RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 ZNFX1Q9P2E3 1918 aaKnown RBP18.04■□□□□ 0.48
CMTM3-212ENST00000566121 DNAJC25-GNG10A0A024R161 153 aa18.03■□□□□ 0.48
CMTM3-212ENST00000566121 TSPY3P0CV98 308 aa18.03■□□□□ 0.48
CMTM3-212ENST00000566121 TSPY8P0CW00 308 aa18.03■□□□□ 0.48
CMTM3-212ENST00000566121 PCP11498 1178 aaKnown RBP18.03■□□□□ 0.48
CMTM3-212ENST00000566121 CHST13Q8NET6 341 aa18.03■□□□□ 0.48
CMTM3-212ENST00000566121 SYNGAP1Q96PV0 1343 aa18.02■□□□□ 0.48
CMTM3-212ENST00000566121 PRDM1O75626 825 aa18.02■□□□□ 0.48
CMTM3-212ENST00000566121 BMP3P12645 472 aa18.02■□□□□ 0.48
CMTM3-212ENST00000566121 TFAP4Q01664 338 aa18.02■□□□□ 0.48
CMTM3-212ENST00000566121 SNX17Q15036 470 aa18.02■□□□□ 0.48
CMTM3-212ENST00000566121 LRIT3Q3SXY7 679 aa18.02■□□□□ 0.48
CMTM3-212ENST00000566121 MCMDC2Q4G0Z9 681 aa18.02■□□□□ 0.48
CMTM3-212ENST00000566121 FAM160B2Q86V87 743 aa18.02■□□□□ 0.48
CMTM3-212ENST00000566121 CHURC1Q8WUH1 139 aa18.02■□□□□ 0.48
CMTM3-212ENST00000566121 TCP11L1Q9NUJ3 509 aa18.02■□□□□ 0.48
CMTM3-212ENST00000566121 CNGA1P29973 690 aa18.01■□□□□ 0.47
CMTM3-212ENST00000566121 LRRC26Q2I0M4 334 aa18.01■□□□□ 0.47
CMTM3-212ENST00000566121 SLFN13Q68D06 897 aa18.01■□□□□ 0.47
CMTM3-212ENST00000566121 RCSD1Q6JBY9 416 aa18.01■□□□□ 0.47
CMTM3-212ENST00000566121 C7orf61Q8IZ16 206 aa18.01■□□□□ 0.47
CMTM3-212ENST00000566121 TKFCQ3LXA3 575 aa18■□□□□ 0.47
CMTM3-212ENST00000566121 SNRNP48Q6IEG0 339 aaKnown RBP18■□□□□ 0.47
CMTM3-212ENST00000566121 STAG1Q8WVM7 1258 aa18■□□□□ 0.47
CMTM3-212ENST00000566121 COL11A1P12107 1806 aaPredicted RBP18■□□□□ 0.47
CMTM3-212ENST00000566121 FGAP02671 866 aa17.99■□□□□ 0.47
CMTM3-212ENST00000566121 ZNF865P0CJ78 1059 aaPredicted RBP17.99■□□□□ 0.47
CMTM3-212ENST00000566121 NUCB1Q02818 461 aa17.99■□□□□ 0.47
CMTM3-212ENST00000566121 NUP88Q99567 741 aaPredicted RBP17.99■□□□□ 0.47
CMTM3-212ENST00000566121 SENP6Q9GZR1 1112 aaPredicted RBP17.99■□□□□ 0.47
CMTM3-212ENST00000566121 IL17RBQ9NRM6 502 aa17.99■□□□□ 0.47
CMTM3-212ENST00000566121 RIPK3Q9Y572 518 aa17.99■□□□□ 0.47
CMTM3-212ENST00000566121 FRMPD3Q5JV73 1810 aa17.99■□□□□ 0.47
CMTM3-212ENST00000566121 KBTBD13C9JR72 458 aa17.98■□□□□ 0.47
CMTM3-212ENST00000566121 MAGEA10P43363 369 aaPredicted RBP17.98■□□□□ 0.47
CMTM3-212ENST00000566121 STAT2P52630 851 aa17.98■□□□□ 0.47
CMTM3-212ENST00000566121 MFAP1P55081 439 aaKnown RBP17.98■□□□□ 0.47
CMTM3-212ENST00000566121 LRRC41Q15345 812 aa17.98■□□□□ 0.47
CMTM3-212ENST00000566121 FAM47AQ5JRC9 791 aa17.98■□□□□ 0.47
CMTM3-212ENST00000566121 TSEN34Q9BSV6 310 aaKnown RBP17.98■□□□□ 0.47
CMTM3-212ENST00000566121 MYH4Q9Y623 1939 aa17.98■□□□□ 0.47
CMTM3-212ENST00000566121 LAMA2P24043 3122 aaKnown RBP17.97■□□□□ 0.47
CMTM3-212ENST00000566121 PGK2P07205 417 aa17.97■□□□□ 0.47
CMTM3-212ENST00000566121 HSPD1P10809 573 aaKnown RBP17.97■□□□□ 0.47
CMTM3-212ENST00000566121 RARBP10826 455 aa17.97■□□□□ 0.47
CMTM3-212ENST00000566121 AKR1A1P14550 325 aa17.97■□□□□ 0.47
CMTM3-212ENST00000566121 NKX3-2P78367 333 aa17.97■□□□□ 0.47
CMTM3-212ENST00000566121 BTNL9Q6UXG8 535 aa17.97■□□□□ 0.47
CMTM3-212ENST00000566121 SLC39A5Q6ZMH5 540 aa17.97■□□□□ 0.47
CMTM3-212ENST00000566121 CHD1LQ86WJ1 897 aa17.97■□□□□ 0.47
CMTM3-212ENST00000566121 DDX11Q96FC9 970 aa17.97■□□□□ 0.47
CMTM3-212ENST00000566121 TTC14Q96N46 770 aa17.97■□□□□ 0.47
CMTM3-212ENST00000566121 ZMYND8Q9ULU4 1186 aaPredicted RBP17.97■□□□□ 0.47
CMTM3-212ENST00000566121 PHF24Q9UPV7 400 aa17.97■□□□□ 0.47
CMTM3-212ENST00000566121 CNPY2Q9Y2B0 182 aa17.97■□□□□ 0.47
CMTM3-212ENST00000566121 SMCHD1A6NHR9 2005 aa17.97■□□□□ 0.47
CMTM3-212ENST00000566121 TSPY2A6NKD2 308 aa17.96■□□□□ 0.47
CMTM3-212ENST00000566121 TMEM232C9JQI7 657 aa17.96■□□□□ 0.47
CMTM3-212ENST00000566121 RAD21O60216 631 aa17.96■□□□□ 0.47
CMTM3-212ENST00000566121 SLC1A4P43007 532 aa17.96■□□□□ 0.47
CMTM3-212ENST00000566121 PRAMEF19Q5SWL8 479 aa17.96■□□□□ 0.47
CMTM3-212ENST00000566121 VPS53Q5VIR6 699 aa17.96■□□□□ 0.47
CMTM3-212ENST00000566121 CCDC129Q6ZRS4 1044 aa17.96■□□□□ 0.47
CMTM3-212ENST00000566121 RNF180Q86T96 592 aa17.96■□□□□ 0.47
CMTM3-212ENST00000566121 PLEKHM2Q8IWE5 1019 aa17.96■□□□□ 0.47
CMTM3-212ENST00000566121 TDHQ8IZJ6 230 aa17.96■□□□□ 0.47
CMTM3-212ENST00000566121 STK11IPQ8N1F8 1099 aa17.96■□□□□ 0.47
CMTM3-212ENST00000566121 DCAF4Q8WV16 495 aa17.96■□□□□ 0.47
CMTM3-212ENST00000566121 KIFC2Q96AC6 838 aa17.96■□□□□ 0.47
CMTM3-212ENST00000566121 MAF1Q9H063 256 aa17.96■□□□□ 0.47
CMTM3-212ENST00000566121 ABHD16BQ9H3Z7 469 aa17.96■□□□□ 0.47
CMTM3-212ENST00000566121 PNMA2Q9UL42 364 aa17.96■□□□□ 0.47
CMTM3-212ENST00000566121 CTDP1Q9Y5B0 961 aaPredicted RBP17.96■□□□□ 0.47
CMTM3-212ENST00000566121 LOC102724159A0A0B4J2E5 919 aa17.95■□□□□ 0.46
CMTM3-212ENST00000566121 A0A0D9SFI3 127 aa17.95■□□□□ 0.46
CMTM3-212ENST00000566121 SNAI1O95863 264 aaPredicted RBP17.95■□□□□ 0.46
CMTM3-212ENST00000566121 PWP2Q15269 919 aaKnown RBP17.95■□□□□ 0.46
CMTM3-212ENST00000566121 GJC2Q5T442 439 aaPredicted RBP17.95■□□□□ 0.46
CMTM3-212ENST00000566121 LRRC47Q8N1G4 583 aaKnown RBP17.95■□□□□ 0.46
CMTM3-212ENST00000566121 KLHDC9Q8NEP7 349 aa17.95■□□□□ 0.46
CMTM3-212ENST00000566121 FAM227BQ96M60 508 aa17.95■□□□□ 0.46
CMTM3-212ENST00000566121 LNPKQ9C0E8 428 aa17.95■□□□□ 0.46
CMTM3-212ENST00000566121 FAM184BQ9ULE4 1060 aa17.95■□□□□ 0.46
CMTM3-212ENST00000566121 TACC3Q9Y6A5 838 aa17.95■□□□□ 0.46
CMTM3-212ENST00000566121 ZNF536O15090 1300 aa17.95■□□□□ 0.46
CMTM3-212ENST00000566121 HIP1O00291 1037 aa17.94■□□□□ 0.46
CMTM3-212ENST00000566121 ADAMTS4O75173 837 aa17.94■□□□□ 0.46
CMTM3-212ENST00000566121 DUSP11O75319 330 aaKnown RBP17.94■□□□□ 0.46
CMTM3-212ENST00000566121 CST5P28325 142 aaPredicted RBP17.94■□□□□ 0.46
CMTM3-212ENST00000566121 CTDSPL2Q05D32 466 aa17.94■□□□□ 0.46
CMTM3-212ENST00000566121 SAMD1Q6SPF0 538 aaPredicted RBP17.94■□□□□ 0.46
CMTM3-212ENST00000566121 ANKRD35Q8N283 1001 aa17.94■□□□□ 0.46
CMTM3-212ENST00000566121 FAM133AQ8N9E0 248 aa17.94■□□□□ 0.46
CMTM3-212ENST00000566121 TOX2Q96NM4 488 aa17.94■□□□□ 0.46
CMTM3-212ENST00000566121 ACAD9Q9H845 621 aa17.94■□□□□ 0.46
CMTM3-212ENST00000566121 RAVER2Q9HCJ3 691 aaKnown RBP17.94■□□□□ 0.46
CMTM3-212ENST00000566121 XPNPEP3Q9NQH7 507 aa17.94■□□□□ 0.46
CMTM3-212ENST00000566121 STX8Q9UNK0 236 aa17.94■□□□□ 0.46
CMTM3-212ENST00000566121 CCDC171Q6TFL3 1326 aa17.94■□□□□ 0.46
CMTM3-212ENST00000566121 PLXNA1Q9UIW2 1896 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms