RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 SPATC1LQ9H0A9 340 aa18.2■□□□□ 0.5
RABGGTA-219ENST00000560871 FEM1BQ9UK73 627 aa18.2■□□□□ 0.5
RABGGTA-219ENST00000560871 ZNF214Q9UL59 606 aaPredicted RBP18.2■□□□□ 0.5
RABGGTA-219ENST00000560871 ZNF236Q9UL36 1845 aa18.19■□□□□ 0.5
RABGGTA-219ENST00000560871 TMEM232C9JQI7 657 aa18.19■□□□□ 0.5
RABGGTA-219ENST00000560871 REC8O95072 547 aa18.19■□□□□ 0.5
RABGGTA-219ENST00000560871 HSPA4P34932 840 aa18.19■□□□□ 0.5
RABGGTA-219ENST00000560871 STAT2P52630 851 aa18.19■□□□□ 0.5
RABGGTA-219ENST00000560871 TSGA10IPQ3SY00 556 aa18.19■□□□□ 0.5
RABGGTA-219ENST00000560871 RNF20Q5VTR2 975 aa18.19■□□□□ 0.5
RABGGTA-219ENST00000560871 KCTD1Q719H9 257 aa18.19■□□□□ 0.5
RABGGTA-219ENST00000560871 PRPF38AQ8NAV1 312 aaKnown RBP18.19■□□□□ 0.5
RABGGTA-219ENST00000560871 PNMA1Q8ND90 353 aa18.19■□□□□ 0.5
RABGGTA-219ENST00000560871 KCNB2Q92953 911 aa18.19■□□□□ 0.5
RABGGTA-219ENST00000560871 MOV10L1Q9BXT6 1211 aaKnown RBP18.19■□□□□ 0.5
RABGGTA-219ENST00000560871 SGPL1O95470 568 aa18.18■□□□□ 0.5
RABGGTA-219ENST00000560871 CCNA1P78396 465 aa18.18■□□□□ 0.5
RABGGTA-219ENST00000560871 ZNF543Q08ER8 600 aa18.18■□□□□ 0.5
RABGGTA-219ENST00000560871 CCDC96Q2M329 555 aa18.18■□□□□ 0.5
RABGGTA-219ENST00000560871 IFIT1BQ5T764 474 aaKnown RBP18.18■□□□□ 0.5
RABGGTA-219ENST00000560871 SAMD1Q6SPF0 538 aaPredicted RBP18.18■□□□□ 0.5
RABGGTA-219ENST00000560871 CHST3Q7LGC8 479 aa18.18■□□□□ 0.5
RABGGTA-219ENST00000560871 GPR142Q7Z601 462 aa18.18■□□□□ 0.5
RABGGTA-219ENST00000560871 FAM160B2Q86V87 743 aa18.18■□□□□ 0.5
RABGGTA-219ENST00000560871 USP6NLQ92738 828 aa18.18■□□□□ 0.5
RABGGTA-219ENST00000560871 CHMP4CQ96CF2 233 aa18.18■□□□□ 0.5
RABGGTA-219ENST00000560871 NUDT12Q9BQG2 462 aa18.18■□□□□ 0.5
RABGGTA-219ENST00000560871 KAT14Q9H8E8 782 aa18.18■□□□□ 0.5
RABGGTA-219ENST00000560871 SLC38A10Q9HBR0 1119 aa18.18■□□□□ 0.5
RABGGTA-219ENST00000560871 MTMR7Q9Y216 660 aa18.18■□□□□ 0.5
RABGGTA-219ENST00000560871 XRCC5P13010 732 aaKnown RBP18.17■□□□□ 0.5
RABGGTA-219ENST00000560871 CYP2B6P20813 491 aa18.17■□□□□ 0.5
RABGGTA-219ENST00000560871 ADCK5Q3MIX3 580 aa18.17■□□□□ 0.5
RABGGTA-219ENST00000560871 MORN1Q5T089 497 aa18.17■□□□□ 0.5
RABGGTA-219ENST00000560871 BTNL9Q6UXG8 535 aa18.17■□□□□ 0.5
RABGGTA-219ENST00000560871 PLEKHH3Q7Z736 793 aa18.17■□□□□ 0.5
RABGGTA-219ENST00000560871 SHCBP1Q8NEM2 672 aa18.17■□□□□ 0.5
RABGGTA-219ENST00000560871 IGDCC4Q8TDY8 1250 aa18.17■□□□□ 0.5
RABGGTA-219ENST00000560871 U2AF1L4Q8WU68 220 aaKnown RBP18.17■□□□□ 0.5
RABGGTA-219ENST00000560871 SOCS4Q8WXH5 440 aa18.17■□□□□ 0.5
RABGGTA-219ENST00000560871 KIFC2Q96AC6 838 aa18.17■□□□□ 0.5
RABGGTA-219ENST00000560871 MTA3Q9BTC8 594 aa18.17■□□□□ 0.5
RABGGTA-219ENST00000560871 SENP2Q9HC62 589 aa18.17■□□□□ 0.5
RABGGTA-219ENST00000560871 PAK6Q9NQU5 681 aaPredicted RBP18.17■□□□□ 0.5
RABGGTA-219ENST00000560871 FRMPD2Q68DX3 1309 aaPredicted RBP18.17■□□□□ 0.5
RABGGTA-219ENST00000560871 IFIT3O14879 490 aaKnown RBP18.16■□□□□ 0.5
RABGGTA-219ENST00000560871 ATP2A1O14983 1001 aa18.16■□□□□ 0.5
RABGGTA-219ENST00000560871 PRC1O43663 620 aa18.16■□□□□ 0.5
RABGGTA-219ENST00000560871 HMGCRP04035 888 aa18.16■□□□□ 0.5
RABGGTA-219ENST00000560871 CAPN2P17655 700 aa18.16■□□□□ 0.5
RABGGTA-219ENST00000560871 TTBK2Q6IQ55 1244 aa18.16■□□□□ 0.5
RABGGTA-219ENST00000560871 UBE2Q1Q7Z7E8 422 aa18.16■□□□□ 0.5
RABGGTA-219ENST00000560871 RIOX2Q8IUF8 465 aa18.16■□□□□ 0.5
RABGGTA-219ENST00000560871 CCAR1Q8IX12 1150 aaKnown RBP18.16■□□□□ 0.5
RABGGTA-219ENST00000560871 CHURC1Q8WUH1 139 aa18.16■□□□□ 0.5
RABGGTA-219ENST00000560871 TRIB2Q92519 343 aa18.16■□□□□ 0.5
RABGGTA-219ENST00000560871 PRR12Q9ULL5 1215 aa18.16■□□□□ 0.5
RABGGTA-219ENST00000560871 BRCA2P51587 3418 aa18.15■□□□□ 0.5
RABGGTA-219ENST00000560871 SH2B2O14492 632 aaPredicted RBP18.15■□□□□ 0.5
RABGGTA-219ENST00000560871 FDX1P10109 184 aa18.15■□□□□ 0.5
RABGGTA-219ENST00000560871 ERCC3P19447 782 aa18.15■□□□□ 0.5
RABGGTA-219ENST00000560871 MCM5P33992 734 aa18.15■□□□□ 0.5
RABGGTA-219ENST00000560871 TRIM32Q13049 653 aa18.15■□□□□ 0.5
RABGGTA-219ENST00000560871 WTAPQ15007 396 aa18.15■□□□□ 0.5
RABGGTA-219ENST00000560871 SART3Q15020 963 aaKnown RBP18.15■□□□□ 0.5
RABGGTA-219ENST00000560871 NEK1Q96PY6 1258 aa18.15■□□□□ 0.5
RABGGTA-219ENST00000560871 LY9Q9HBG7 655 aa18.15■□□□□ 0.5
RABGGTA-219ENST00000560871 ISY1Q9ULR0 285 aaKnown RBP18.15■□□□□ 0.5
RABGGTA-219ENST00000560871 SNX14Q9Y5W7 946 aa18.15■□□□□ 0.5
RABGGTA-219ENST00000560871 ZNF536O15090 1300 aa18.15■□□□□ 0.5
RABGGTA-219ENST00000560871 ERICH2A1L162 156 aa18.14■□□□□ 0.49
RABGGTA-219ENST00000560871 ZBED4O75132 1171 aa18.14■□□□□ 0.49
RABGGTA-219ENST00000560871 ZKSCAN1P17029 563 aaPredicted RBP18.14■□□□□ 0.49
RABGGTA-219ENST00000560871 RGS2P41220 211 aa18.14■□□□□ 0.49
RABGGTA-219ENST00000560871 OAZ1P54368 228 aa18.14■□□□□ 0.49
RABGGTA-219ENST00000560871 GRB14Q14449 540 aa18.14■□□□□ 0.49
RABGGTA-219ENST00000560871 KRT32Q14532 448 aa18.14■□□□□ 0.49
RABGGTA-219ENST00000560871 PLS1Q14651 629 aa18.14■□□□□ 0.49
RABGGTA-219ENST00000560871 TMEM67Q5HYA8 995 aa18.14■□□□□ 0.49
RABGGTA-219ENST00000560871 GPATCH4Q5T3I0 446 aaKnown RBP18.14■□□□□ 0.49
RABGGTA-219ENST00000560871 TRMT44Q8IYL2 757 aaKnown RBP18.14■□□□□ 0.49
RABGGTA-219ENST00000560871 TMEM87BQ96K49 555 aa18.14■□□□□ 0.49
RABGGTA-219ENST00000560871 DEFB118Q96PH6 123 aa18.14■□□□□ 0.49
RABGGTA-219ENST00000560871 TEX13BQ9BXU2 312 aa18.14■□□□□ 0.49
RABGGTA-219ENST00000560871 USP26Q9BXU7 913 aa18.14■□□□□ 0.49
RABGGTA-219ENST00000560871 CRISPLD2Q9H0B8 497 aa18.14■□□□□ 0.49
RABGGTA-219ENST00000560871 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.14■□□□□ 0.49
RABGGTA-219ENST00000560871 RANBP17Q9H2T7 1088 aaKnown RBP18.14■□□□□ 0.49
RABGGTA-219ENST00000560871 MROH8Q9H579 483 aa18.14■□□□□ 0.49
RABGGTA-219ENST00000560871 GPCPD1Q9NPB8 672 aa18.14■□□□□ 0.49
RABGGTA-219ENST00000560871 GPHNQ9NQX3 736 aaPredicted RBP18.14■□□□□ 0.49
RABGGTA-219ENST00000560871 RPTORQ8N122 1335 aa18.14■□□□□ 0.49
RABGGTA-219ENST00000560871 SLC15A5A6NIM6 579 aa18.13■□□□□ 0.49
RABGGTA-219ENST00000560871 SLC25A27O95847 323 aa18.13■□□□□ 0.49
RABGGTA-219ENST00000560871 GOLGA8HP0CJ92 632 aa18.13■□□□□ 0.49
RABGGTA-219ENST00000560871 PTPREP23469 700 aa18.13■□□□□ 0.49
RABGGTA-219ENST00000560871 SLC16A2P36021 539 aa18.13■□□□□ 0.49
RABGGTA-219ENST00000560871 STAT3P40763 770 aa18.13■□□□□ 0.49
RABGGTA-219ENST00000560871 IKQ13123 557 aaPredicted RBP18.13■□□□□ 0.49
RABGGTA-219ENST00000560871 MAP2K5Q13163 448 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms