RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 FTSJ3Q8IY81 847 aaKnown RBP12.03□□□□□ -0.48
CALCOCO2-227ENST00000575560 RHPN1Q8TCX5 695 aa12.03□□□□□ -0.48
CALCOCO2-227ENST00000575560 TIFAQ96CG3 184 aa12.03□□□□□ -0.48
CALCOCO2-227ENST00000575560 FAM184BQ9ULE4 1060 aa12.03□□□□□ -0.48
CALCOCO2-227ENST00000575560 CNPY2Q9Y2B0 182 aa12.03□□□□□ -0.48
CALCOCO2-227ENST00000575560 NAV1Q8NEY1 1877 aa12.03□□□□□ -0.48
CALCOCO2-227ENST00000575560 ELP1O95163 1332 aa12.03□□□□□ -0.48
CALCOCO2-227ENST00000575560 SYNGAP1Q96PV0 1343 aa12.03□□□□□ -0.48
CALCOCO2-227ENST00000575560 PARP14Q460N5 1801 aa12.02□□□□□ -0.48
CALCOCO2-227ENST00000575560 DNAJC25-GNG10A0A024R161 153 aa12.02□□□□□ -0.49
CALCOCO2-227ENST00000575560 USP17L12C9JPN9 530 aa12.02□□□□□ -0.49
CALCOCO2-227ENST00000575560 USP17L21D6R901 530 aa12.02□□□□□ -0.49
CALCOCO2-227ENST00000575560 CCER2I3L3R5 266 aa12.02□□□□□ -0.49
CALCOCO2-227ENST00000575560 DUSP11O75319 330 aaKnown RBP12.02□□□□□ -0.49
CALCOCO2-227ENST00000575560 ADD2P35612 726 aa12.02□□□□□ -0.49
CALCOCO2-227ENST00000575560 TMEM240Q5SV17 173 aa12.02□□□□□ -0.49
CALCOCO2-227ENST00000575560 ATXN2LQ8WWM7 1075 aaKnown RBP12.02□□□□□ -0.49
CALCOCO2-227ENST00000575560 DNAJC2Q99543 621 aaKnown RBP12.02□□□□□ -0.49
CALCOCO2-227ENST00000575560 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.02□□□□□ -0.49
CALCOCO2-227ENST00000575560 PBX4Q9BYU1 374 aa12.02□□□□□ -0.49
CALCOCO2-227ENST00000575560 GOPCQ9HD26 462 aa12.02□□□□□ -0.49
CALCOCO2-227ENST00000575560 MYADML2A6NDP7 307 aa12.01□□□□□ -0.49
CALCOCO2-227ENST00000575560 GRXCR1A8MXD5 290 aa12.01□□□□□ -0.49
CALCOCO2-227ENST00000575560 MBD4O95243 580 aa12.01□□□□□ -0.49
CALCOCO2-227ENST00000575560 COL9A1P20849 921 aa12.01□□□□□ -0.49
CALCOCO2-227ENST00000575560 CST5P28325 142 aaPredicted RBP12.01□□□□□ -0.49
CALCOCO2-227ENST00000575560 PBX2P40425 430 aa12.01□□□□□ -0.49
CALCOCO2-227ENST00000575560 IRX5P78411 483 aaPredicted RBP12.01□□□□□ -0.49
CALCOCO2-227ENST00000575560 FAM83BQ5T0W9 1011 aa12.01□□□□□ -0.49
CALCOCO2-227ENST00000575560 AKNAD1Q5T1N1 836 aa12.01□□□□□ -0.49
CALCOCO2-227ENST00000575560 ZNF467Q7Z7K2 595 aaPredicted RBP12.01□□□□□ -0.49
CALCOCO2-227ENST00000575560 CLASRPQ8N2M8 674 aaKnown RBP12.01□□□□□ -0.49
CALCOCO2-227ENST00000575560 TEX13BQ9BXU2 312 aa12.01□□□□□ -0.49
CALCOCO2-227ENST00000575560 RIPK3Q9Y572 518 aa12.01□□□□□ -0.49
CALCOCO2-227ENST00000575560 COL11A1P12107 1806 aaPredicted RBP12□□□□□ -0.49
CALCOCO2-227ENST00000575560 BDP1A6H8Y1 2624 aa12□□□□□ -0.49
CALCOCO2-227ENST00000575560 ATP2A1O14983 1001 aa12□□□□□ -0.49
CALCOCO2-227ENST00000575560 ADCY6O43306 1168 aa12□□□□□ -0.49
CALCOCO2-227ENST00000575560 ASGR1P07306 291 aa12□□□□□ -0.49
CALCOCO2-227ENST00000575560 PPIGQ13427 754 aaKnown RBP eCLIP12□□□□□ -0.49
CALCOCO2-227ENST00000575560 ACVR2BQ13705 512 aa12□□□□□ -0.49
CALCOCO2-227ENST00000575560 CTR9Q6PD62 1173 aa12□□□□□ -0.49
CALCOCO2-227ENST00000575560 CCDC174Q6PII3 467 aa12□□□□□ -0.49
CALCOCO2-227ENST00000575560 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12□□□□□ -0.49
CALCOCO2-227ENST00000575560 KIF1BPQ96EK5 621 aa12□□□□□ -0.49
CALCOCO2-227ENST00000575560 GLT1D1Q96MS3 346 aa12□□□□□ -0.49
CALCOCO2-227ENST00000575560 ASB2Q96Q27 587 aa12□□□□□ -0.49
CALCOCO2-227ENST00000575560 UPF3AQ9H1J1 476 aaKnown RBP12□□□□□ -0.49
CALCOCO2-227ENST00000575560 PAG1Q9NWQ8 432 aa12□□□□□ -0.49
CALCOCO2-227ENST00000575560 MROH7Q68CQ1 1323 aa12□□□□□ -0.49
CALCOCO2-227ENST00000575560 ZBED9Q6R2W3 1325 aa12□□□□□ -0.49
CALCOCO2-227ENST00000575560 PLXNA1Q9UIW2 1896 aa12□□□□□ -0.49
CALCOCO2-227ENST00000575560 ARVCFO00192 962 aa11.99□□□□□ -0.49
CALCOCO2-227ENST00000575560 CHGBP05060 677 aa11.99□□□□□ -0.49
CALCOCO2-227ENST00000575560 IFIT2P09913 472 aaKnown RBP11.99□□□□□ -0.49
CALCOCO2-227ENST00000575560 C6orf222P0C671 652 aaPredicted RBP11.99□□□□□ -0.49
CALCOCO2-227ENST00000575560 CSF2RAP15509 400 aa11.99□□□□□ -0.49
CALCOCO2-227ENST00000575560 GJA9P57773 515 aa11.99□□□□□ -0.49
CALCOCO2-227ENST00000575560 NKX3-2P78367 333 aa11.99□□□□□ -0.49
CALCOCO2-227ENST00000575560 ADGRE1Q14246 886 aa11.99□□□□□ -0.49
CALCOCO2-227ENST00000575560 CCDC144BQ3MJ40 725 aa11.99□□□□□ -0.49
CALCOCO2-227ENST00000575560 SNRNP48Q6IEG0 339 aaKnown RBP11.99□□□□□ -0.49
CALCOCO2-227ENST00000575560 ZNF365Q70YC5 407 aa11.99□□□□□ -0.49
CALCOCO2-227ENST00000575560 AMOTL1Q8IY63 956 aa11.99□□□□□ -0.49
CALCOCO2-227ENST00000575560 TMEM199Q8N511 208 aa11.99□□□□□ -0.49
CALCOCO2-227ENST00000575560 PRPF38AQ8NAV1 312 aaKnown RBP11.99□□□□□ -0.49
CALCOCO2-227ENST00000575560 PCSK9Q8NBP7 692 aaKnown RBP11.99□□□□□ -0.49
CALCOCO2-227ENST00000575560 DDX11Q96FC9 970 aa11.99□□□□□ -0.49
CALCOCO2-227ENST00000575560 GAS2L1Q99501 681 aaPredicted RBP11.99□□□□□ -0.49
CALCOCO2-227ENST00000575560 NUP88Q99567 741 aaPredicted RBP11.99□□□□□ -0.49
CALCOCO2-227ENST00000575560 SLF1Q9BQI6 1058 aa11.99□□□□□ -0.49
CALCOCO2-227ENST00000575560 PRDM12Q9H4Q4 367 aa11.99□□□□□ -0.49
CALCOCO2-227ENST00000575560 ZHX1Q9UKY1 873 aaPredicted RBP11.99□□□□□ -0.49
CALCOCO2-227ENST00000575560 A0A0U1RQG5 324 aaPredicted RBP11.98□□□□□ -0.49
CALCOCO2-227ENST00000575560 F5H6K3 240 aa11.98□□□□□ -0.49
CALCOCO2-227ENST00000575560 CTAGE5O15320 804 aa11.98□□□□□ -0.49
CALCOCO2-227ENST00000575560 CD4P01730 458 aa11.98□□□□□ -0.49
CALCOCO2-227ENST00000575560 ATP5JP18859 108 aa11.98□□□□□ -0.49
CALCOCO2-227ENST00000575560 KLRC3Q07444 240 aa11.98□□□□□ -0.49
CALCOCO2-227ENST00000575560 UBE3CQ15386 1083 aa11.98□□□□□ -0.49
CALCOCO2-227ENST00000575560 GNASQ5JWF2 1037 aa11.98□□□□□ -0.49
CALCOCO2-227ENST00000575560 CCDC129Q6ZRS4 1044 aa11.98□□□□□ -0.49
CALCOCO2-227ENST00000575560 FAM126BQ8IXS8 530 aa11.98□□□□□ -0.49
CALCOCO2-227ENST00000575560 PPM1EQ8WY54 764 aa11.98□□□□□ -0.49
CALCOCO2-227ENST00000575560 HERVK_113Q902F9 699 aa11.98□□□□□ -0.49
CALCOCO2-227ENST00000575560 FGD4Q96M96 766 aa11.98□□□□□ -0.49
CALCOCO2-227ENST00000575560 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.98□□□□□ -0.49
CALCOCO2-227ENST00000575560 BOLA2Q9H3K6 86 aa11.98□□□□□ -0.49
CALCOCO2-227ENST00000575560 ABHD16BQ9H3Z7 469 aa11.98□□□□□ -0.49
CALCOCO2-227ENST00000575560 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.98□□□□□ -0.49
CALCOCO2-227ENST00000575560 NYAP2Q9P242 653 aa11.98□□□□□ -0.49
CALCOCO2-227ENST00000575560 SLC4A4Q9Y6R1 1079 aa11.98□□□□□ -0.49
CALCOCO2-227ENST00000575560 TRANK1O15050 2925 aa11.98□□□□□ -0.49
CALCOCO2-227ENST00000575560 RAD21O60216 631 aa11.97□□□□□ -0.49
CALCOCO2-227ENST00000575560 ACRP10323 421 aa11.97□□□□□ -0.49
CALCOCO2-227ENST00000575560 RASA1P20936 1047 aa11.97□□□□□ -0.49
CALCOCO2-227ENST00000575560 MRPS5P82675 430 aaKnown RBP11.97□□□□□ -0.49
CALCOCO2-227ENST00000575560 PSRC1Q6PGN9 363 aaPredicted RBP11.97□□□□□ -0.49
CALCOCO2-227ENST00000575560 SIRT2Q8IXJ6 389 aa11.97□□□□□ -0.49
CALCOCO2-227ENST00000575560 SLC43A3Q8NBI5 491 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms