RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 CHMLP26374 656 aa26.78■■□□□ 1.88
PABPN1-207ENST00000556821 PLS1Q14651 629 aa26.78■■□□□ 1.88
PABPN1-207ENST00000556821 CCL14Q16627 93 aa26.78■■□□□ 1.88
PABPN1-207ENST00000556821 RRP12Q5JTH9 1297 aaKnown RBP26.78■■□□□ 1.88
PABPN1-207ENST00000556821 CENPQQ7L2Z9 268 aaPredicted RBP26.78■■□□□ 1.88
PABPN1-207ENST00000556821 SLF1Q9BQI6 1058 aa26.78■■□□□ 1.88
PABPN1-207ENST00000556821 CWC22Q9HCG8 908 aaKnown RBP26.78■■□□□ 1.88
PABPN1-207ENST00000556821 ZNF214Q9UL59 606 aaPredicted RBP26.78■■□□□ 1.88
PABPN1-207ENST00000556821 STX8Q9UNK0 236 aa26.78■■□□□ 1.88
PABPN1-207ENST00000556821 NEDD4P46934 1319 aa26.78■■□□□ 1.88
PABPN1-207ENST00000556821 RAD50Q92878 1312 aa26.78■■□□□ 1.88
PABPN1-207ENST00000556821 SLFN13Q68D06 897 aa26.77■■□□□ 1.88
PABPN1-207ENST00000556821 RASGRP2Q7LDG7 609 aa26.77■■□□□ 1.88
PABPN1-207ENST00000556821 SKAP1Q86WV1 359 aa26.77■■□□□ 1.88
PABPN1-207ENST00000556821 PCP11498 1178 aaKnown RBP26.76■■□□□ 1.87
PABPN1-207ENST00000556821 MAP3K21Q5TCX8 1036 aa26.76■■□□□ 1.87
PABPN1-207ENST00000556821 MFSD6Q6ZSS7 791 aa26.76■■□□□ 1.87
PABPN1-207ENST00000556821 NECAB2Q7Z6G3 386 aa26.76■■□□□ 1.87
PABPN1-207ENST00000556821 DIS3LQ8TF46 1054 aaKnown RBP26.76■■□□□ 1.87
PABPN1-207ENST00000556821 IVNS1ABPQ9Y6Y0 642 aa26.76■■□□□ 1.87
PABPN1-207ENST00000556821 LCTP09848 1927 aa26.76■■□□□ 1.87
PABPN1-207ENST00000556821 HOXC6P09630 235 aa26.75■■□□□ 1.87
PABPN1-207ENST00000556821 PPP4R3BQ5MIZ7 849 aa26.75■■□□□ 1.87
PABPN1-207ENST00000556821 ZNF213O14771 459 aa26.74■■□□□ 1.87
PABPN1-207ENST00000556821 BMP3P12645 472 aa26.74■■□□□ 1.87
PABPN1-207ENST00000556821 ZKSCAN1P17029 563 aaPredicted RBP26.74■■□□□ 1.87
PABPN1-207ENST00000556821 NCAPG2Q86XI2 1143 aa26.74■■□□□ 1.87
PABPN1-207ENST00000556821 RIOX2Q8IUF8 465 aa26.74■■□□□ 1.87
PABPN1-207ENST00000556821 PRPF38AQ8NAV1 312 aaKnown RBP26.74■■□□□ 1.87
PABPN1-207ENST00000556821 NPLOC4Q8TAT6 608 aa26.74■■□□□ 1.87
PABPN1-207ENST00000556821 GMCL1Q96IK5 515 aa26.74■■□□□ 1.87
PABPN1-207ENST00000556821 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.74■■□□□ 1.872e-38■□□□□ 10.5
PABPN1-207ENST00000556821 MROH8Q9H579 483 aa26.74■■□□□ 1.87
PABPN1-207ENST00000556821 TCP11L1Q9NUJ3 509 aa26.74■■□□□ 1.87
PABPN1-207ENST00000556821 FLRT1Q9NZU1 646 aa26.74■■□□□ 1.87
PABPN1-207ENST00000556821 RCSD1Q6JBY9 416 aa26.73■■□□□ 1.87
PABPN1-207ENST00000556821 TRMT44Q8IYL2 757 aaKnown RBP26.73■■□□□ 1.87
PABPN1-207ENST00000556821 RNF41Q9H4P4 317 aaPredicted RBP26.73■■□□□ 1.87
PABPN1-207ENST00000556821 FEM1BQ9UK73 627 aa26.73■■□□□ 1.87
PABPN1-207ENST00000556821 ZMYND8Q9ULU4 1186 aaPredicted RBP26.73■■□□□ 1.87
PABPN1-207ENST00000556821 RPTORQ8N122 1335 aa26.72■■□□□ 1.87
PABPN1-207ENST00000556821 STRNO43815 780 aa26.72■■□□□ 1.87
PABPN1-207ENST00000556821 PRKAR2AP13861 404 aaKnown RBP26.72■■□□□ 1.87
PABPN1-207ENST00000556821 ADORA2AP29274 412 aa26.72■■□□□ 1.87
PABPN1-207ENST00000556821 ANKLE1Q8NAG6 615 aa26.72■■□□□ 1.87
PABPN1-207ENST00000556821 KIFC2Q96AC6 838 aa26.72■■□□□ 1.87
PABPN1-207ENST00000556821 CHMP4CQ96CF2 233 aa26.72■■□□□ 1.87
PABPN1-207ENST00000556821 SLC25A27O95847 323 aa26.71■■□□□ 1.87
PABPN1-207ENST00000556821 IGHA2P01877 340 aa26.71■■□□□ 1.87
PABPN1-207ENST00000556821 MCCP23508 829 aa26.71■■□□□ 1.87
PABPN1-207ENST00000556821 STAT3P40763 770 aa26.71■■□□□ 1.87
PABPN1-207ENST00000556821 SLC1A4P43007 532 aa26.71■■□□□ 1.87
PABPN1-207ENST00000556821 C7orf61Q8IZ16 206 aa26.71■■□□□ 1.87
PABPN1-207ENST00000556821 TDHQ8IZJ6 230 aa26.71■■□□□ 1.87
PABPN1-207ENST00000556821 RUFY2Q8WXA3 655 aa26.71■■□□□ 1.87
PABPN1-207ENST00000556821 TMEM47Q9BQJ4 181 aa26.71■■□□□ 1.87
PABPN1-207ENST00000556821 TMEM232C9JQI7 657 aa26.7■■□□□ 1.86
PABPN1-207ENST00000556821 SGSM2O43147 1006 aa26.7■■□□□ 1.86
PABPN1-207ENST00000556821 COBLO75128 1261 aa26.7■■□□□ 1.86
PABPN1-207ENST00000556821 MAGEA10P43363 369 aaPredicted RBP26.7■■□□□ 1.86
PABPN1-207ENST00000556821 PTH1RQ03431 593 aa26.7■■□□□ 1.86
PABPN1-207ENST00000556821 CACNB2Q08289 660 aaPredicted RBP26.7■■□□□ 1.86
PABPN1-207ENST00000556821 IMMTQ16891 758 aaKnown RBP26.7■■□□□ 1.86
PABPN1-207ENST00000556821 ABRAQ8N0Z2 381 aa26.7■■□□□ 1.86
PABPN1-207ENST00000556821 SLC38A10Q9HBR0 1119 aa26.7■■□□□ 1.86
PABPN1-207ENST00000556821 HMX1Q9NP08 348 aaPredicted RBP26.7■■□□□ 1.86
PABPN1-207ENST00000556821 CTNNA3Q9UI47 895 aa26.7■■□□□ 1.86
PABPN1-207ENST00000556821 ATP2A1O14983 1001 aa26.69■■□□□ 1.86
PABPN1-207ENST00000556821 TOP1P11387 765 aaKnown RBP26.69■■□□□ 1.86
PABPN1-207ENST00000556821 KCTD1Q719H9 257 aa26.69■■□□□ 1.86
PABPN1-207ENST00000556821 ESR2Q92731 530 aa26.69■■□□□ 1.86
PABPN1-207ENST00000556821 TEX13BQ9BXU2 312 aa26.69■■□□□ 1.86
PABPN1-207ENST00000556821 RIPK3Q9Y572 518 aa26.69■■□□□ 1.86
PABPN1-207ENST00000556821 B4E1Z4 1266 aa26.68■■□□□ 1.86
PABPN1-207ENST00000556821 KDM4AO75164 1064 aa26.68■■□□□ 1.86
PABPN1-207ENST00000556821 STAT2P52630 851 aa26.68■■□□□ 1.86
PABPN1-207ENST00000556821 SNRNP48Q6IEG0 339 aaKnown RBP26.68■■□□□ 1.86
PABPN1-207ENST00000556821 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.68■■□□□ 1.86
PABPN1-207ENST00000556821 ZKSCAN3Q9BRR0 538 aa26.68■■□□□ 1.86
PABPN1-207ENST00000556821 FCER1AP12319 257 aa26.67■■□□□ 1.86
PABPN1-207ENST00000556821 CCND3P30281 292 aaPredicted RBP26.67■■□□□ 1.86
PABPN1-207ENST00000556821 DPP9Q86TI2 863 aa26.67■■□□□ 1.86
PABPN1-207ENST00000556821 CPXCR1Q8N123 301 aa26.67■■□□□ 1.86
PABPN1-207ENST00000556821 RAVER2Q9HCJ3 691 aaKnown RBP26.67■■□□□ 1.86
PABPN1-207ENST00000556821 ISY1Q9ULR0 285 aaKnown RBP26.67■■□□□ 1.86
PABPN1-207ENST00000556821 MTMR7Q9Y216 660 aa26.67■■□□□ 1.86
PABPN1-207ENST00000556821 LRRC37A2A6NM11 1700 aa26.66■■□□□ 1.86
PABPN1-207ENST00000556821 PLA2G6O60733 806 aa26.66■■□□□ 1.86
PABPN1-207ENST00000556821 COPB2P35606 906 aa26.66■■□□□ 1.86
PABPN1-207ENST00000556821 FAM160B2Q86V87 743 aa26.66■■□□□ 1.86
PABPN1-207ENST00000556821 DCAF4Q8WV16 495 aa26.66■■□□□ 1.86
PABPN1-207ENST00000556821 TTC14Q96N46 770 aa26.66■■□□□ 1.86
PABPN1-207ENST00000556821 POTEB2H3BUK9 544 aa26.65■■□□□ 1.86
PABPN1-207ENST00000556821 ZBED4O75132 1171 aa26.65■■□□□ 1.86
PABPN1-207ENST00000556821 SYN1P17600 705 aa26.65■■□□□ 1.86
PABPN1-207ENST00000556821 NT5C2P49902 561 aa26.65■■□□□ 1.86
PABPN1-207ENST00000556821 CHURC1Q8WUH1 139 aa26.65■■□□□ 1.86
PABPN1-207ENST00000556821 MMP19Q99542 508 aa26.65■■□□□ 1.86
PABPN1-207ENST00000556821 ZNF536O15090 1300 aa26.65■■□□□ 1.86
PABPN1-207ENST00000556821 CYP21A2P08686 494 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms