RNA–Protein interactions for RNA: ENST00000562515.2

AC055876.4-201, humanhuman

BASIC

Gene AC055876.4, Length 712 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.4-201ENST00000562515 TMEM39AQ9NV64 488 aa11.41□□□□□ -0.58
AC055876.4-201ENST00000562515 ZNF214Q9UL59 606 aaPredicted RBP11.41□□□□□ -0.58
AC055876.4-201ENST00000562515 DIS3Q9Y2L1 958 aaKnown RBP11.41□□□□□ -0.58
AC055876.4-201ENST00000562515 SYNRGQ9UMZ2 1314 aa11.4□□□□□ -0.58
AC055876.4-201ENST00000562515 TRIM43BA6NCK2 446 aa11.4□□□□□ -0.58
AC055876.4-201ENST00000562515 DCDC2CA8MYV0 355 aa11.4□□□□□ -0.58
AC055876.4-201ENST00000562515 SMARCA5O60264 1052 aaPredicted RBP11.4□□□□□ -0.58
AC055876.4-201ENST00000562515 ZBED4O75132 1171 aa11.4□□□□□ -0.58
AC055876.4-201ENST00000562515 CHGBP05060 677 aa11.4□□□□□ -0.58
AC055876.4-201ENST00000562515 APPP05067 770 aa11.4□□□□□ -0.58
AC055876.4-201ENST00000562515 TAL1P17542 331 aaPredicted RBP11.4□□□□□ -0.58
AC055876.4-201ENST00000562515 SMAD3P84022 425 aaKnown RBP11.4□□□□□ -0.58
AC055876.4-201ENST00000562515 IKQ13123 557 aaPredicted RBP11.4□□□□□ -0.58
AC055876.4-201ENST00000562515 ZNF792Q3KQV3 632 aa11.4□□□□□ -0.58
AC055876.4-201ENST00000562515 C1orf53Q5VUE5 145 aa11.4□□□□□ -0.58
AC055876.4-201ENST00000562515 SIAH1Q8IUQ4 282 aa11.4□□□□□ -0.58
AC055876.4-201ENST00000562515 SIRT2Q8IXJ6 389 aa11.4□□□□□ -0.58
AC055876.4-201ENST00000562515 MYLIPQ8WY64 445 aa11.4□□□□□ -0.58
AC055876.4-201ENST00000562515 KIFC2Q96AC6 838 aa11.4□□□□□ -0.58
AC055876.4-201ENST00000562515 VTI1AQ96AJ9 217 aa11.4□□□□□ -0.58
AC055876.4-201ENST00000562515 TRIM43Q96BQ3 446 aaPredicted RBP11.4□□□□□ -0.58
AC055876.4-201ENST00000562515 CDX2Q99626 313 aaPredicted RBP11.4□□□□□ -0.58
AC055876.4-201ENST00000562515 COL25A1Q9BXS0 654 aaPredicted RBP11.4□□□□□ -0.58
AC055876.4-201ENST00000562515 SPC25Q9HBM1 224 aa11.4□□□□□ -0.58
AC055876.4-201ENST00000562515 FAM184BQ9ULE4 1060 aa11.4□□□□□ -0.58
AC055876.4-201ENST00000562515 MROH7Q68CQ1 1323 aa11.39□□□□□ -0.59
AC055876.4-201ENST00000562515 SYNGAP1Q96PV0 1343 aa11.39□□□□□ -0.59
AC055876.4-201ENST00000562515 MOXD2PA6NHM9 499 aa11.39□□□□□ -0.59
AC055876.4-201ENST00000562515 LRRC37A2A6NM11 1700 aa11.39□□□□□ -0.59
AC055876.4-201ENST00000562515 C6orf222P0C671 652 aaPredicted RBP11.39□□□□□ -0.59
AC055876.4-201ENST00000562515 ZNF865P0CJ78 1059 aaPredicted RBP11.39□□□□□ -0.59
AC055876.4-201ENST00000562515 RASA1P20936 1047 aa11.39□□□□□ -0.59
AC055876.4-201ENST00000562515 ACLYP53396 1101 aa11.39□□□□□ -0.59
AC055876.4-201ENST00000562515 LRRFIP1Q32MZ4 808 aaKnown RBP11.39□□□□□ -0.59
AC055876.4-201ENST00000562515 DIEXFQ68CQ4 756 aaKnown RBP11.39□□□□□ -0.59
AC055876.4-201ENST00000562515 ZNF444Q8N0Y2 327 aaPredicted RBP11.39□□□□□ -0.59
AC055876.4-201ENST00000562515 ANKRD35Q8N283 1001 aa11.39□□□□□ -0.59
AC055876.4-201ENST00000562515 MSL3Q8N5Y2 521 aaKnown RBP11.39□□□□□ -0.59
AC055876.4-201ENST00000562515 GLT1D1Q96MS3 346 aa11.39□□□□□ -0.59
AC055876.4-201ENST00000562515 ECHDC1Q9NTX5 307 aa11.39□□□□□ -0.59
AC055876.4-201ENST00000562515 CLIP2Q9UDT6 1046 aa11.39□□□□□ -0.59
AC055876.4-201ENST00000562515 ADAMTS5Q9UNA0 930 aa11.39□□□□□ -0.59
AC055876.4-201ENST00000562515 F5H6K3 240 aa11.38□□□□□ -0.59
AC055876.4-201ENST00000562515 TLR3O15455 904 aaKnown RBP11.38□□□□□ -0.59
AC055876.4-201ENST00000562515 ADAMTS4O75173 837 aa11.38□□□□□ -0.59
AC055876.4-201ENST00000562515 NDUFB10O96000 172 aa11.38□□□□□ -0.59
AC055876.4-201ENST00000562515 KLRC3Q07444 240 aa11.38□□□□□ -0.59
AC055876.4-201ENST00000562515 CCDC174Q6PII3 467 aa11.38□□□□□ -0.59
AC055876.4-201ENST00000562515 LRRC47Q8N1G4 583 aaKnown RBP11.38□□□□□ -0.59
AC055876.4-201ENST00000562515 PRPF38AQ8NAV1 312 aaKnown RBP11.38□□□□□ -0.59
AC055876.4-201ENST00000562515 APPBP2Q92624 585 aa11.38□□□□□ -0.59
AC055876.4-201ENST00000562515 TSEN34Q9BSV6 310 aaKnown RBP11.38□□□□□ -0.59
AC055876.4-201ENST00000562515 SEMA6BQ9H3T3 888 aa11.38□□□□□ -0.59
AC055876.4-201ENST00000562515 RAVER2Q9HCJ3 691 aaKnown RBP11.38□□□□□ -0.59
AC055876.4-201ENST00000562515 HOMER2Q9NSB8 354 aa11.38□□□□□ -0.59
AC055876.4-201ENST00000562515 NYAP2Q9P242 653 aa11.38□□□□□ -0.59
AC055876.4-201ENST00000562515 FBXO40Q9UH90 709 aa11.38□□□□□ -0.59
AC055876.4-201ENST00000562515 RCAN3Q9UKA8 241 aa11.38□□□□□ -0.59
AC055876.4-201ENST00000562515 GBF1Q92538 1859 aa11.38□□□□□ -0.59
AC055876.4-201ENST00000562515 TMEM265A0A087WTH1 108 aa11.37□□□□□ -0.59
AC055876.4-201ENST00000562515 GPAA1O43292 621 aa11.37□□□□□ -0.59
AC055876.4-201ENST00000562515 PRDM1O75626 825 aa11.37□□□□□ -0.59
AC055876.4-201ENST00000562515 ZFYP08048 801 aaPredicted RBP11.37□□□□□ -0.59
AC055876.4-201ENST00000562515 SLC3A2P08195 630 aaKnown RBP11.37□□□□□ -0.59
AC055876.4-201ENST00000562515 TSPY3P0CV98 308 aa11.37□□□□□ -0.59
AC055876.4-201ENST00000562515 TSPY8P0CW00 308 aa11.37□□□□□ -0.59
AC055876.4-201ENST00000562515 GNAT2P19087 354 aa11.37□□□□□ -0.59
AC055876.4-201ENST00000562515 SBK1Q52WX2 424 aa11.37□□□□□ -0.59
AC055876.4-201ENST00000562515 CCDC129Q6ZRS4 1044 aa11.37□□□□□ -0.59
AC055876.4-201ENST00000562515 NOL8Q76FK4 1167 aaKnown RBP11.37□□□□□ -0.59
AC055876.4-201ENST00000562515 KBTBD3Q8NAB2 608 aa11.37□□□□□ -0.59
AC055876.4-201ENST00000562515 PCSK9Q8NBP7 692 aaKnown RBP11.37□□□□□ -0.59
AC055876.4-201ENST00000562515 REPS2Q8NFH8 660 aa11.37□□□□□ -0.59
AC055876.4-201ENST00000562515 STRBPQ96SI9 672 aaKnown RBP11.37□□□□□ -0.59
AC055876.4-201ENST00000562515 NACAP1Q9BZK3 213 aa11.37□□□□□ -0.59
AC055876.4-201ENST00000562515 FEM1BQ9UK73 627 aa11.37□□□□□ -0.59
AC055876.4-201ENST00000562515 UNC80Q8N2C7 3258 aa11.36□□□□□ -0.59
AC055876.4-201ENST00000562515 A0A0U1RQG5 324 aaPredicted RBP11.36□□□□□ -0.59
AC055876.4-201ENST00000562515 GSG1L2A8MUP6 293 aa11.36□□□□□ -0.59
AC055876.4-201ENST00000562515 KIAA0355O15063 1070 aa11.36□□□□□ -0.59
AC055876.4-201ENST00000562515 RNF113AO15541 343 aaKnown RBP11.36□□□□□ -0.59
AC055876.4-201ENST00000562515 DUSP11O75319 330 aaKnown RBP11.36□□□□□ -0.59
AC055876.4-201ENST00000562515 TTLL1O95922 423 aa11.36□□□□□ -0.59
AC055876.4-201ENST00000562515 DNAJB2P25686 324 aa11.36□□□□□ -0.59
AC055876.4-201ENST00000562515 ITGB8P26012 769 aa11.36□□□□□ -0.59
AC055876.4-201ENST00000562515 PDE4BQ07343 736 aa11.36□□□□□ -0.59
AC055876.4-201ENST00000562515 ACVR2BQ13705 512 aa11.36□□□□□ -0.59
AC055876.4-201ENST00000562515 KCNA10Q16322 511 aa11.36□□□□□ -0.59
AC055876.4-201ENST00000562515 TSHZ3Q63HK5 1081 aa11.36□□□□□ -0.59
AC055876.4-201ENST00000562515 GIMAP6Q6P9H5 292 aa11.36□□□□□ -0.59
AC055876.4-201ENST00000562515 ARMCX2Q7L311 632 aa11.36□□□□□ -0.59
AC055876.4-201ENST00000562515 ZNF467Q7Z7K2 595 aaPredicted RBP11.36□□□□□ -0.59
AC055876.4-201ENST00000562515 CEP95Q96GE4 821 aa11.36□□□□□ -0.59
AC055876.4-201ENST00000562515 PPP1R12CQ9BZL4 782 aa11.36□□□□□ -0.59
AC055876.4-201ENST00000562515 NAPBQ9H115 298 aa11.36□□□□□ -0.59
AC055876.4-201ENST00000562515 TTYH1Q9H313 450 aaPredicted RBP11.36□□□□□ -0.59
AC055876.4-201ENST00000562515 ABHD16BQ9H3Z7 469 aa11.36□□□□□ -0.59
AC055876.4-201ENST00000562515 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.36□□□□□ -0.59
AC055876.4-201ENST00000562515 RIPK3Q9Y572 518 aa11.36□□□□□ -0.59
AC055876.4-201ENST00000562515 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms