RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 SSH1Q8WYL5 1049 aa7.16□□□□□ -1.26
SMG6-219ENST00000575663 DDX11Q96FC9 970 aa7.16□□□□□ -1.26
SMG6-219ENST00000575663 SLC9A7Q96T83 725 aa7.16□□□□□ -1.26
SMG6-219ENST00000575663 VCPKMTQ9H867 229 aa7.16□□□□□ -1.26
SMG6-219ENST00000575663 CERS4Q9HA82 394 aa7.16□□□□□ -1.26
SMG6-219ENST00000575663 MRS2Q9HD23 443 aa7.16□□□□□ -1.26
SMG6-219ENST00000575663 SNRKQ9NRH2 765 aa7.16□□□□□ -1.26
SMG6-219ENST00000575663 SMC4Q9NTJ3 1288 aa7.16□□□□□ -1.26
SMG6-219ENST00000575663 PLXNA1Q9UIW2 1896 aa7.15□□□□□ -1.26
SMG6-219ENST00000575663 CHD9Q3L8U1 2897 aa7.15□□□□□ -1.26
SMG6-219ENST00000575663 PIEZO1Q92508 2521 aa7.15□□□□□ -1.26
SMG6-219ENST00000575663 ZEB2O60315 1214 aa7.15□□□□□ -1.26
SMG6-219ENST00000575663 IDH1O75874 414 aaKnown RBP7.15□□□□□ -1.26
SMG6-219ENST00000575663 CYP2E1P05181 493 aaPredicted RBP7.15□□□□□ -1.26
SMG6-219ENST00000575663 GNAI3P08754 354 aa7.15□□□□□ -1.26
SMG6-219ENST00000575663 STAT3P40763 770 aa7.15□□□□□ -1.26
SMG6-219ENST00000575663 G3BP1Q13283 466 aaKnown RBP eCLIP7.15□□□□□ -1.26
SMG6-219ENST00000575663 MTX1Q13505 466 aa7.15□□□□□ -1.26
SMG6-219ENST00000575663 ACVR2BQ13705 512 aa7.15□□□□□ -1.26
SMG6-219ENST00000575663 MAMDC4Q6UXC1 1216 aa7.15□□□□□ -1.26
SMG6-219ENST00000575663 ZNF467Q7Z7K2 595 aaPredicted RBP7.15□□□□□ -1.26
SMG6-219ENST00000575663 MEIS3Q99687 375 aa7.15□□□□□ -1.26
SMG6-219ENST00000575663 TEX13BQ9BXU2 312 aa7.15□□□□□ -1.26
SMG6-219ENST00000575663 API5Q9BZZ5 524 aaKnown RBP7.15□□□□□ -1.26
SMG6-219ENST00000575663 UPF3AQ9H1J1 476 aaKnown RBP7.15□□□□□ -1.26
SMG6-219ENST00000575663 ABHD16BQ9H3Z7 469 aa7.15□□□□□ -1.26
SMG6-219ENST00000575663 SWAP70Q9UH65 585 aa7.15□□□□□ -1.26
SMG6-219ENST00000575663 ZNF536O15090 1300 aa7.15□□□□□ -1.26
SMG6-219ENST00000575663 UMODL1Q5DID0 1318 aa7.15□□□□□ -1.26
SMG6-219ENST00000575663 BDP1A6H8Y1 2624 aa7.14□□□□□ -1.27
SMG6-219ENST00000575663 CHD7Q9P2D1 2997 aa7.14□□□□□ -1.27
SMG6-219ENST00000575663 RFXAPO00287 272 aa7.14□□□□□ -1.27
SMG6-219ENST00000575663 VWA5AO00534 786 aa7.14□□□□□ -1.27
SMG6-219ENST00000575663 DCXO43602 365 aa7.14□□□□□ -1.27
SMG6-219ENST00000575663 B4GALT4O60513 344 aa7.14□□□□□ -1.27
SMG6-219ENST00000575663 SNAI1O95863 264 aaPredicted RBP7.14□□□□□ -1.27
SMG6-219ENST00000575663 ZAP70P43403 619 aa7.14□□□□□ -1.27
SMG6-219ENST00000575663 PLCD1P51178 756 aa7.14□□□□□ -1.27
SMG6-219ENST00000575663 FOXK2Q01167 660 aa7.14□□□□□ -1.27
SMG6-219ENST00000575663 GABPAQ06546 454 aa7.14□□□□□ -1.27
SMG6-219ENST00000575663 GRB10Q13322 594 aa7.14□□□□□ -1.27
SMG6-219ENST00000575663 ITGA7Q13683 1181 aa7.14□□□□□ -1.27
SMG6-219ENST00000575663 CCDC184Q52MB2 194 aa7.14□□□□□ -1.27
SMG6-219ENST00000575663 FOCADQ5VW36 1801 aa7.14□□□□□ -1.27
SMG6-219ENST00000575663 KRT40Q6A162 431 aa7.14□□□□□ -1.27
SMG6-219ENST00000575663 FAM178BQ8IXR5 827 aa7.14□□□□□ -1.27
SMG6-219ENST00000575663 MAGEB6Q8N7X4 407 aa7.14□□□□□ -1.27
SMG6-219ENST00000575663 SLC43A3Q8NBI5 491 aa7.14□□□□□ -1.27
SMG6-219ENST00000575663 PHOSPHO2Q8TCD6 241 aa7.14□□□□□ -1.27
SMG6-219ENST00000575663 ZNF512BQ96KM6 892 aaPredicted RBP7.14□□□□□ -1.27
SMG6-219ENST00000575663 FBXL18Q96ME1 805 aa7.14□□□□□ -1.27
SMG6-219ENST00000575663 NOC4LQ9BVI4 516 aaKnown RBP7.14□□□□□ -1.27
SMG6-219ENST00000575663 WNT8AQ9H1J5 351 aa7.14□□□□□ -1.27
SMG6-219ENST00000575663 UBE2ZQ9H832 354 aaPredicted RBP7.14□□□□□ -1.27
SMG6-219ENST00000575663 GOPCQ9HD26 462 aa7.14□□□□□ -1.27
SMG6-219ENST00000575663 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.14□□□□□ -1.27
SMG6-219ENST00000575663 LMCD1Q9NZU5 365 aa7.14□□□□□ -1.27
SMG6-219ENST00000575663 ZNF214Q9UL59 606 aaPredicted RBP7.14□□□□□ -1.27
SMG6-219ENST00000575663 PPP1R9AQ9ULJ8 1098 aa7.14□□□□□ -1.27
SMG6-219ENST00000575663 TMX2Q9Y320 296 aa7.14□□□□□ -1.27
SMG6-219ENST00000575663 CTDP1Q9Y5B0 961 aaPredicted RBP7.14□□□□□ -1.27
SMG6-219ENST00000575663 EPOPA6NHQ4 379 aa7.13□□□□□ -1.27
SMG6-219ENST00000575663 E9PSI1 815 aa7.13□□□□□ -1.27
SMG6-219ENST00000575663 RAD21O60216 631 aa7.13□□□□□ -1.27
SMG6-219ENST00000575663 ST18O60284 1047 aa7.13□□□□□ -1.27
SMG6-219ENST00000575663 SUPT20HL2P0C7V6 817 aa7.13□□□□□ -1.27
SMG6-219ENST00000575663 RFC2P35250 354 aa7.13□□□□□ -1.27
SMG6-219ENST00000575663 NKX3-2P78367 333 aa7.13□□□□□ -1.27
SMG6-219ENST00000575663 IRX5P78411 483 aaPredicted RBP7.13□□□□□ -1.27
SMG6-219ENST00000575663 TAP1Q03518 808 aa7.13□□□□□ -1.27
SMG6-219ENST00000575663 OS9Q13438 667 aaPredicted RBP7.13□□□□□ -1.27
SMG6-219ENST00000575663 PUS10Q3MIT2 529 aaKnown RBP7.13□□□□□ -1.27
SMG6-219ENST00000575663 CCDC144BQ3MJ40 725 aa7.13□□□□□ -1.27
SMG6-219ENST00000575663 TNNI3KQ59H18 835 aa7.13□□□□□ -1.27
SMG6-219ENST00000575663 KIAA1755Q5JYT7 1200 aa7.13□□□□□ -1.27
SMG6-219ENST00000575663 SNRNP48Q6IEG0 339 aaKnown RBP7.13□□□□□ -1.27
SMG6-219ENST00000575663 CXCL17Q6UXB2 119 aa7.13□□□□□ -1.27
SMG6-219ENST00000575663 NOL8Q76FK4 1167 aaKnown RBP7.13□□□□□ -1.27
SMG6-219ENST00000575663 TLK2Q86UE8 772 aa7.13□□□□□ -1.27
SMG6-219ENST00000575663 SCLYQ96I15 445 aa7.13□□□□□ -1.27
SMG6-219ENST00000575663 CRNKL1Q9BZJ0 848 aaKnown RBP7.13□□□□□ -1.27
SMG6-219ENST00000575663 CD320Q9NPF0 282 aa7.13□□□□□ -1.27
SMG6-219ENST00000575663 GPR108Q9NPR9 543 aa7.13□□□□□ -1.27
SMG6-219ENST00000575663 PIH1D3Q9NQM4 214 aaKnown RBP7.13□□□□□ -1.27
SMG6-219ENST00000575663 MCM9Q9NXL9 1143 aa7.13□□□□□ -1.27
SMG6-219ENST00000575663 ADAMTS5Q9UNA0 930 aa7.13□□□□□ -1.27
SMG6-219ENST00000575663 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.13□□□□□ -1.27
SMG6-219ENST00000575663 FPGT-TNNI3KV9GXZ4 949 aa7.13□□□□□ -1.27
SMG6-219ENST00000575663 TCF20Q9UGU0 1960 aaKnown RBP7.12□□□□□ -1.27
SMG6-219ENST00000575663 DNAJC25-GNG10A0A024R161 153 aa7.12□□□□□ -1.27
SMG6-219ENST00000575663 ADCY6O43306 1168 aa7.12□□□□□ -1.27
SMG6-219ENST00000575663 BAIAP3O94812 1187 aa7.12□□□□□ -1.27
SMG6-219ENST00000575663 KCNA5P22460 613 aa7.12□□□□□ -1.27
SMG6-219ENST00000575663 KCNJ6P48051 423 aa7.12□□□□□ -1.27
SMG6-219ENST00000575663 BEX3Q00994 111 aa7.12□□□□□ -1.27
SMG6-219ENST00000575663 TNFAIP2Q03169 654 aa7.12□□□□□ -1.27
SMG6-219ENST00000575663 TTLL4Q14679 1199 aa7.12□□□□□ -1.27
SMG6-219ENST00000575663 FSCN1Q16658 493 aaKnown RBP7.12□□□□□ -1.27
SMG6-219ENST00000575663 LEXMQ3ZCV2 418 aa7.12□□□□□ -1.27
SMG6-219ENST00000575663 ARMCX2Q7L311 632 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 164.6 ms