RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 FAM81BQ96LP2 452 aa6.9□□□□□ -1.31
CDKL5-205ENST00000623535 MTRQ99707 1265 aa6.9□□□□□ -1.31
CDKL5-205ENST00000623535 USP40Q9NVE5 1235 aa6.9□□□□□ -1.31
CDKL5-205ENST00000623535 MYBL2P10244 700 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 ERCC3P19447 782 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 STX1AQ16623 288 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 TTBK2Q6IQ55 1244 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 APOL6Q9BWW8 343 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 SLC12A5Q9H2X9 1139 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 MEIS1O00470 390 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 SRGAP2CP0DJJ0 459 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 TMEM132BQ14DG7 1078 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 LETM2Q2VYF4 491 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 SLFN12Q8IYM2 578 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 TSC1Q92574 1164 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 RAPGEF1Q13905 1077 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 POSTNQ15063 836 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 PPP2R5BQ15173 497 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 ALDH1L2Q3SY69 923 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 KIAA1755Q5JYT7 1200 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 MAP3K21Q5TCX8 1036 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 SRRM1Q8IYB3 904 aaKnown RBP6.89□□□□□ -1.31
CDKL5-205ENST00000623535 BRPF3Q9ULD4 1205 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 SUGT1Q9Y2Z0 365 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 PRR16Q569H4 304 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 TRIM48Q8IWZ4 208 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 HDAC11Q96DB2 347 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 SUFUQ9UMX1 484 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 ANGEL1Q9UNK9 670 aaKnown RBP6.89□□□□□ -1.31
CDKL5-205ENST00000623535 DEUP1Q05D60 604 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 UBLCP1Q8WVY7 318 aaPredicted RBP6.89□□□□□ -1.31
CDKL5-205ENST00000623535 IFIH1Q9BYX4 1025 aaKnown RBP6.89□□□□□ -1.31
CDKL5-205ENST00000623535 SNRKQ9NRH2 765 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 C1orf112Q9NSG2 853 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 BNIP3LO60238 219 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 VAMP4O75379 141 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 ESRRBO95718 433 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 RSAD2Q8WXG1 361 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 PARK7Q99497 189 aaKnown RBP6.89□□□□□ -1.31
CDKL5-205ENST00000623535 EIF3CQ99613 913 aaKnown RBP6.89□□□□□ -1.31
CDKL5-205ENST00000623535 FOXP3Q9BZS1 431 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 IBTKQ9P2D0 1353 aaPredicted RBP6.89□□□□□ -1.31
CDKL5-205ENST00000623535 CCDC85CA6NKD9 419 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 KRT86O43790 486 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 BCAMP50895 628 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 TMCO5AQ8N6Q1 288 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 KIF18AQ8NI77 898 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 RABEP2Q9H5N1 569 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 LRRC4Q9HBW1 653 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 TOPORSQ9NS56 1045 aaPredicted RBP6.89□□□□□ -1.31
CDKL5-205ENST00000623535 NCOA1Q15788 1441 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 MAGI1Q96QZ7 1491 aaPredicted RBP6.89□□□□□ -1.31
CDKL5-205ENST00000623535 ZNF157P51786 506 aaPredicted RBP6.89□□□□□ -1.31
CDKL5-205ENST00000623535 GKAP1Q5VSY0 366 aaPredicted RBP6.89□□□□□ -1.31
CDKL5-205ENST00000623535 KAZNQ674X7 775 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 DSTYKQ6XUX3 929 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 FNBP4Q8N3X1 1017 aaPredicted RBP6.89□□□□□ -1.31
CDKL5-205ENST00000623535 OSCP1Q8WVF1 389 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 SENP1Q9P0U3 644 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 YTHDC2Q9H6S0 1430 aaKnown RBP6.89□□□□□ -1.31
CDKL5-205ENST00000623535 TCP10L2B9ZVM9 353 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 KATNAL1Q9BW62 490 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 MROH5Q6ZUA9 1318 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 MYO15BQ96JP2 1530 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 ALDH1L1O75891 902 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 MKRN3Q13064 507 aaKnown RBP6.89□□□□□ -1.31
CDKL5-205ENST00000623535 CERKLQ49MI3 558 aaPredicted RBP6.89□□□□□ -1.31
CDKL5-205ENST00000623535 SIX6OS1Q8N1H7 587 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 FSIP1Q8NA03 581 aa6.89□□□□□ -1.31
CDKL5-205ENST00000623535 RNASEH1O60930 286 aaKnown RBP6.88□□□□□ -1.31
CDKL5-205ENST00000623535 PMLP29590 882 aa6.88□□□□□ -1.31
CDKL5-205ENST00000623535 LACTBP83111 547 aaPredicted RBP6.88□□□□□ -1.31
CDKL5-205ENST00000623535 DDX53Q86TM3 631 aaKnown RBP6.88□□□□□ -1.31
CDKL5-205ENST00000623535 P3H4Q92791 437 aa6.88□□□□□ -1.31
CDKL5-205ENST00000623535 FAM102BQ5T8I3 360 aa6.88□□□□□ -1.31
CDKL5-205ENST00000623535 NCAPH2Q6IBW4 605 aa6.88□□□□□ -1.31
CDKL5-205ENST00000623535 COPS6Q7L5N1 327 aa6.88□□□□□ -1.31
CDKL5-205ENST00000623535 MYLK4Q86YV6 388 aaPredicted RBP6.88□□□□□ -1.31
CDKL5-205ENST00000623535 SMAP1Q8IYB5 467 aaPredicted RBP6.88□□□□□ -1.31
CDKL5-205ENST00000623535 MYCT1Q8N699 235 aa6.88□□□□□ -1.31
CDKL5-205ENST00000623535 DHX38Q92620 1227 aaKnown RBP6.88□□□□□ -1.31
CDKL5-205ENST00000623535 PTPRKQ15262 1439 aa6.88□□□□□ -1.31
CDKL5-205ENST00000623535 PSDA5PKW4 1024 aaPredicted RBP6.88□□□□□ -1.31
CDKL5-205ENST00000623535 EFCAB8A8MWE9 144 aa6.88□□□□□ -1.31
CDKL5-205ENST00000623535 GNL1P36915 607 aaPredicted RBP6.88□□□□□ -1.31
CDKL5-205ENST00000623535 CDKL2Q92772 493 aa6.88□□□□□ -1.31
CDKL5-205ENST00000623535 CCNT1O60563 726 aaKnown RBP6.88□□□□□ -1.31
CDKL5-205ENST00000623535 GRIN1Q05586 938 aa6.88□□□□□ -1.31
CDKL5-205ENST00000623535 FLIIQ13045 1269 aa6.88□□□□□ -1.31
CDKL5-205ENST00000623535 CAMK4Q16566 473 aa6.88□□□□□ -1.31
CDKL5-205ENST00000623535 CCDC62Q6P9F0 684 aa6.88□□□□□ -1.31
CDKL5-205ENST00000623535 PANK1Q8TE04 598 aa6.88□□□□□ -1.31
CDKL5-205ENST00000623535 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.88□□□□□ -1.31
CDKL5-205ENST00000623535 CCDC42Q96M95 316 aa6.88□□□□□ -1.31
CDKL5-205ENST00000623535 EPAS1Q99814 870 aa6.88□□□□□ -1.31
CDKL5-205ENST00000623535 COG4Q9H9E3 785 aa6.88□□□□□ -1.31
CDKL5-205ENST00000623535 LUC7L2Q9Y383 392 aaKnown RBP6.88□□□□□ -1.31
CDKL5-205ENST00000623535 P4HBP07237 508 aaKnown RBP6.88□□□□□ -1.31
CDKL5-205ENST00000623535 SYKP43405 635 aa6.88□□□□□ -1.31
CDKL5-205ENST00000623535 ALG1Q9BT22 464 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms