RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 APOBEC3HQ6NTF7 200 aaKnown RBP20.13■□□□□ 0.81
CMTM3-214ENST00000567572 SRBD1Q8N5C6 995 aaKnown RBP20.13■□□□□ 0.81
CMTM3-214ENST00000567572 PNMA1Q8ND90 353 aa20.13■□□□□ 0.81
CMTM3-214ENST00000567572 ZNF397Q8NF99 534 aaPredicted RBP20.13■□□□□ 0.81
CMTM3-214ENST00000567572 DDX4Q9NQI0 724 aaKnown RBP20.13■□□□□ 0.81
CMTM3-214ENST00000567572 ZNF215Q9UL58 517 aaPredicted RBP20.13■□□□□ 0.81
CMTM3-214ENST00000567572 V9GY48 417 aaPredicted RBP20.13■□□□□ 0.81
CMTM3-214ENST00000567572 STX10O60499 249 aa20.12■□□□□ 0.81
CMTM3-214ENST00000567572 SLC16A10Q8TF71 515 aa20.12■□□□□ 0.81
CMTM3-214ENST00000567572 MRIQ9BWK5 157 aa20.12■□□□□ 0.81
CMTM3-214ENST00000567572 SRRTQ9BXP5 876 aaKnown RBP20.12■□□□□ 0.81
CMTM3-214ENST00000567572 INTS13Q9NVM9 706 aa20.12■□□□□ 0.81
CMTM3-214ENST00000567572 CALML3P27482 149 aa20.12■□□□□ 0.81
CMTM3-214ENST00000567572 NPY5RQ15761 445 aa20.12■□□□□ 0.81
CMTM3-214ENST00000567572 AOC3Q16853 763 aa20.12■□□□□ 0.81
CMTM3-214ENST00000567572 TTC38Q5R3I4 469 aa20.12■□□□□ 0.81
CMTM3-214ENST00000567572 CDC42EP5Q6NZY7 148 aa20.12■□□□□ 0.81
CMTM3-214ENST00000567572 NEDD1Q8NHV4 660 aa20.12■□□□□ 0.81
CMTM3-214ENST00000567572 SH3GLB2Q9NR46 395 aa20.12■□□□□ 0.81
CMTM3-214ENST00000567572 USP40Q9NVE5 1235 aa20.12■□□□□ 0.81
CMTM3-214ENST00000567572 KIF13BQ9NQT8 1826 aa20.11■□□□□ 0.81
CMTM3-214ENST00000567572 SCG2P13521 617 aa20.11■□□□□ 0.81
CMTM3-214ENST00000567572 CDK11BP21127 795 aaKnown RBP20.11■□□□□ 0.81
CMTM3-214ENST00000567572 CRKP46108 304 aa20.11■□□□□ 0.81
CMTM3-214ENST00000567572 GABPAQ06546 454 aa20.11■□□□□ 0.81
CMTM3-214ENST00000567572 FMR1Q06787 632 aaKnown RBP eCLIP20.11■□□□□ 0.81
CMTM3-214ENST00000567572 PICALMQ13492 652 aa20.11■□□□□ 0.81
CMTM3-214ENST00000567572 CCDC93Q567U6 631 aa20.11■□□□□ 0.81
CMTM3-214ENST00000567572 SUPT20HQ8NEM7 779 aa20.11■□□□□ 0.81
CMTM3-214ENST00000567572 ZDHHC15Q96MV8 337 aa20.11■□□□□ 0.81
CMTM3-214ENST00000567572 PLIN4Q96Q06 1357 aa20.11■□□□□ 0.81
CMTM3-214ENST00000567572 HDLBPQ00341 1268 aaKnown RBP20.1■□□□□ 0.81
CMTM3-214ENST00000567572 GRM4Q14833 912 aa20.1■□□□□ 0.81
CMTM3-214ENST00000567572 PFKFB3Q16875 520 aaPredicted RBP20.1■□□□□ 0.81
CMTM3-214ENST00000567572 SPATA1Q5VX52 437 aa20.1■□□□□ 0.81
CMTM3-214ENST00000567572 TMEM139Q8IV31 216 aa20.1■□□□□ 0.81
CMTM3-214ENST00000567572 CTAGE1Q96RT6 745 aa20.1■□□□□ 0.81
CMTM3-214ENST00000567572 OGFRQ9NZT2 677 aa20.1■□□□□ 0.81
CMTM3-214ENST00000567572 A0A1B0GTH6 734 aa20.1■□□□□ 0.81
CMTM3-214ENST00000567572 NOVP48745 357 aa20.1■□□□□ 0.81
CMTM3-214ENST00000567572 GRIPAP1Q4V328 841 aa20.1■□□□□ 0.81
CMTM3-214ENST00000567572 ARL6IP4Q66PJ3 421 aaKnown RBP20.1■□□□□ 0.81
CMTM3-214ENST00000567572 SYMPKQ92797 1274 aaKnown RBP20.1■□□□□ 0.81
CMTM3-214ENST00000567572 TMEM47Q9BQJ4 181 aa20.1■□□□□ 0.81
CMTM3-214ENST00000567572 hCG_1642624A0A1W2PR95 340 aa20.09■□□□□ 0.81
CMTM3-214ENST00000567572 TMEM232C9JQI7 657 aa20.09■□□□□ 0.81
CMTM3-214ENST00000567572 C21orf2O43822 256 aa20.09■□□□□ 0.81
CMTM3-214ENST00000567572 DPYDQ12882 1025 aa20.09■□□□□ 0.81
CMTM3-214ENST00000567572 HOMER1Q86YM7 354 aa20.09■□□□□ 0.81
CMTM3-214ENST00000567572 PDILTQ8N807 584 aa20.09■□□□□ 0.81
CMTM3-214ENST00000567572 DHX58Q96C10 678 aa20.09■□□□□ 0.81
CMTM3-214ENST00000567572 PAGE5Q96GU1 130 aa20.09■□□□□ 0.81
CMTM3-214ENST00000567572 SYNRGQ9UMZ2 1314 aa20.08■□□□□ 0.81
CMTM3-214ENST00000567572 PSME4Q14997 1843 aa20.08■□□□□ 0.81
CMTM3-214ENST00000567572 ATP2B1P20020 1258 aa20.08■□□□□ 0.81
CMTM3-214ENST00000567572 SYT10Q6XYQ8 523 aa20.08■□□□□ 0.81
CMTM3-214ENST00000567572 KIAA0825Q8IV33 1275 aa20.08■□□□□ 0.81
CMTM3-214ENST00000567572 TTLL6Q8N841 843 aa20.08■□□□□ 0.81
CMTM3-214ENST00000567572 BAG1Q99933 345 aaPredicted RBP20.08■□□□□ 0.81
CMTM3-214ENST00000567572 MAD2L2Q9UI95 211 aa20.08■□□□□ 0.81
CMTM3-214ENST00000567572 STX8Q9UNK0 236 aa20.08■□□□□ 0.81
CMTM3-214ENST00000567572 GNAQP50148 359 aa20.08■□□□□ 0.8
CMTM3-214ENST00000567572 SEMA3FQ13275 785 aa20.08■□□□□ 0.8
CMTM3-214ENST00000567572 CUL4BQ13620 913 aa20.08■□□□□ 0.8
CMTM3-214ENST00000567572 NR1I3Q14994 352 aa20.08■□□□□ 0.8
CMTM3-214ENST00000567572 EARS2Q5JPH6 523 aaKnown RBP20.08■□□□□ 0.8
CMTM3-214ENST00000567572 USP49Q70CQ1 688 aa20.08■□□□□ 0.8
CMTM3-214ENST00000567572 IQUBQ8NA54 791 aa20.08■□□□□ 0.8
CMTM3-214ENST00000567572 NAA15Q9BXJ9 866 aaKnown RBP20.08■□□□□ 0.8
CMTM3-214ENST00000567572 MYO3BQ8WXR4 1341 aa20.07■□□□□ 0.8
CMTM3-214ENST00000567572 FAM205CA6NFA0 338 aa20.07■□□□□ 0.8
CMTM3-214ENST00000567572 KCNA3P22001 575 aa20.07■□□□□ 0.8
CMTM3-214ENST00000567572 REXO1L1PQ8IX06 675 aa20.07■□□□□ 0.8
CMTM3-214ENST00000567572 PANX2Q96RD6 677 aa20.07■□□□□ 0.8
CMTM3-214ENST00000567572 MYH8P13535 1937 aa20.07■□□□□ 0.8
CMTM3-214ENST00000567572 CDKAL1Q5VV42 579 aa20.06■□□□□ 0.8
CMTM3-214ENST00000567572 GALNT17Q6IS24 598 aa20.06■□□□□ 0.8
CMTM3-214ENST00000567572 STAG2Q8N3U4 1231 aa20.06■□□□□ 0.8
CMTM3-214ENST00000567572 TC2NQ8N9U0 490 aa20.06■□□□□ 0.8
CMTM3-214ENST00000567572 EPSTI1Q96J88 318 aa20.06■□□□□ 0.8
CMTM3-214ENST00000567572 SERPINB13Q9UIV8 391 aa20.06■□□□□ 0.8
CMTM3-214ENST00000567572 SERPINA10Q9UK55 444 aa20.06■□□□□ 0.8
CMTM3-214ENST00000567572 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.06■□□□□ 0.8
CMTM3-214ENST00000567572 A0A087X0B3 334 aa20.06■□□□□ 0.8
CMTM3-214ENST00000567572 YDJCA8MPS7 323 aa20.06■□□□□ 0.8
CMTM3-214ENST00000567572 PPIP5K2O43314 1243 aa20.06■□□□□ 0.8
CMTM3-214ENST00000567572 NLRP5P59047 1200 aa20.06■□□□□ 0.8
CMTM3-214ENST00000567572 NFIAQ12857 509 aa20.06■□□□□ 0.8
CMTM3-214ENST00000567572 PTGDRQ13258 359 aa20.06■□□□□ 0.8
CMTM3-214ENST00000567572 TRIM65Q6PJ69 517 aa20.06■□□□□ 0.8
CMTM3-214ENST00000567572 GRAMD1CQ8IYS0 662 aa20.06■□□□□ 0.8
CMTM3-214ENST00000567572 CEP95Q96GE4 821 aa20.06■□□□□ 0.8
CMTM3-214ENST00000567572 MED15Q96RN5 788 aa20.06■□□□□ 0.8
CMTM3-214ENST00000567572 PSMD1Q99460 953 aa20.06■□□□□ 0.8
CMTM3-214ENST00000567572 SWAP70Q9UH65 585 aa20.06■□□□□ 0.8
CMTM3-214ENST00000567572 DNAI1Q9UI46 699 aa20.06■□□□□ 0.8
CMTM3-214ENST00000567572 DDX41Q9UJV9 622 aaKnown RBP20.06■□□□□ 0.8
CMTM3-214ENST00000567572 PPP2R2CQ9Y2T4 447 aa20.06■□□□□ 0.8
CMTM3-214ENST00000567572 PALM3A6NDB9 673 aaPredicted RBP20.05■□□□□ 0.8
CMTM3-214ENST00000567572 DPEP1P16444 411 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms