RNA–Protein interactions for RNA: ENST00000611412.4

VPS45-212, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 5 BASIC

Gene VPS45, Length 2,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-212ENST00000611412 PTPRFP10586 1907 aa13.83□□□□□ -0.2
VPS45-212ENST00000611412 FLOT1O75955 427 aa13.83□□□□□ -0.2
VPS45-212ENST00000611412 TAL1P17542 331 aaPredicted RBP13.83□□□□□ -0.2
VPS45-212ENST00000611412 STAT2P52630 851 aa13.83□□□□□ -0.2
VPS45-212ENST00000611412 AKAP17AQ02040 695 aaKnown RBP13.83□□□□□ -0.2
VPS45-212ENST00000611412 GUCY1B3Q02153 619 aa13.83□□□□□ -0.2
VPS45-212ENST00000611412 SYDE2Q5VT97 1194 aa13.83□□□□□ -0.2
VPS45-212ENST00000611412 OTUD7BQ6GQQ9 843 aa13.83□□□□□ -0.2
VPS45-212ENST00000611412 TRIM22Q8IYM9 498 aa13.83□□□□□ -0.2
VPS45-212ENST00000611412 LZTS2Q9BRK4 669 aa13.83□□□□□ -0.2
VPS45-212ENST00000611412 PRR12Q9ULL5 1215 aa13.83□□□□□ -0.2
VPS45-212ENST00000611412 PRPF3O43395 683 aaKnown RBP13.82□□□□□ -0.2
VPS45-212ENST00000611412 SNAPC2Q13487 334 aa13.82□□□□□ -0.2
VPS45-212ENST00000611412 MOGSQ13724 837 aa13.82□□□□□ -0.2
VPS45-212ENST00000611412 PKN1Q16512 942 aa13.82□□□□□ -0.2
VPS45-212ENST00000611412 GPKOWQ92917 476 aaPredicted RBP eCLIP13.82□□□□□ -0.2
VPS45-212ENST00000611412 SPZ1Q9BXG8 430 aa13.82□□□□□ -0.2
VPS45-212ENST00000611412 RNF26Q9BY78 433 aaPredicted RBP13.82□□□□□ -0.2
VPS45-212ENST00000611412 RIOX1Q9H6W3 641 aa13.82□□□□□ -0.2
VPS45-212ENST00000611412 HMGN5P82970 282 aaKnown RBP13.81□□□□□ -0.2
VPS45-212ENST00000611412 HTRA3P83110 453 aa13.81□□□□□ -0.2
VPS45-212ENST00000611412 PKP1Q13835 747 aa13.81□□□□□ -0.2
VPS45-212ENST00000611412 FOXD4L5Q5VV16 416 aaPredicted RBP13.81□□□□□ -0.2
VPS45-212ENST00000611412 FOXD4L4Q8WXT5 416 aaPredicted RBP13.81□□□□□ -0.2
VPS45-212ENST00000611412 ALG1Q9BT22 464 aa13.81□□□□□ -0.2
VPS45-212ENST00000611412 FEM1BQ9UK73 627 aa13.81□□□□□ -0.2
VPS45-212ENST00000611412 CCL15-CCL14A0A0B4J2E2 113 aa13.81□□□□□ -0.2
VPS45-212ENST00000611412 CCL15Q16663 113 aa13.81□□□□□ -0.2
VPS45-212ENST00000611412 CYP4F22Q6NT55 531 aa13.81□□□□□ -0.2
VPS45-212ENST00000611412 CCDC174Q6PII3 467 aa13.81□□□□□ -0.2
VPS45-212ENST00000611412 RRP36Q96EU6 259 aaKnown RBP13.81□□□□□ -0.2
VPS45-212ENST00000611412 MS4A4AQ96JQ5 239 aa13.81□□□□□ -0.2
VPS45-212ENST00000611412 STK36Q9NRP7 1315 aa13.81□□□□□ -0.2
VPS45-212ENST00000611412 DEXIO95424 95 aa13.8□□□□□ -0.2
VPS45-212ENST00000611412 CDC37Q16543 378 aaPredicted RBP13.8□□□□□ -0.2
VPS45-212ENST00000611412 LARP1BQ659C4 914 aaKnown RBP13.8□□□□□ -0.2
VPS45-212ENST00000611412 GPAT2Q6NUI2 795 aa13.8□□□□□ -0.2
VPS45-212ENST00000611412 BTNL9Q6UXG8 535 aa13.8□□□□□ -0.2
VPS45-212ENST00000611412 CATSPERGQ6ZRH7 1159 aa13.8□□□□□ -0.2
VPS45-212ENST00000611412 HEATR3Q7Z4Q2 680 aa13.8□□□□□ -0.2
VPS45-212ENST00000611412 CHURC1Q8WUH1 139 aa13.8□□□□□ -0.2
VPS45-212ENST00000611412 BRI3BPQ8WY22 251 aa13.8□□□□□ -0.2
VPS45-212ENST00000611412 SHISA4Q96DD7 197 aa13.8□□□□□ -0.2
VPS45-212ENST00000611412 ATG4CQ96DT6 458 aa13.8□□□□□ -0.2
VPS45-212ENST00000611412 SLF1Q9BQI6 1058 aa13.8□□□□□ -0.2
VPS45-212ENST00000611412 VPS54Q9P1Q0 977 aa13.8□□□□□ -0.2
VPS45-212ENST00000611412 SEC63Q9UGP8 760 aaKnown RBP13.8□□□□□ -0.2
VPS45-212ENST00000611412 LOC285556D6RIA3 1793 aa13.8□□□□□ -0.2
VPS45-212ENST00000611412 USP17L15C9J2P7 530 aa13.79□□□□□ -0.2
VPS45-212ENST00000611412 USP17L13C9JLJ4 530 aa13.79□□□□□ -0.2
VPS45-212ENST00000611412 USP17L11C9JVI0 530 aa13.79□□□□□ -0.2
VPS45-212ENST00000611412 USP17L18D6R9N7 530 aa13.79□□□□□ -0.2
VPS45-212ENST00000611412 USP17L22D6RA61 530 aa13.79□□□□□ -0.2
VPS45-212ENST00000611412 USP17L17D6RBQ6 530 aa13.79□□□□□ -0.2
VPS45-212ENST00000611412 USP17L19D6RCP7 530 aa13.79□□□□□ -0.2
VPS45-212ENST00000611412 USP17L20D6RJB6 530 aa13.79□□□□□ -0.2
VPS45-212ENST00000611412 PEX10O60683 326 aa13.79□□□□□ -0.2
VPS45-212ENST00000611412 PPP1R11O60927 126 aaPredicted RBP13.79□□□□□ -0.2
VPS45-212ENST00000611412 ZBTB48P10074 688 aaPredicted RBP13.79□□□□□ -0.2
VPS45-212ENST00000611412 SYT1P21579 422 aa13.79□□□□□ -0.2
VPS45-212ENST00000611412 APLP1P51693 650 aa13.79□□□□□ -0.2
VPS45-212ENST00000611412 GTF2A2P52657 109 aa13.79□□□□□ -0.2
VPS45-212ENST00000611412 USP17L24Q0WX57 530 aa13.79□□□□□ -0.2
VPS45-212ENST00000611412 QRICH1Q2TAL8 776 aa13.79□□□□□ -0.2
VPS45-212ENST00000611412 FAM160B2Q86V87 743 aa13.79□□□□□ -0.2
VPS45-212ENST00000611412 PROCA1Q8NCQ7 364 aaPredicted RBP13.79□□□□□ -0.2
VPS45-212ENST00000611412 COA7Q96BR5 231 aa13.79□□□□□ -0.2
VPS45-212ENST00000611412 MYH6P13533 1939 aa13.79□□□□□ -0.2
VPS45-212ENST00000611412 VPS37CA5D8V6 355 aaPredicted RBP13.79□□□□□ -0.2
VPS45-212ENST00000611412 SLC10A3P09131 477 aa13.79□□□□□ -0.2
VPS45-212ENST00000611412 SCG2P13521 617 aa13.79□□□□□ -0.2
VPS45-212ENST00000611412 PFKFB3Q16875 520 aaPredicted RBP13.79□□□□□ -0.2
VPS45-212ENST00000611412 WWC2Q6AWC2 1192 aa13.79□□□□□ -0.2
VPS45-212ENST00000611412 FASTKD5Q7L8L6 764 aaKnown RBP13.79□□□□□ -0.2
VPS45-212ENST00000611412 PRPF38AQ8NAV1 312 aaKnown RBP13.79□□□□□ -0.2
VPS45-212ENST00000611412 ZIC5Q96T25 663 aa13.79□□□□□ -0.2
VPS45-212ENST00000611412 CWC22Q9HCG8 908 aaKnown RBP13.79□□□□□ -0.2
VPS45-212ENST00000611412 PPP1R9AQ9ULJ8 1098 aa13.79□□□□□ -0.2
VPS45-212ENST00000611412 KCNJ14Q9UNX9 436 aa13.79□□□□□ -0.2
VPS45-212ENST00000611412 AGTPBP1Q9UPW5 1226 aa13.79□□□□□ -0.2
VPS45-212ENST00000611412 FAM155AB1AL88 458 aaPredicted RBP13.78□□□□□ -0.2
VPS45-212ENST00000611412 ZBTB5O15062 677 aa13.78□□□□□ -0.2
VPS45-212ENST00000611412 CETPP11597 493 aa13.78□□□□□ -0.2
VPS45-212ENST00000611412 SMARCA1P28370 1054 aa13.78□□□□□ -0.2
VPS45-212ENST00000611412 USH1GQ495M9 461 aa13.78□□□□□ -0.2
VPS45-212ENST00000611412 TYW1BQ6NUM6 668 aa13.78□□□□□ -0.2
VPS45-212ENST00000611412 C8orf76Q96K31 380 aa13.78□□□□□ -0.2
VPS45-212ENST00000611412 P2RX7Q99572 595 aaKnown RBP13.78□□□□□ -0.2
VPS45-212ENST00000611412 PNMA6FA0A0J9YX94 578 aa13.78□□□□□ -0.2
VPS45-212ENST00000611412 BTBD19C9JJ37 291 aa13.78□□□□□ -0.2
VPS45-212ENST00000611412 DSG3P32926 999 aa13.78□□□□□ -0.2
VPS45-212ENST00000611412 DDIT3P35638 169 aa13.78□□□□□ -0.2
VPS45-212ENST00000611412 COG2Q14746 738 aa13.78□□□□□ -0.2
VPS45-212ENST00000611412 CPXCR1Q8N123 301 aa13.78□□□□□ -0.2
VPS45-212ENST00000611412 MTMR8Q96EF0 704 aa13.78□□□□□ -0.2
VPS45-212ENST00000611412 PTPN18Q99952 460 aa13.78□□□□□ -0.2
VPS45-212ENST00000611412 ASCC2Q9H1I8 757 aaPredicted RBP13.78□□□□□ -0.2
VPS45-212ENST00000611412 CREBZFQ9NS37 354 aa13.78□□□□□ -0.2
VPS45-212ENST00000611412 H3BQV1 296 aa13.77□□□□□ -0.21
VPS45-212ENST00000611412 PLA2G6O60733 806 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms