RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 CCDC85AQ96PX6 553 aaPredicted RBP8.47□□□□□ -1.05
TVP23C-208ENST00000581273 XPO4Q9C0E2 1151 aaKnown RBP8.47□□□□□ -1.05
TVP23C-208ENST00000581273 ECHDC1Q9NTX5 307 aa8.47□□□□□ -1.05
TVP23C-208ENST00000581273 ANKIB1Q9P2G1 1089 aa8.47□□□□□ -1.05
TVP23C-208ENST00000581273 TFIP11Q9UBB9 837 aaKnown RBP8.47□□□□□ -1.05
TVP23C-208ENST00000581273 LCMT1Q9UIC8 334 aa8.47□□□□□ -1.05
TVP23C-208ENST00000581273 PPP2R2CQ9Y2T4 447 aa8.47□□□□□ -1.05
TVP23C-208ENST00000581273 PIEZO1Q92508 2521 aa8.47□□□□□ -1.05
TVP23C-208ENST00000581273 UBE2Q2LH0YL09 131 aa8.46□□□□□ -1.06
TVP23C-208ENST00000581273 IRS4O14654 1257 aaPredicted RBP8.46□□□□□ -1.06
TVP23C-208ENST00000581273 PPP1R12AO14974 1030 aaPredicted RBP8.46□□□□□ -1.06
TVP23C-208ENST00000581273 TBC1D12O60347 775 aa8.46□□□□□ -1.06
TVP23C-208ENST00000581273 SURF6O75683 361 aaKnown RBP8.46□□□□□ -1.06
TVP23C-208ENST00000581273 SASH3O75995 380 aa8.46□□□□□ -1.06
TVP23C-208ENST00000581273 KIAA0754O94854 1291 aa8.46□□□□□ -1.06
TVP23C-208ENST00000581273 SEC31AO94979 1220 aaKnown RBP8.46□□□□□ -1.06
TVP23C-208ENST00000581273 YEATS4O95619 227 aa8.46□□□□□ -1.06
TVP23C-208ENST00000581273 SERPINC1P01008 464 aa8.46□□□□□ -1.06
TVP23C-208ENST00000581273 SLC3A2P08195 630 aaKnown RBP8.46□□□□□ -1.06
TVP23C-208ENST00000581273 CCDC175P0C221 793 aa8.46□□□□□ -1.06
TVP23C-208ENST00000581273 AARSP49588 968 aaKnown RBP eCLIP8.46□□□□□ -1.069e-7■■■■■ 61.1
TVP23C-208ENST00000581273 RPS8P62241 208 aaKnown RBP8.46□□□□□ -1.06
TVP23C-208ENST00000581273 FANCCQ00597 558 aa8.46□□□□□ -1.06
TVP23C-208ENST00000581273 CAP1Q01518 475 aa8.46□□□□□ -1.06
TVP23C-208ENST00000581273 NEDD9Q14511 834 aa8.46□□□□□ -1.06
TVP23C-208ENST00000581273 SF3A1Q15459 793 aaKnown RBP8.46□□□□□ -1.06
TVP23C-208ENST00000581273 NBPF20Q3BBV1 942 aa8.46□□□□□ -1.06
TVP23C-208ENST00000581273 CT47A1Q5JQC4 288 aaPredicted RBP8.46□□□□□ -1.06
TVP23C-208ENST00000581273 BEND6Q5SZJ8 279 aaPredicted RBP8.46□□□□□ -1.06
TVP23C-208ENST00000581273 HDGFL1Q5TGJ6 251 aa8.46□□□□□ -1.06
TVP23C-208ENST00000581273 PRAMEF18Q5VWM3 479 aa8.46□□□□□ -1.06
TVP23C-208ENST00000581273 IQCEQ6IPM2 695 aa8.46□□□□□ -1.06
TVP23C-208ENST00000581273 CWC27Q6UX04 472 aaKnown RBP8.46□□□□□ -1.06
TVP23C-208ENST00000581273 FERMT3Q86UX7 667 aa8.46□□□□□ -1.06
TVP23C-208ENST00000581273 CD99L2Q8TCZ2 262 aa8.46□□□□□ -1.06
TVP23C-208ENST00000581273 MAP4K1Q92918 833 aa8.46□□□□□ -1.06
TVP23C-208ENST00000581273 FBXW7Q969H0 707 aa8.46□□□□□ -1.06
TVP23C-208ENST00000581273 KIAA1468Q9P260 1216 aa8.46□□□□□ -1.06
TVP23C-208ENST00000581273 CDC23Q9UJX2 597 aa8.46□□□□□ -1.06
TVP23C-208ENST00000581273 TPCN1Q9ULQ1 816 aa8.46□□□□□ -1.06
TVP23C-208ENST00000581273 SUFUQ9UMX1 484 aa8.46□□□□□ -1.06
TVP23C-208ENST00000581273 RBM8AQ9Y5S9 174 aaKnown RBP8.46□□□□□ -1.06
TVP23C-208ENST00000581273 RFX7Q2KHR2 1363 aa8.46□□□□□ -1.06
TVP23C-208ENST00000581273 SPEF2Q9C093 1822 aa8.45□□□□□ -1.06
TVP23C-208ENST00000581273 CTAGE15A4D2H0 777 aa8.45□□□□□ -1.06
TVP23C-208ENST00000581273 LARGE1O95461 756 aa8.45□□□□□ -1.06
TVP23C-208ENST00000581273 VIL1P09327 827 aaKnown RBP8.45□□□□□ -1.06
TVP23C-208ENST00000581273 IFIT2P09913 472 aaKnown RBP8.45□□□□□ -1.06
TVP23C-208ENST00000581273 CTAGE8P0CG41 777 aa8.45□□□□□ -1.06
TVP23C-208ENST00000581273 HSP90B1P14625 803 aaKnown RBP8.45□□□□□ -1.06
TVP23C-208ENST00000581273 ME1P48163 572 aa8.45□□□□□ -1.06
TVP23C-208ENST00000581273 TM4SF4P48230 202 aa8.45□□□□□ -1.06
TVP23C-208ENST00000581273 UBASH3AP57075 661 aa8.45□□□□□ -1.06
TVP23C-208ENST00000581273 IRX1P78414 480 aaPredicted RBP8.45□□□□□ -1.06
TVP23C-208ENST00000581273 MYL5Q02045 173 aa8.45□□□□□ -1.06
TVP23C-208ENST00000581273 ARID5BQ14865 1188 aa8.45□□□□□ -1.06
TVP23C-208ENST00000581273 SF3B3Q15393 1217 aaKnown RBP8.45□□□□□ -1.06
TVP23C-208ENST00000581273 MAMSTRQ6ZN01 415 aa8.45□□□□□ -1.06
TVP23C-208ENST00000581273 CTAGE6Q86UF2 777 aa8.45□□□□□ -1.06
TVP23C-208ENST00000581273 VSTM4Q8IW00 320 aa8.45□□□□□ -1.06
TVP23C-208ENST00000581273 CTAGE4Q8IX94 777 aa8.45□□□□□ -1.06
TVP23C-208ENST00000581273 ELOA2Q8IYF1 753 aaPredicted RBP8.45□□□□□ -1.06
TVP23C-208ENST00000581273 CNNM3Q8NE01 707 aa8.45□□□□□ -1.06
TVP23C-208ENST00000581273 ENGASEQ8NFI3 743 aa8.45□□□□□ -1.06
TVP23C-208ENST00000581273 CCDC148Q8NFR7 591 aa8.45□□□□□ -1.06
TVP23C-208ENST00000581273 PLBD2Q8NHP8 589 aa8.45□□□□□ -1.06
TVP23C-208ENST00000581273 TBC1D22AQ8WUA7 517 aa8.45□□□□□ -1.06
TVP23C-208ENST00000581273 SYMPKQ92797 1274 aaKnown RBP8.45□□□□□ -1.06
TVP23C-208ENST00000581273 BRF1Q92994 677 aa8.45□□□□□ -1.06
TVP23C-208ENST00000581273 CCDC51Q96ER9 411 aa8.45□□□□□ -1.06
TVP23C-208ENST00000581273 CABS1Q96KC9 395 aa8.45□□□□□ -1.06
TVP23C-208ENST00000581273 FAM161BQ96MY7 647 aa8.45□□□□□ -1.06
TVP23C-208ENST00000581273 BAG1Q99933 345 aaPredicted RBP8.45□□□□□ -1.06
TVP23C-208ENST00000581273 PDE11AQ9HCR9 933 aa8.45□□□□□ -1.06
TVP23C-208ENST00000581273 SEC31BQ9NQW1 1179 aa8.45□□□□□ -1.06
TVP23C-208ENST00000581273 TOMM22Q9NS69 142 aa8.45□□□□□ -1.06
TVP23C-208ENST00000581273 RTEL1Q9NZ71 1219 aa8.45□□□□□ -1.06
TVP23C-208ENST00000581273 GGA1Q9UJY5 639 aa8.45□□□□□ -1.06
TVP23C-208ENST00000581273 L1RE1Q9UN81 338 aa8.45□□□□□ -1.06
TVP23C-208ENST00000581273 NR2E3Q9Y5X4 410 aa8.45□□□□□ -1.06
TVP23C-208ENST00000581273 CTAGE9A4FU28 777 aa8.44□□□□□ -1.06
TVP23C-208ENST00000581273 SLC27A2O14975 620 aa8.44□□□□□ -1.06
TVP23C-208ENST00000581273 CHUKO15111 745 aa8.44□□□□□ -1.06
TVP23C-208ENST00000581273 EVI5O60447 810 aa8.44□□□□□ -1.06
TVP23C-208ENST00000581273 CUTAO60888 179 aa8.44□□□□□ -1.06
TVP23C-208ENST00000581273 CLSTN1O94985 981 aa8.44□□□□□ -1.06
TVP23C-208ENST00000581273 NBPF7P0C2Y1 421 aaPredicted RBP8.44□□□□□ -1.06
TVP23C-208ENST00000581273 INPP5BP32019 993 aa8.44□□□□□ -1.06
TVP23C-208ENST00000581273 NF2P35240 595 aa8.44□□□□□ -1.06
TVP23C-208ENST00000581273 BCAMP50895 628 aa8.44□□□□□ -1.06
TVP23C-208ENST00000581273 GYS2P54840 703 aa8.44□□□□□ -1.06
TVP23C-208ENST00000581273 CKAP4Q07065 602 aaKnown RBP8.44□□□□□ -1.06
TVP23C-208ENST00000581273 FLIIQ13045 1269 aa8.44□□□□□ -1.06
TVP23C-208ENST00000581273 OS9Q13438 667 aaPredicted RBP8.44□□□□□ -1.06
TVP23C-208ENST00000581273 DRP2Q13474 957 aa8.44□□□□□ -1.06
TVP23C-208ENST00000581273 PRKG1Q13976 671 aa8.44□□□□□ -1.06
TVP23C-208ENST00000581273 MCM6Q14566 821 aa8.44□□□□□ -1.06
TVP23C-208ENST00000581273 PLCB4Q15147 1175 aa8.44□□□□□ -1.06
TVP23C-208ENST00000581273 CFAP100Q494V2 611 aa8.44□□□□□ -1.06
TVP23C-208ENST00000581273 LRCH2Q5VUJ6 765 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms