RNA–Protein interactions for RNA: ENST00000581204.1

SUPT4H1-206, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-206ENST00000581204 SPTY2D1Q68D10 685 aaPredicted RBP10.03□□□□□ -0.8
SUPT4H1-206ENST00000581204 ZNF589Q86UQ0 364 aaPredicted RBP10.03□□□□□ -0.8
SUPT4H1-206ENST00000581204 TRMT44Q8IYL2 757 aaKnown RBP10.03□□□□□ -0.8
SUPT4H1-206ENST00000581204 ZGPATQ8N5A5 531 aaKnown RBP10.03□□□□□ -0.8
SUPT4H1-206ENST00000581204 TDRD7Q8NHU6 1098 aaKnown RBP10.03□□□□□ -0.8
SUPT4H1-206ENST00000581204 WDR66Q8TBY9 1149 aa10.03□□□□□ -0.8
SUPT4H1-206ENST00000581204 RNF166Q96A37 237 aaPredicted RBP10.03□□□□□ -0.8
SUPT4H1-206ENST00000581204 TRIM47Q96LD4 638 aa10.03□□□□□ -0.8
SUPT4H1-206ENST00000581204 IPO9Q96P70 1041 aaKnown RBP10.03□□□□□ -0.8
SUPT4H1-206ENST00000581204 C1QTNF2Q9BXJ5 285 aa10.03□□□□□ -0.8
SUPT4H1-206ENST00000581204 CD209Q9NNX6 404 aa10.03□□□□□ -0.8
SUPT4H1-206ENST00000581204 PDS5AQ29RF7 1337 aaKnown RBP10.03□□□□□ -0.8
SUPT4H1-206ENST00000581204 ZNF532Q9HCE3 1301 aa10.03□□□□□ -0.8
SUPT4H1-206ENST00000581204 IRS2Q9Y4H2 1338 aa10.03□□□□□ -0.8
SUPT4H1-206ENST00000581204 CCL15-CCL14A0A0B4J2E2 113 aa10.02□□□□□ -0.81
SUPT4H1-206ENST00000581204 M0R2C6 588 aa10.02□□□□□ -0.81
SUPT4H1-206ENST00000581204 PPP1R12BO60237 982 aaPredicted RBP10.02□□□□□ -0.81
SUPT4H1-206ENST00000581204 CYP7A1P22680 504 aa10.02□□□□□ -0.81
SUPT4H1-206ENST00000581204 HSPA4P34932 840 aa10.02□□□□□ -0.81
SUPT4H1-206ENST00000581204 WNT7BP56706 349 aa10.02□□□□□ -0.81
SUPT4H1-206ENST00000581204 CCL15Q16663 113 aa10.02□□□□□ -0.81
SUPT4H1-206ENST00000581204 LINC01559Q495D7 138 aa10.02□□□□□ -0.81
SUPT4H1-206ENST00000581204 NBPF12Q5TAG4 269 aaPredicted RBP10.02□□□□□ -0.81
SUPT4H1-206ENST00000581204 ANKRD13AQ8IZ07 590 aa10.02□□□□□ -0.81
SUPT4H1-206ENST00000581204 DIS3LQ8TF46 1054 aaKnown RBP10.02□□□□□ -0.81
SUPT4H1-206ENST00000581204 OSBP2Q969R2 916 aa10.02□□□□□ -0.81
SUPT4H1-206ENST00000581204 COA1Q9GZY4 146 aa10.02□□□□□ -0.81
SUPT4H1-206ENST00000581204 ELP3Q9H9T3 547 aa10.02□□□□□ -0.81
SUPT4H1-206ENST00000581204 DOLKQ9UPQ8 538 aa10.02□□□□□ -0.81
SUPT4H1-206ENST00000581204 JAG2Q9Y219 1238 aa10.02□□□□□ -0.81
SUPT4H1-206ENST00000581204 PCDHAC2Q9Y5I4 1007 aa10.02□□□□□ -0.81
SUPT4H1-206ENST00000581204 PPP2R3BQ9Y5P8 575 aa10.02□□□□□ -0.81
SUPT4H1-206ENST00000581204 RBM8AQ9Y5S9 174 aaKnown RBP10.02□□□□□ -0.81
SUPT4H1-206ENST00000581204 MAST3O60307 1309 aa10.02□□□□□ -0.81
SUPT4H1-206ENST00000581204 MYO3BQ8WXR4 1341 aa10.02□□□□□ -0.81
SUPT4H1-206ENST00000581204 ADGRA2Q96PE1 1338 aa10.02□□□□□ -0.81
SUPT4H1-206ENST00000581204 GPAA1O43292 621 aa10.01□□□□□ -0.81
SUPT4H1-206ENST00000581204 IL1R1P14778 569 aa10.01□□□□□ -0.81
SUPT4H1-206ENST00000581204 ZKSCAN1P17029 563 aaPredicted RBP10.01□□□□□ -0.81
SUPT4H1-206ENST00000581204 IREB2P48200 963 aaKnown RBP10.01□□□□□ -0.81
SUPT4H1-206ENST00000581204 ANAPC15P60006 121 aa10.01□□□□□ -0.81
SUPT4H1-206ENST00000581204 RABEP1Q15276 862 aa10.01□□□□□ -0.81
SUPT4H1-206ENST00000581204 NAA16Q6N069 864 aaPredicted RBP10.01□□□□□ -0.81
SUPT4H1-206ENST00000581204 C17orf99Q6UX52 265 aa10.01□□□□□ -0.81
SUPT4H1-206ENST00000581204 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.01□□□□□ -0.81
SUPT4H1-206ENST00000581204 DZIP1Q86YF9 867 aaKnown RBP10.01□□□□□ -0.81
SUPT4H1-206ENST00000581204 C7orf61Q8IZ16 206 aa10.01□□□□□ -0.81
SUPT4H1-206ENST00000581204 OGFOD1Q8N543 542 aa10.01□□□□□ -0.81
SUPT4H1-206ENST00000581204 MAP4K1Q92918 833 aa10.01□□□□□ -0.81
SUPT4H1-206ENST00000581204 PUS7LQ9H0K6 701 aaKnown RBP10.01□□□□□ -0.81
SUPT4H1-206ENST00000581204 NOD1Q9Y239 953 aa10.01□□□□□ -0.81
SUPT4H1-206ENST00000581204 TCRBV5S4A2TA0A5A2 114 aa10□□□□□ -0.81
SUPT4H1-206ENST00000581204 TNFRSF10AO00220 468 aa10□□□□□ -0.81
SUPT4H1-206ENST00000581204 APPP05067 770 aa10□□□□□ -0.81
SUPT4H1-206ENST00000581204 LDHBP07195 334 aaKnown RBP10□□□□□ -0.81
SUPT4H1-206ENST00000581204 SYN1P17600 705 aa10□□□□□ -0.81
SUPT4H1-206ENST00000581204 RASA1P20936 1047 aa10□□□□□ -0.81
SUPT4H1-206ENST00000581204 VARSP26640 1264 aaKnown RBP10□□□□□ -0.81
SUPT4H1-206ENST00000581204 MMP14P50281 582 aa10□□□□□ -0.81
SUPT4H1-206ENST00000581204 KIF22Q14807 665 aa10□□□□□ -0.81
SUPT4H1-206ENST00000581204 STRIP1Q5VSL9 837 aa10□□□□□ -0.81
SUPT4H1-206ENST00000581204 DEPDC4Q8N2C3 294 aa10□□□□□ -0.81
SUPT4H1-206ENST00000581204 MAFAQ8NHW3 353 aaPredicted RBP10□□□□□ -0.81
SUPT4H1-206ENST00000581204 FOXJ1Q92949 421 aa10□□□□□ -0.81
SUPT4H1-206ENST00000581204 PAWRQ96IZ0 340 aaKnown RBP10□□□□□ -0.81
SUPT4H1-206ENST00000581204 FAM161BQ96MY7 647 aa10□□□□□ -0.81
SUPT4H1-206ENST00000581204 KIF2CQ99661 725 aa10□□□□□ -0.81
SUPT4H1-206ENST00000581204 DSCC1Q9BVC3 393 aa10□□□□□ -0.81
SUPT4H1-206ENST00000581204 NOVA2Q9UNW9 492 aaKnown RBP10□□□□□ -0.81
SUPT4H1-206ENST00000581204 MYPNQ86TC9 1320 aa10□□□□□ -0.81
SUPT4H1-206ENST00000581204 SYNGAP1Q96PV0 1343 aa10□□□□□ -0.81
SUPT4H1-206ENST00000581204 SALL1Q9NSC2 1324 aa10□□□□□ -0.81
SUPT4H1-206ENST00000581204 USP17L15C9J2P7 530 aa9.99□□□□□ -0.81
SUPT4H1-206ENST00000581204 BTBD19C9JJ37 291 aa9.99□□□□□ -0.81
SUPT4H1-206ENST00000581204 USP17L10C9JJH3 530 aa9.99□□□□□ -0.81
SUPT4H1-206ENST00000581204 USP17L13C9JLJ4 530 aa9.99□□□□□ -0.81
SUPT4H1-206ENST00000581204 USP17L12C9JPN9 530 aa9.99□□□□□ -0.81
SUPT4H1-206ENST00000581204 USP17L11C9JVI0 530 aa9.99□□□□□ -0.81
SUPT4H1-206ENST00000581204 USP17L21D6R901 530 aa9.99□□□□□ -0.81
SUPT4H1-206ENST00000581204 USP17L18D6R9N7 530 aa9.99□□□□□ -0.81
SUPT4H1-206ENST00000581204 USP17L22D6RA61 530 aa9.99□□□□□ -0.81
SUPT4H1-206ENST00000581204 USP17L17D6RBQ6 530 aa9.99□□□□□ -0.81
SUPT4H1-206ENST00000581204 USP17L19D6RCP7 530 aa9.99□□□□□ -0.81
SUPT4H1-206ENST00000581204 USP17L20D6RJB6 530 aa9.99□□□□□ -0.81
SUPT4H1-206ENST00000581204 MBD4O95243 580 aa9.99□□□□□ -0.81
SUPT4H1-206ENST00000581204 HSPD1P10809 573 aaKnown RBP9.99□□□□□ -0.81
SUPT4H1-206ENST00000581204 PSMC4P43686 418 aa9.99□□□□□ -0.81
SUPT4H1-206ENST00000581204 RPIAP49247 311 aa9.99□□□□□ -0.81
SUPT4H1-206ENST00000581204 GTF2A2P52657 109 aa9.99□□□□□ -0.81
SUPT4H1-206ENST00000581204 SH3BP2P78314 561 aa9.99□□□□□ -0.81
SUPT4H1-206ENST00000581204 GTF2IP78347 998 aa9.99□□□□□ -0.81
SUPT4H1-206ENST00000581204 GSTO1P78417 241 aa9.99□□□□□ -0.81
SUPT4H1-206ENST00000581204 MECOMQ03112 1051 aa9.99□□□□□ -0.81
SUPT4H1-206ENST00000581204 PRKCZQ05513 592 aa9.99□□□□□ -0.81
SUPT4H1-206ENST00000581204 USP17L24Q0WX57 530 aa9.99□□□□□ -0.81
SUPT4H1-206ENST00000581204 TRIM32Q13049 653 aa9.99□□□□□ -0.81
SUPT4H1-206ENST00000581204 NECTIN1Q15223 517 aa9.99□□□□□ -0.81
SUPT4H1-206ENST00000581204 VPS53Q5VIR6 699 aa9.99□□□□□ -0.81
SUPT4H1-206ENST00000581204 CREB3L3Q68CJ9 461 aa9.99□□□□□ -0.81
SUPT4H1-206ENST00000581204 TMED8Q6PL24 325 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 281.7 ms