□□□□ 0.79
PCF11-207ENST00000624931 CT47A1Q5JQC4 288 aaPredicted RBP19.99■□□□□ 0.79
PCF11-207ENST00000624931 OTUD7BQ6GQQ9 843 aa19.99■□□□□ 0.79
PCF11-207ENST00000624931 WASF1Q92558 559 aa19.99■□□□□ 0.79
PCF11-207ENST00000624931 DPF2Q92785 391 aa19.99■□□□□ 0.79
PCF11-207ENST00000624931 CSRNP1Q96S65 589 aa19.99■□□□□ 0.79
PCF11-207ENST00000624931 KAT14Q9H8E8 782 aa19.99■□□□□ 0.79
PCF11-207ENST00000624931 TCP11L1Q9NUJ3 509 aa19.99■□□□□ 0.79
PCF11-207ENST00000624931 ZNF446Q9NWS9 450 aa19.99■□□□□ 0.79
PCF11-207ENST00000624931 PI4KBQ9UBF8 816 aa19.99■□□□□ 0.79
PCF11-207ENST00000624931 STX8Q9UNK0 236 aa19.99■□□□□ 0.79
PCF11-207ENST00000624931 PLIN4Q96Q06 1357 aa19.99■□□□□ 0.79
PCF11-207ENST00000624931 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.98■□□□□ 0.79
PCF11-207ENST00000624931 KIF28PB7ZC32 967 aa19.98■□□□□ 0.79
PCF11-207ENST00000624931 PLEKHA8P1O95397 391 aa19.98■□□□□ 0.79
PCF11-207ENST00000624931 GNL2Q13823 731 aaKnown RBP19.98■□□□□ 0.79
PCF11-207ENST00000624931 PTPAQ15257 358 aa19.98■□□□□ 0.79
PCF11-207ENST00000624931 TRIM65Q6PJ69 517 aa19.98■□□□□ 0.79
PCF11-207ENST00000624931 DGKHQ86XP1 1220 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms