RNA–Protein interactions for RNA: ENST00000621973.1

DDX1-208, Transcript of DEAD-box helicase 1, humanhuman

TSL 5 BASIC

Gene DDX1, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-208ENST00000621973 CNTD1Q8N815 330 aa7.6□□□□□ -1.19
DDX1-208ENST00000621973 ANKRD24Q8TF21 1146 aa7.6□□□□□ -1.19
DDX1-208ENST00000621973 NELL1Q92832 810 aa7.6□□□□□ -1.19
DDX1-208ENST00000621973 NIFKQ9BYG3 293 aaKnown RBP7.6□□□□□ -1.19
DDX1-208ENST00000621973 RWDD1Q9H446 243 aaPredicted RBP7.6□□□□□ -1.19
DDX1-208ENST00000621973 ZBTB21Q9ULJ3 1066 aa7.6□□□□□ -1.19
DDX1-208ENST00000621973 DGKBQ9Y6T7 804 aa7.6□□□□□ -1.19
DDX1-208ENST00000621973 ZMYM3Q14202 1370 aa7.59□□□□□ -1.19
DDX1-208ENST00000621973 ANO9A1A5B4 782 aa7.59□□□□□ -1.19
DDX1-208ENST00000621973 PMM2O15305 246 aa7.59□□□□□ -1.19
DDX1-208ENST00000621973 GTF2A2P52657 109 aa7.59□□□□□ -1.19
DDX1-208ENST00000621973 RUFY4Q6ZNE9 571 aa7.59□□□□□ -1.19
DDX1-208ENST00000621973 DZIP1LQ8IYY4 767 aaKnown RBP7.59□□□□□ -1.19
DDX1-208ENST00000621973 NELL2Q99435 816 aa7.59□□□□□ -1.19
DDX1-208ENST00000621973 ZFYVE28Q9HCC9 887 aa7.59□□□□□ -1.19
DDX1-208ENST00000621973 FNIP2Q9P278 1114 aa7.59□□□□□ -1.19
DDX1-208ENST00000621973 POLKQ9UBT6 870 aa7.59□□□□□ -1.19
DDX1-208ENST00000621973 CPSF1Q10570 1443 aaKnown RBP7.59□□□□□ -1.19
DDX1-208ENST00000621973 DNAJC25-GNG10A0A024R161 153 aa7.59□□□□□ -1.2
DDX1-208ENST00000621973 TXLNAP40222 546 aa7.59□□□□□ -1.2
DDX1-208ENST00000621973 CCNFP41002 786 aa7.59□□□□□ -1.2
DDX1-208ENST00000621973 CXorf57Q6NSI4 855 aaKnown RBP7.59□□□□□ -1.2
DDX1-208ENST00000621973 DDX46Q7L014 1031 aaKnown RBP7.59□□□□□ -1.2
DDX1-208ENST00000621973 ZSCAN30Q86W11 494 aa7.59□□□□□ -1.2
DDX1-208ENST00000621973 RASSF3Q86WH2 238 aa7.59□□□□□ -1.2
DDX1-208ENST00000621973 EXOC2Q96KP1 924 aa7.59□□□□□ -1.2
DDX1-208ENST00000621973 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.59□□□□□ -1.25e-8■■□□□ 13.8
DDX1-208ENST00000621973 ANLNQ9NQW6 1124 aa7.59□□□□□ -1.2
DDX1-208ENST00000621973 LUC7L2Q9Y383 392 aaKnown RBP7.59□□□□□ -1.2
DDX1-208ENST00000621973 NRXN3Q9Y4C0 1643 aa7.58□□□□□ -1.2
DDX1-208ENST00000621973 A0A1W2PRQ8 180 aa7.58□□□□□ -1.2
DDX1-208ENST00000621973 CD2BP2O95400 341 aaKnown RBP7.58□□□□□ -1.2
DDX1-208ENST00000621973 LIG3P49916 1009 aa7.58□□□□□ -1.2
DDX1-208ENST00000621973 BIRC3Q13489 604 aa7.58□□□□□ -1.2
DDX1-208ENST00000621973 MLECQ14165 292 aa7.58□□□□□ -1.2
DDX1-208ENST00000621973 SNX29Q8TEQ0 813 aa7.58□□□□□ -1.2
DDX1-208ENST00000621973 SSH1Q8WYL5 1049 aa7.58□□□□□ -1.2
DDX1-208ENST00000621973 RSPH1Q8WYR4 309 aa7.58□□□□□ -1.2
DDX1-208ENST00000621973 RETREG1Q9H6L5 497 aa7.58□□□□□ -1.2
DDX1-208ENST00000621973 DMTF1Q9Y222 760 aa7.58□□□□□ -1.2
DDX1-208ENST00000621973 EDC4Q6P2E9 1401 aaKnown RBP7.58□□□□□ -1.2
DDX1-208ENST00000621973 UPK3BL1B0FP48 263 aa7.57□□□□□ -1.2
DDX1-208ENST00000621973 UPK3BL2E5RIL1 263 aa7.57□□□□□ -1.2
DDX1-208ENST00000621973 CELA3AP09093 270 aa7.57□□□□□ -1.2
DDX1-208ENST00000621973 MCM4P33991 863 aa7.57□□□□□ -1.2
DDX1-208ENST00000621973 TMPRSS15P98073 1019 aa7.57□□□□□ -1.2
DDX1-208ENST00000621973 FAM135BQ49AJ0 1406 aa7.57□□□□□ -1.2
DDX1-208ENST00000621973 LCE2DQ5TA82 110 aaPredicted RBP7.57□□□□□ -1.2
DDX1-208ENST00000621973 XKR5Q6UX68 686 aa7.57□□□□□ -1.2
DDX1-208ENST00000621973 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.57□□□□□ -1.2
DDX1-208ENST00000621973 FAM178BQ8IXR5 827 aa7.57□□□□□ -1.2
DDX1-208ENST00000621973 KIAA1958Q8N8K9 716 aa7.57□□□□□ -1.2
DDX1-208ENST00000621973 ZBTB38Q8NAP3 1195 aaPredicted RBP7.57□□□□□ -1.2
DDX1-208ENST00000621973 PI4K2BQ8TCG2 481 aa7.57□□□□□ -1.2
DDX1-208ENST00000621973 PGBD4Q96DM1 585 aa7.57□□□□□ -1.2
DDX1-208ENST00000621973 ZSCAN10Q96SZ4 725 aaPredicted RBP7.57□□□□□ -1.2
DDX1-208ENST00000621973 SPATA9Q9BWV2 254 aa7.57□□□□□ -1.2
DDX1-208ENST00000621973 RIC8AQ9NPQ8 531 aa7.57□□□□□ -1.2
DDX1-208ENST00000621973 LUC7LQ9NQ29 371 aaKnown RBP7.57□□□□□ -1.2
DDX1-208ENST00000621973 METP08581 1390 aa7.57□□□□□ -1.2
DDX1-208ENST00000621973 USP19O94966 1318 aa7.57□□□□□ -1.2
DDX1-208ENST00000621973 TECPR2O15040 1411 aa7.57□□□□□ -1.2
DDX1-208ENST00000621973 VIRMAQ69YN4 1812 aaKnown RBP7.57□□□□□ -1.2
DDX1-208ENST00000621973 TGFBR3LH3BV60 316 aa7.57□□□□□ -1.2
DDX1-208ENST00000621973 SYDE2Q5VT97 1194 aa7.57□□□□□ -1.2
DDX1-208ENST00000621973 RNF219Q5W0B1 726 aaPredicted RBP7.57□□□□□ -1.2
DDX1-208ENST00000621973 PKN3Q6P5Z2 889 aa7.57□□□□□ -1.2
DDX1-208ENST00000621973 IGF2-ASQ6U949 168 aa7.57□□□□□ -1.2
DDX1-208ENST00000621973 EPM2AIP1Q7L775 607 aaPredicted RBP7.57□□□□□ -1.2
DDX1-208ENST00000621973 EEPD1Q7L9B9 569 aa7.57□□□□□ -1.2
DDX1-208ENST00000621973 RHBDD1Q8TEB9 315 aa7.57□□□□□ -1.2
DDX1-208ENST00000621973 SNRNP27Q8WVK2 155 aaKnown RBP7.57□□□□□ -1.2
DDX1-208ENST00000621973 C7orf43Q8WVR3 580 aa7.57□□□□□ -1.2
DDX1-208ENST00000621973 SLC7A3Q8WY07 619 aa7.57□□□□□ -1.2
DDX1-208ENST00000621973 KIF2CQ99661 725 aa7.57□□□□□ -1.2
DDX1-208ENST00000621973 RUSC1Q9BVN2 902 aa7.57□□□□□ -1.2
DDX1-208ENST00000621973 LRRC4BQ9NT99 713 aa7.57□□□□□ -1.2
DDX1-208ENST00000621973 SMC4Q9NTJ3 1288 aa7.57□□□□□ -1.2
DDX1-208ENST00000621973 AATKQ6ZMQ8 1374 aa7.57□□□□□ -1.2
DDX1-208ENST00000621973 PPIP5K1Q6PFW1 1433 aa7.56□□□□□ -1.2
DDX1-208ENST00000621973 MEN1O00255 615 aa7.56□□□□□ -1.2
DDX1-208ENST00000621973 TFE3P19532 575 aaPredicted RBP7.56□□□□□ -1.2
DDX1-208ENST00000621973 GBX1Q14549 363 aa7.56□□□□□ -1.2
DDX1-208ENST00000621973 ABCB5Q2M3G0 1257 aa7.56□□□□□ -1.2
DDX1-208ENST00000621973 ATF7IPQ6VMQ6 1270 aa7.56□□□□□ -1.2
DDX1-208ENST00000621973 BNC2Q6ZN30 1099 aaPredicted RBP7.56□□□□□ -1.2
DDX1-208ENST00000621973 FTSJ3Q8IY81 847 aaKnown RBP7.56□□□□□ -1.2
DDX1-208ENST00000621973 NKAPQ8N5F7 415 aaKnown RBP7.56□□□□□ -1.2
DDX1-208ENST00000621973 NLRP3Q96P20 1036 aa7.56□□□□□ -1.2
DDX1-208ENST00000621973 KRTAP3-3Q9BYR6 98 aa7.56□□□□□ -1.2
DDX1-208ENST00000621973 KRTAP3-2Q9BYR7 98 aa7.56□□□□□ -1.2
DDX1-208ENST00000621973 SUV39H2Q9H5I1 410 aa7.56□□□□□ -1.2
DDX1-208ENST00000621973 CWC25Q9NXE8 425 aaPredicted RBP7.56□□□□□ -1.2
DDX1-208ENST00000621973 ZNRF3Q9ULT6 936 aa7.56□□□□□ -1.2
DDX1-208ENST00000621973 USP20Q9Y2K6 914 aa7.56□□□□□ -1.2
DDX1-208ENST00000621973 KNDC1Q76NI1 1749 aa7.56□□□□□ -1.2
DDX1-208ENST00000621973 IPO8O15397 1037 aaKnown RBP7.56□□□□□ -1.2
DDX1-208ENST00000621973 RPN1P04843 607 aaKnown RBP7.56□□□□□ -1.2
DDX1-208ENST00000621973 PHKG2P15735 406 aa7.56□□□□□ -1.2
DDX1-208ENST00000621973 SCP2P22307 547 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms