RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 C16orf59Q7L2K0 433 aa16.82■□□□□ 0.28
ACTN1-219ENST00000556432 SIAH1Q8IUQ4 282 aa16.82■□□□□ 0.28
ACTN1-219ENST00000556432 LCORLQ8N3X6 602 aa16.82■□□□□ 0.28
ACTN1-219ENST00000556432 DDX11Q96FC9 970 aa16.82■□□□□ 0.28
ACTN1-219ENST00000556432 NKX2-4Q9H2Z4 354 aa16.82■□□□□ 0.28
ACTN1-219ENST00000556432 SLC28A3Q9HAS3 691 aa16.82■□□□□ 0.28
ACTN1-219ENST00000556432 GOPCQ9HD26 462 aa16.82■□□□□ 0.28
ACTN1-219ENST00000556432 NOP58Q9Y2X3 529 aaKnown RBP16.82■□□□□ 0.28
ACTN1-219ENST00000556432 COL11A1P12107 1806 aaPredicted RBP16.82■□□□□ 0.28
ACTN1-219ENST00000556432 ELP1O95163 1332 aa16.81■□□□□ 0.28
ACTN1-219ENST00000556432 MYH8P13535 1937 aa16.81■□□□□ 0.28
ACTN1-219ENST00000556432 A0A0U1RQG5 324 aaPredicted RBP16.81■□□□□ 0.28
ACTN1-219ENST00000556432 TLR3O15455 904 aaKnown RBP16.81■□□□□ 0.28
ACTN1-219ENST00000556432 FAM83BQ5T0W9 1011 aa16.81■□□□□ 0.28
ACTN1-219ENST00000556432 AMOTL1Q8IY63 956 aa16.81■□□□□ 0.28
ACTN1-219ENST00000556432 PCSK9Q8NBP7 692 aaKnown RBP16.81■□□□□ 0.28
ACTN1-219ENST00000556432 KLHDC9Q8NEP7 349 aa16.81■□□□□ 0.28
ACTN1-219ENST00000556432 NECAB3Q96P71 396 aaPredicted RBP16.81■□□□□ 0.28
ACTN1-219ENST00000556432 DNAJC2Q99543 621 aaKnown RBP16.81■□□□□ 0.28
ACTN1-219ENST00000556432 BCL11AQ9H165 835 aa16.81■□□□□ 0.28
ACTN1-219ENST00000556432 PPP1R9AQ9ULJ8 1098 aa16.81■□□□□ 0.28
ACTN1-219ENST00000556432 SYNGAP1Q96PV0 1343 aa16.8■□□□□ 0.28
ACTN1-219ENST00000556432 DUSP11O75319 330 aaKnown RBP16.8■□□□□ 0.28
ACTN1-219ENST00000556432 ASGR1P07306 291 aa16.8■□□□□ 0.28
ACTN1-219ENST00000556432 EEF2P13639 858 aaKnown RBP16.8■□□□□ 0.28
ACTN1-219ENST00000556432 SKIV2LQ15477 1246 aaKnown RBP16.8■□□□□ 0.28
ACTN1-219ENST00000556432 RASIP1Q5U651 963 aa16.8■□□□□ 0.28
ACTN1-219ENST00000556432 SNRNP48Q6IEG0 339 aaKnown RBP16.8■□□□□ 0.28
ACTN1-219ENST00000556432 MSL3Q8N5Y2 521 aaKnown RBP16.8■□□□□ 0.28
ACTN1-219ENST00000556432 CCDC17Q96LX7 622 aa16.8■□□□□ 0.28
ACTN1-219ENST00000556432 ARMT1Q9H993 441 aa16.8■□□□□ 0.28
ACTN1-219ENST00000556432 ZNF214Q9UL59 606 aaPredicted RBP16.8■□□□□ 0.28
ACTN1-219ENST00000556432 ADAMTS5Q9UNA0 930 aa16.8■□□□□ 0.28
ACTN1-219ENST00000556432 CTDP1Q9Y5B0 961 aaPredicted RBP16.8■□□□□ 0.28
ACTN1-219ENST00000556432 CHD9Q3L8U1 2897 aa16.79■□□□□ 0.28
ACTN1-219ENST00000556432 ARVCFO00192 962 aa16.79■□□□□ 0.28
ACTN1-219ENST00000556432 GOLIM4O00461 696 aa16.79■□□□□ 0.28
ACTN1-219ENST00000556432 SNAI1O95863 264 aaPredicted RBP16.79■□□□□ 0.28
ACTN1-219ENST00000556432 CYP2C18P33260 490 aa16.79■□□□□ 0.28
ACTN1-219ENST00000556432 IRX5P78411 483 aaPredicted RBP16.79■□□□□ 0.28
ACTN1-219ENST00000556432 GNASQ5JWF2 1037 aa16.79■□□□□ 0.28
ACTN1-219ENST00000556432 CCSAPQ6IQ19 270 aaPredicted RBP16.79■□□□□ 0.28
ACTN1-219ENST00000556432 FTSJ3Q8IY81 847 aaKnown RBP16.79■□□□□ 0.28
ACTN1-219ENST00000556432 C1QTNF1Q9BXJ1 281 aa16.79■□□□□ 0.28
ACTN1-219ENST00000556432 TEX13BQ9BXU2 312 aa16.79■□□□□ 0.28
ACTN1-219ENST00000556432 IL23AQ9NPF7 189 aa16.79■□□□□ 0.28
ACTN1-219ENST00000556432 PARP14Q460N5 1801 aa16.79■□□□□ 0.28
ACTN1-219ENST00000556432 CYP2D7A0A087X1C5 515 aa16.78■□□□□ 0.28
ACTN1-219ENST00000556432 CST5P28325 142 aaPredicted RBP16.78■□□□□ 0.28
ACTN1-219ENST00000556432 CDK8P49336 464 aa16.78■□□□□ 0.28
ACTN1-219ENST00000556432 CDK7P50613 346 aa16.78■□□□□ 0.28
ACTN1-219ENST00000556432 ZKSCAN2Q63HK3 967 aa16.78■□□□□ 0.28
ACTN1-219ENST00000556432 ERC1Q8IUD2 1116 aa16.78■□□□□ 0.28
ACTN1-219ENST00000556432 ITPRIPQ8IWB1 547 aa16.78■□□□□ 0.28
ACTN1-219ENST00000556432 DDRGK1Q96HY6 314 aa16.78■□□□□ 0.28
ACTN1-219ENST00000556432 SLF1Q9BQI6 1058 aa16.78■□□□□ 0.28
ACTN1-219ENST00000556432 KANSL2Q9H9L4 492 aa16.78■□□□□ 0.28
ACTN1-219ENST00000556432 CXXC1Q9P0U4 656 aaPredicted RBP16.78■□□□□ 0.28
ACTN1-219ENST00000556432 EXOC6BQ9Y2D4 811 aa16.78■□□□□ 0.28
ACTN1-219ENST00000556432 PRKAB2O43741 272 aa16.77■□□□□ 0.28
ACTN1-219ENST00000556432 MBD4O95243 580 aa16.77■□□□□ 0.28
ACTN1-219ENST00000556432 FGBP02675 491 aa16.77■□□□□ 0.28
ACTN1-219ENST00000556432 ACVR2BQ13705 512 aa16.77■□□□□ 0.28
ACTN1-219ENST00000556432 CCDC144BQ3MJ40 725 aa16.77■□□□□ 0.28
ACTN1-219ENST00000556432 PPP2R2DQ66LE6 453 aa16.77■□□□□ 0.28
ACTN1-219ENST00000556432 NOL8Q76FK4 1167 aaKnown RBP16.77■□□□□ 0.28
ACTN1-219ENST00000556432 OTOP2Q7RTS6 562 aa16.77■□□□□ 0.28
ACTN1-219ENST00000556432 FAM126BQ8IXS8 530 aa16.77■□□□□ 0.28
ACTN1-219ENST00000556432 HERVK_113Q902F9 699 aa16.77■□□□□ 0.28
ACTN1-219ENST00000556432 NUP88Q99567 741 aaPredicted RBP16.77■□□□□ 0.28
ACTN1-219ENST00000556432 HIPK3Q9H422 1215 aa16.77■□□□□ 0.28
ACTN1-219ENST00000556432 IL1RAPL2Q9NP60 686 aa16.77■□□□□ 0.28
ACTN1-219ENST00000556432 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.77■□□□□ 0.28
ACTN1-219ENST00000556432 YBX2Q9Y2T7 364 aaKnown RBP16.77■□□□□ 0.28
ACTN1-219ENST00000556432 TFF2Q03403 129 aa16.76■□□□□ 0.27
ACTN1-219ENST00000556432 AAK1Q2M2I8 961 aa16.76■□□□□ 0.27
ACTN1-219ENST00000556432 MAMDC4Q6UXC1 1216 aa16.76■□□□□ 0.27
ACTN1-219ENST00000556432 CPXCR1Q8N123 301 aa16.76■□□□□ 0.27
ACTN1-219ENST00000556432 REPS2Q8NFH8 660 aa16.76■□□□□ 0.27
ACTN1-219ENST00000556432 ATP8A2Q9NTI2 1148 aa16.76■□□□□ 0.27
ACTN1-219ENST00000556432 TCRBV5S4A2TA0A5A2 114 aa16.75■□□□□ 0.27
ACTN1-219ENST00000556432 USP17L12C9JPN9 530 aa16.75■□□□□ 0.27
ACTN1-219ENST00000556432 USP17L21D6R901 530 aa16.75■□□□□ 0.27
ACTN1-219ENST00000556432 SMIM22K7EJ46 135 aa16.75■□□□□ 0.27
ACTN1-219ENST00000556432 ADCY6O43306 1168 aa16.75■□□□□ 0.27
ACTN1-219ENST00000556432 RABGGTBP53611 331 aa16.75■□□□□ 0.27
ACTN1-219ENST00000556432 C12orf60Q5U649 245 aa16.75■□□□□ 0.27
ACTN1-219ENST00000556432 C16orf86Q6ZW13 317 aa16.75■□□□□ 0.27
ACTN1-219ENST00000556432 ANKRD35Q8N283 1001 aa16.75■□□□□ 0.27
ACTN1-219ENST00000556432 UPF3AQ9H1J1 476 aaKnown RBP16.75■□□□□ 0.27
ACTN1-219ENST00000556432 ABHD16BQ9H3Z7 469 aa16.75■□□□□ 0.27
ACTN1-219ENST00000556432 HCN4Q9Y3Q4 1203 aa16.75■□□□□ 0.27
ACTN1-219ENST00000556432 RIPK3Q9Y572 518 aa16.75■□□□□ 0.27
ACTN1-219ENST00000556432 TCF20Q9UGU0 1960 aaKnown RBP16.75■□□□□ 0.27
ACTN1-219ENST00000556432 ZBBXA8MT70 800 aa16.74■□□□□ 0.27
ACTN1-219ENST00000556432 ZBED4O75132 1171 aa16.74■□□□□ 0.27
ACTN1-219ENST00000556432 CCL23P55773 120 aa16.74■□□□□ 0.27
ACTN1-219ENST00000556432 GJA9P57773 515 aa16.74■□□□□ 0.27
ACTN1-219ENST00000556432 BEX3Q00994 111 aa16.74■□□□□ 0.27
ACTN1-219ENST00000556432 ARMCX2Q7L311 632 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms