RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 USP17L20D6RJB6 530 aa12.13□□□□□ -0.47
CCDC47-203ENST00000580986 PARP1P09874 1014 aaKnown RBP12.13□□□□□ -0.47
CCDC47-203ENST00000580986 USP17L24Q0WX57 530 aa12.13□□□□□ -0.47
CCDC47-203ENST00000580986 CCL15Q16663 113 aa12.13□□□□□ -0.47
CCDC47-203ENST00000580986 KIAA1755Q5JYT7 1200 aa12.13□□□□□ -0.47
CCDC47-203ENST00000580986 GPAT2Q6NUI2 795 aa12.13□□□□□ -0.47
CCDC47-203ENST00000580986 FAM160B2Q86V87 743 aa12.13□□□□□ -0.47
CCDC47-203ENST00000580986 FANCBQ8NB91 859 aa12.13□□□□□ -0.47
CCDC47-203ENST00000580986 CTCFLQ8NI51 663 aaPredicted RBP12.13□□□□□ -0.47
CCDC47-203ENST00000580986 GTF3C2Q8WUA4 911 aaPredicted RBP12.13□□□□□ -0.47
CCDC47-203ENST00000580986 BRI3BPQ8WY22 251 aa12.13□□□□□ -0.47
CCDC47-203ENST00000580986 ZSCAN31Q96LW9 406 aaPredicted RBP12.13□□□□□ -0.47
CCDC47-203ENST00000580986 LZTS2Q9BRK4 669 aa12.13□□□□□ -0.47
CCDC47-203ENST00000580986 SH2B1Q9NRF2 756 aaPredicted RBP12.13□□□□□ -0.47
CCDC47-203ENST00000580986 PNMA3Q9UL41 463 aa12.13□□□□□ -0.47
CCDC47-203ENST00000580986 BRPF3Q9ULD4 1205 aa12.13□□□□□ -0.47
CCDC47-203ENST00000580986 LIMCH1Q9UPQ0 1083 aa12.13□□□□□ -0.47
CCDC47-203ENST00000580986 GOLGA8BA8MQT2 603 aa12.12□□□□□ -0.47
CCDC47-203ENST00000580986 ALDH1A1P00352 501 aa12.12□□□□□ -0.47
CCDC47-203ENST00000580986 PDIA3P30101 505 aaKnown RBP12.12□□□□□ -0.47
CCDC47-203ENST00000580986 METAP2P50579 478 aaKnown RBP eCLIP12.12□□□□□ -0.47
CCDC47-203ENST00000580986 STAT2P52630 851 aa12.12□□□□□ -0.47
CCDC47-203ENST00000580986 APOBRQ0VD83 1088 aa12.12□□□□□ -0.47
CCDC47-203ENST00000580986 OTUD7BQ6GQQ9 843 aa12.12□□□□□ -0.47
CCDC47-203ENST00000580986 CATSPERGQ6ZRH7 1159 aa12.12□□□□□ -0.47
CCDC47-203ENST00000580986 CHURC1Q8WUH1 139 aa12.12□□□□□ -0.47
CCDC47-203ENST00000580986 SPZ1Q9BXG8 430 aa12.12□□□□□ -0.47
CCDC47-203ENST00000580986 TMEM121BQ9BXQ6 578 aaPredicted RBP12.12□□□□□ -0.47
CCDC47-203ENST00000580986 CFHR5Q9BXR6 569 aa12.12□□□□□ -0.47
CCDC47-203ENST00000580986 RPAP3Q9H6T3 665 aaPredicted RBP12.12□□□□□ -0.47
CCDC47-203ENST00000580986 MAD2L2Q9UI95 211 aa12.12□□□□□ -0.47
CCDC47-203ENST00000580986 FEM1BQ9UK73 627 aa12.12□□□□□ -0.47
CCDC47-203ENST00000580986 TPCN1Q9ULQ1 816 aa12.12□□□□□ -0.47
CCDC47-203ENST00000580986 HPS5Q9UPZ3 1129 aa12.12□□□□□ -0.47
CCDC47-203ENST00000580986 BTBD19C9JJ37 291 aa12.11□□□□□ -0.47
CCDC47-203ENST00000580986 DHX16O60231 1041 aaKnown RBP12.11□□□□□ -0.47
CCDC47-203ENST00000580986 PFKFB2O60825 505 aa12.11□□□□□ -0.47
CCDC47-203ENST00000580986 CHRM1P11229 460 aaPredicted RBP12.11□□□□□ -0.47
CCDC47-203ENST00000580986 VEGFBP49765 207 aa12.11□□□□□ -0.47
CCDC47-203ENST00000580986 ZYXQ15942 572 aaKnown RBP12.11□□□□□ -0.47
CCDC47-203ENST00000580986 RTN1Q16799 776 aa12.11□□□□□ -0.47
CCDC47-203ENST00000580986 FAM83BQ5T0W9 1011 aa12.11□□□□□ -0.47
CCDC47-203ENST00000580986 GADL1Q6ZQY3 521 aa12.11□□□□□ -0.47
CCDC47-203ENST00000580986 MICU3Q86XE3 530 aa12.11□□□□□ -0.47
CCDC47-203ENST00000580986 SPICE1Q8N0Z3 855 aa12.11□□□□□ -0.47
CCDC47-203ENST00000580986 MB21D1Q8N884 522 aa12.11□□□□□ -0.47
CCDC47-203ENST00000580986 PRPF38AQ8NAV1 312 aaKnown RBP12.11□□□□□ -0.47
CCDC47-203ENST00000580986 HOXC10Q9NYD6 342 aa12.11□□□□□ -0.47
CCDC47-203ENST00000580986 PNMA2Q9UL42 364 aa12.11□□□□□ -0.47
CCDC47-203ENST00000580986 ADAMTS5Q9UNA0 930 aa12.11□□□□□ -0.47
CCDC47-203ENST00000580986 GOLGA8AA7E2F4 631 aa12.1□□□□□ -0.47
CCDC47-203ENST00000580986 OSBPP22059 807 aa12.1□□□□□ -0.47
CCDC47-203ENST00000580986 KIF23Q02241 960 aaPredicted RBP12.1□□□□□ -0.47
CCDC47-203ENST00000580986 COG2Q14746 738 aa12.1□□□□□ -0.47
CCDC47-203ENST00000580986 CCDC96Q2M329 555 aa12.1□□□□□ -0.47
CCDC47-203ENST00000580986 TREML2Q5T2D2 321 aa12.1□□□□□ -0.47
CCDC47-203ENST00000580986 PAXIP1Q6ZW49 1069 aaPredicted RBP12.1□□□□□ -0.47
CCDC47-203ENST00000580986 TMTC3Q6ZXV5 915 aa12.1□□□□□ -0.47
CCDC47-203ENST00000580986 PDCD7Q8N8D1 485 aaKnown RBP12.1□□□□□ -0.47
CCDC47-203ENST00000580986 NUP133Q8WUM0 1156 aa12.1□□□□□ -0.47
CCDC47-203ENST00000580986 GTF3C6Q969F1 213 aa12.1□□□□□ -0.47
CCDC47-203ENST00000580986 MTMR8Q96EF0 704 aa12.1□□□□□ -0.47
CCDC47-203ENST00000580986 PARK7Q99497 189 aaKnown RBP12.1□□□□□ -0.47
CCDC47-203ENST00000580986 PTPN18Q99952 460 aa12.1□□□□□ -0.47
CCDC47-203ENST00000580986 SLF1Q9BQI6 1058 aa12.1□□□□□ -0.47
CCDC47-203ENST00000580986 SLKQ9H2G2 1235 aaPredicted RBP12.1□□□□□ -0.47
CCDC47-203ENST00000580986 RIOX1Q9H6W3 641 aa12.1□□□□□ -0.47
CCDC47-203ENST00000580986 FAM217BQ9NTX9 383 aaPredicted RBP12.1□□□□□ -0.47
CCDC47-203ENST00000580986 RBM27Q9P2N5 1060 aaKnown RBP12.1□□□□□ -0.47
CCDC47-203ENST00000580986 PPP1R9AQ9ULJ8 1098 aa12.1□□□□□ -0.47
CCDC47-203ENST00000580986 TMEM232C9JQI7 657 aa12.09□□□□□ -0.47
CCDC47-203ENST00000580986 KLRF2D3W0D1 207 aa12.09□□□□□ -0.47
CCDC47-203ENST00000580986 PDHXO00330 501 aa12.09□□□□□ -0.47
CCDC47-203ENST00000580986 IGF2BP3O00425 579 aaKnown RBP eCLIP12.09□□□□□ -0.47
CCDC47-203ENST00000580986 ATP2A1O14983 1001 aa12.09□□□□□ -0.47
CCDC47-203ENST00000580986 FLOT1O75955 427 aa12.09□□□□□ -0.47
CCDC47-203ENST00000580986 IFNAR1P17181 557 aa12.09□□□□□ -0.47
CCDC47-203ENST00000580986 GCLCP48506 637 aaPredicted RBP12.09□□□□□ -0.47
CCDC47-203ENST00000580986 OAZ1P54368 228 aa12.09□□□□□ -0.47
CCDC47-203ENST00000580986 IRX3P78415 501 aaPredicted RBP12.09□□□□□ -0.47
CCDC47-203ENST00000580986 FUT2Q10981 343 aa12.09□□□□□ -0.47
CCDC47-203ENST00000580986 DGKZQ13574 1117 aa12.09□□□□□ -0.47
CCDC47-203ENST00000580986 NTRK3Q16288 839 aa12.09□□□□□ -0.47
CCDC47-203ENST00000580986 ME3Q16798 604 aa12.09□□□□□ -0.47
CCDC47-203ENST00000580986 CPLX2Q6PUV4 134 aaKnown RBP12.09□□□□□ -0.47
CCDC47-203ENST00000580986 KCTD1Q719H9 257 aa12.09□□□□□ -0.47
CCDC47-203ENST00000580986 FAM43AQ8N2R8 423 aa12.09□□□□□ -0.47
CCDC47-203ENST00000580986 STAG2Q8N3U4 1231 aa12.09□□□□□ -0.47
CCDC47-203ENST00000580986 MYL10Q9BUA6 226 aa12.09□□□□□ -0.47
CCDC47-203ENST00000580986 TANGO6Q9C0B7 1094 aa12.09□□□□□ -0.47
CCDC47-203ENST00000580986 ASCC2Q9H1I8 757 aaPredicted RBP12.09□□□□□ -0.47
CCDC47-203ENST00000580986 ADGRA2Q96PE1 1338 aa12.09□□□□□ -0.47
CCDC47-203ENST00000580986 SPDYE16A6NNV3 312 aaPredicted RBP12.08□□□□□ -0.48
CCDC47-203ENST00000580986 RAD21O60216 631 aa12.08□□□□□ -0.48
CCDC47-203ENST00000580986 CDKL5O76039 1030 aa12.08□□□□□ -0.48
CCDC47-203ENST00000580986 CD2BP2O95400 341 aaKnown RBP12.08□□□□□ -0.48
CCDC47-203ENST00000580986 PSEN1P49768 467 aa12.08□□□□□ -0.48
CCDC47-203ENST00000580986 HERVK_113P62684 666 aa12.08□□□□□ -0.48
CCDC47-203ENST00000580986 SCRN1Q12765 414 aa12.08□□□□□ -0.48
CCDC47-203ENST00000580986 TRAF1Q13077 416 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms