RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 CAPNS2Q96L46 248 aa19.69■□□□□ 0.74
SCAMP4-211ENST00000588907 NUP88Q99567 741 aaPredicted RBP19.69■□□□□ 0.74
SCAMP4-211ENST00000588907 GPCPD1Q9NPB8 672 aa19.69■□□□□ 0.74
SCAMP4-211ENST00000588907 FAM217BQ9NTX9 383 aaPredicted RBP19.69■□□□□ 0.74
SCAMP4-211ENST00000588907 HOXC10Q9NYD6 342 aa19.69■□□□□ 0.74
SCAMP4-211ENST00000588907 KIF3AQ9Y496 699 aa19.69■□□□□ 0.74
SCAMP4-211ENST00000588907 HSP90AA1P07900 732 aaKnown RBP19.68■□□□□ 0.74
SCAMP4-211ENST00000588907 GOLGA8HP0CJ92 632 aa19.68■□□□□ 0.74
SCAMP4-211ENST00000588907 CDC27P30260 824 aa19.68■□□□□ 0.74
SCAMP4-211ENST00000588907 ADD1P35611 737 aaKnown RBP19.68■□□□□ 0.74
SCAMP4-211ENST00000588907 MKRN3Q13064 507 aaKnown RBP19.68■□□□□ 0.74
SCAMP4-211ENST00000588907 COG2Q14746 738 aa19.68■□□□□ 0.74
SCAMP4-211ENST00000588907 SYDE2Q5VT97 1194 aa19.68■□□□□ 0.74
SCAMP4-211ENST00000588907 CCDC83Q8IWF9 413 aa19.68■□□□□ 0.74
SCAMP4-211ENST00000588907 STAG2Q8N3U4 1231 aa19.68■□□□□ 0.74
SCAMP4-211ENST00000588907 NECAB1Q8N987 351 aa19.68■□□□□ 0.74
SCAMP4-211ENST00000588907 BRI3BPQ8WY22 251 aa19.68■□□□□ 0.74
SCAMP4-211ENST00000588907 RNF26Q9BY78 433 aaPredicted RBP19.68■□□□□ 0.74
SCAMP4-211ENST00000588907 RIOX1Q9H6W3 641 aa19.68■□□□□ 0.74
SCAMP4-211ENST00000588907 NCOA5Q9HCD5 579 aaKnown RBP19.68■□□□□ 0.74
SCAMP4-211ENST00000588907 DAXXQ9UER7 740 aaPredicted RBP19.68■□□□□ 0.74
SCAMP4-211ENST00000588907 SEC63Q9UGP8 760 aaKnown RBP19.68■□□□□ 0.74
SCAMP4-211ENST00000588907 PPP1R9AQ9ULJ8 1098 aa19.68■□□□□ 0.74
SCAMP4-211ENST00000588907 STK36Q9NRP7 1315 aa19.68■□□□□ 0.74
SCAMP4-211ENST00000588907 MAP2K2P36507 400 aa19.67■□□□□ 0.74
SCAMP4-211ENST00000588907 TREML2Q5T2D2 321 aa19.67■□□□□ 0.74
SCAMP4-211ENST00000588907 CYP4F22Q6NT55 531 aa19.67■□□□□ 0.74
SCAMP4-211ENST00000588907 MB21D1Q8N884 522 aa19.67■□□□□ 0.74
SCAMP4-211ENST00000588907 WASF1Q92558 559 aa19.67■□□□□ 0.74
SCAMP4-211ENST00000588907 RRP36Q96EU6 259 aaKnown RBP19.67■□□□□ 0.74
SCAMP4-211ENST00000588907 PARK7Q99497 189 aaKnown RBP19.67■□□□□ 0.74
SCAMP4-211ENST00000588907 PLEKHA8P1O95397 391 aa19.66■□□□□ 0.74
SCAMP4-211ENST00000588907 ALDH1A1P00352 501 aa19.66■□□□□ 0.74
SCAMP4-211ENST00000588907 TM4SF4P48230 202 aa19.66■□□□□ 0.74
SCAMP4-211ENST00000588907 SSRP1Q08945 709 aaKnown RBP19.66■□□□□ 0.74
SCAMP4-211ENST00000588907 DGKZQ13574 1117 aa19.66■□□□□ 0.74
SCAMP4-211ENST00000588907 NTRK3Q16288 839 aa19.66■□□□□ 0.74
SCAMP4-211ENST00000588907 GPAT2Q6NUI2 795 aa19.66■□□□□ 0.74
SCAMP4-211ENST00000588907 LBX2Q6XYB7 198 aa19.66■□□□□ 0.74
SCAMP4-211ENST00000588907 RASGRP2Q7LDG7 609 aa19.66■□□□□ 0.74
SCAMP4-211ENST00000588907 SRBD1Q8N5C6 995 aaKnown RBP19.66■□□□□ 0.74
SCAMP4-211ENST00000588907 CTDP1Q9Y5B0 961 aaPredicted RBP19.66■□□□□ 0.74
SCAMP4-211ENST00000588907 CNTNAP5Q8WYK1 1306 aa19.66■□□□□ 0.74
SCAMP4-211ENST00000588907 PARP14Q460N5 1801 aa19.65■□□□□ 0.74
SCAMP4-211ENST00000588907 BTBD19C9JJ37 291 aa19.65■□□□□ 0.74
SCAMP4-211ENST00000588907 hCG_1984214I3L0E3 225 aa19.65■□□□□ 0.74
SCAMP4-211ENST00000588907 PDHXO00330 501 aa19.65■□□□□ 0.74
SCAMP4-211ENST00000588907 FMNL1O95466 1100 aaPredicted RBP19.65■□□□□ 0.74
SCAMP4-211ENST00000588907 FUT2Q10981 343 aa19.65■□□□□ 0.74
SCAMP4-211ENST00000588907 ADGRF4Q8IZF3 695 aa19.65■□□□□ 0.74
SCAMP4-211ENST00000588907 FAM177A1Q8N128 213 aaPredicted RBP19.65■□□□□ 0.74
SCAMP4-211ENST00000588907 ZNF713Q8N859 430 aaPredicted RBP19.65■□□□□ 0.74
SCAMP4-211ENST00000588907 NSUN7Q8NE18 718 aaKnown RBP19.65■□□□□ 0.74
SCAMP4-211ENST00000588907 KIFC2Q96AC6 838 aa19.65■□□□□ 0.74
SCAMP4-211ENST00000588907 PRR12Q9ULL5 1215 aa19.65■□□□□ 0.74
SCAMP4-211ENST00000588907 WDR33Q9C0J8 1336 aaKnown RBP19.65■□□□□ 0.74
SCAMP4-211ENST00000588907 PTPDC1A2A3K4 754 aa19.64■□□□□ 0.73
SCAMP4-211ENST00000588907 ZBTB5O15062 677 aa19.64■□□□□ 0.73
SCAMP4-211ENST00000588907 PRPF3O43395 683 aaKnown RBP19.64■□□□□ 0.73
SCAMP4-211ENST00000588907 ZBED4O75132 1171 aa19.64■□□□□ 0.73
SCAMP4-211ENST00000588907 DEXIO95424 95 aa19.64■□□□□ 0.73
SCAMP4-211ENST00000588907 DSG3P32926 999 aa19.64■□□□□ 0.73
SCAMP4-211ENST00000588907 OAZ1P54368 228 aa19.64■□□□□ 0.73
SCAMP4-211ENST00000588907 TTBK2Q6IQ55 1244 aa19.64■□□□□ 0.73
SCAMP4-211ENST00000588907 IFNL1Q8IU54 200 aa19.64■□□□□ 0.73
SCAMP4-211ENST00000588907 SMARCC2Q8TAQ2 1214 aa19.64■□□□□ 0.73
SCAMP4-211ENST00000588907 MTMR8Q96EF0 704 aa19.64■□□□□ 0.73
SCAMP4-211ENST00000588907 UBA5Q9GZZ9 404 aa19.64■□□□□ 0.73
SCAMP4-211ENST00000588907 ASCC2Q9H1I8 757 aaPredicted RBP19.64■□□□□ 0.73
SCAMP4-211ENST00000588907 RANBP17Q9H2T7 1088 aaKnown RBP19.64■□□□□ 0.73
SCAMP4-211ENST00000588907 ADAMTS5Q9UNA0 930 aa19.64■□□□□ 0.73
SCAMP4-211ENST00000588907 SMC3Q9UQE7 1217 aa19.64■□□□□ 0.73
SCAMP4-211ENST00000588907 THSD7BQ9C0I4 1608 aa19.64■□□□□ 0.73
SCAMP4-211ENST00000588907 PNMA6FA0A0J9YX94 578 aa19.63■□□□□ 0.73
SCAMP4-211ENST00000588907 CYTH3O43739 400 aa19.63■□□□□ 0.73
SCAMP4-211ENST00000588907 SLC16A2P36021 539 aa19.63■□□□□ 0.73
SCAMP4-211ENST00000588907 GCLCP48506 637 aaPredicted RBP19.63■□□□□ 0.73
SCAMP4-211ENST00000588907 KIF23Q02241 960 aaPredicted RBP19.63■□□□□ 0.73
SCAMP4-211ENST00000588907 ST3GAL1Q11201 340 aa19.63■□□□□ 0.73
SCAMP4-211ENST00000588907 GRM1Q13255 1194 aa19.63■□□□□ 0.73
SCAMP4-211ENST00000588907 NBPF11Q86T75 865 aa19.63■□□□□ 0.73
SCAMP4-211ENST00000588907 SMCR8Q8TEV9 937 aaPredicted RBP19.63■□□□□ 0.73
SCAMP4-211ENST00000588907 SLC26A6Q9BXS9 759 aa19.63■□□□□ 0.73
SCAMP4-211ENST00000588907 JMJD4Q9H9V9 463 aa19.63■□□□□ 0.73
SCAMP4-211ENST00000588907 SLC38A10Q9HBR0 1119 aa19.63■□□□□ 0.73
SCAMP4-211ENST00000588907 FBXO28Q9NVF7 368 aa19.63■□□□□ 0.73
SCAMP4-211ENST00000588907 SPDYE16A6NNV3 312 aaPredicted RBP19.62■□□□□ 0.73
SCAMP4-211ENST00000588907 VWA5AO00534 786 aa19.62■□□□□ 0.73
SCAMP4-211ENST00000588907 CTDNEP1O95476 244 aa19.62■□□□□ 0.73
SCAMP4-211ENST00000588907 PDIA4P13667 645 aaKnown RBP19.62■□□□□ 0.73
SCAMP4-211ENST00000588907 XBP1P17861 261 aa19.62■□□□□ 0.73
SCAMP4-211ENST00000588907 HERVK_113P62684 666 aa19.62■□□□□ 0.73
SCAMP4-211ENST00000588907 CDC37Q16543 378 aaPredicted RBP19.62■□□□□ 0.73
SCAMP4-211ENST00000588907 CCDC82Q8N4S0 544 aa19.62■□□□□ 0.73
SCAMP4-211ENST00000588907 FAM184AQ8NB25 1140 aa19.62■□□□□ 0.73
SCAMP4-211ENST00000588907 ORC3Q9UBD5 711 aaPredicted RBP19.62■□□□□ 0.73
SCAMP4-211ENST00000588907 MYH6P13533 1939 aa19.62■□□□□ 0.73
SCAMP4-211ENST00000588907 RLFQ13129 1914 aa19.62■□□□□ 0.73
SCAMP4-211ENST00000588907 A0A0G2JMZ2 1700 aa19.62■□□□□ 0.73
SCAMP4-211ENST00000588907 ATP2A1O14983 1001 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms