RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 KIF5BP33176 963 aa16.5■□□□□ 0.23
SNX6-206ENST00000556162 SLC16A2P36021 539 aa16.5■□□□□ 0.23
SNX6-206ENST00000556162 APOBRQ0VD83 1088 aa16.5■□□□□ 0.23
SNX6-206ENST00000556162 GRM4Q14833 912 aa16.5■□□□□ 0.23
SNX6-206ENST00000556162 APOA5Q6Q788 366 aa16.5■□□□□ 0.23
SNX6-206ENST00000556162 BTNL9Q6UXG8 535 aa16.5■□□□□ 0.23
SNX6-206ENST00000556162 GPRC5AQ8NFJ5 357 aa16.5■□□□□ 0.23
SNX6-206ENST00000556162 BRPF3Q9ULD4 1205 aa16.5■□□□□ 0.23
SNX6-206ENST00000556162 ADAMTS5Q9UNA0 930 aa16.5■□□□□ 0.23
SNX6-206ENST00000556162 PALM3A6NDB9 673 aaPredicted RBP16.5■□□□□ 0.23
SNX6-206ENST00000556162 VWA5AO00534 786 aa16.5■□□□□ 0.23
SNX6-206ENST00000556162 ZBTB43O43298 467 aa16.5■□□□□ 0.23
SNX6-206ENST00000556162 ZBED4O75132 1171 aa16.5■□□□□ 0.23
SNX6-206ENST00000556162 FDX1P10109 184 aa16.5■□□□□ 0.23
SNX6-206ENST00000556162 SP3Q02447 781 aa16.5■□□□□ 0.23
SNX6-206ENST00000556162 FAM110CQ1W6H9 321 aa16.5■□□□□ 0.23
SNX6-206ENST00000556162 MICU3Q86XE3 530 aa16.5■□□□□ 0.23
SNX6-206ENST00000556162 KIF2CQ99661 725 aa16.5■□□□□ 0.23
SNX6-206ENST00000556162 ALDH8A1Q9H2A2 487 aaPredicted RBP16.5■□□□□ 0.23
SNX6-206ENST00000556162 MORF4L1Q9UBU8 362 aa16.5■□□□□ 0.23
SNX6-206ENST00000556162 MAD2L2Q9UI95 211 aa16.5■□□□□ 0.23
SNX6-206ENST00000556162 PRR12Q9ULL5 1215 aa16.5■□□□□ 0.23
SNX6-206ENST00000556162 KLRF2D3W0D1 207 aa16.49■□□□□ 0.23
SNX6-206ENST00000556162 RXRAP19793 462 aa16.49■□□□□ 0.23
SNX6-206ENST00000556162 TOB2Q14106 344 aaPredicted RBP16.49■□□□□ 0.23
SNX6-206ENST00000556162 ANKRD1Q15327 319 aa16.49■□□□□ 0.23
SNX6-206ENST00000556162 SYDE2Q5VT97 1194 aa16.49■□□□□ 0.23
SNX6-206ENST00000556162 POTEEQ6S8J3 1075 aa16.49■□□□□ 0.23
SNX6-206ENST00000556162 STAG2Q8N3U4 1231 aa16.49■□□□□ 0.23
SNX6-206ENST00000556162 FANCBQ8NB91 859 aa16.49■□□□□ 0.23
SNX6-206ENST00000556162 UBA5Q9GZZ9 404 aa16.49■□□□□ 0.23
SNX6-206ENST00000556162 TXNRD2Q9NNW7 524 aa16.49■□□□□ 0.23
SNX6-206ENST00000556162 FKTNO75072 461 aa16.48■□□□□ 0.23
SNX6-206ENST00000556162 HSPA8P11142 646 aaKnown RBP16.48■□□□□ 0.23
SNX6-206ENST00000556162 ERVK-9P63128 1117 aa16.48■□□□□ 0.23
SNX6-206ENST00000556162 ERVK-24P63145 666 aa16.48■□□□□ 0.23
SNX6-206ENST00000556162 RAB11FIP4Q86YS3 637 aa16.48■□□□□ 0.23
SNX6-206ENST00000556162 CCDC144CPQ8IYA2 1237 aa16.48■□□□□ 0.23
SNX6-206ENST00000556162 ZNF296Q8WUU4 475 aaPredicted RBP16.48■□□□□ 0.23
SNX6-206ENST00000556162 SLC38A10Q9HBR0 1119 aa16.48■□□□□ 0.23
SNX6-206ENST00000556162 BTBD7Q9P203 1132 aa16.48■□□□□ 0.23
SNX6-206ENST00000556162 DHX16O60231 1041 aaKnown RBP16.48■□□□□ 0.23
SNX6-206ENST00000556162 PEX10O60683 326 aa16.48■□□□□ 0.23
SNX6-206ENST00000556162 CNMDO75829 334 aa16.48■□□□□ 0.23
SNX6-206ENST00000556162 GNAQP50148 359 aa16.48■□□□□ 0.23
SNX6-206ENST00000556162 RCAN1P53805 252 aa16.48■□□□□ 0.23
SNX6-206ENST00000556162 EVCP57679 992 aa16.48■□□□□ 0.23
SNX6-206ENST00000556162 PLS1Q14651 629 aa16.48■□□□□ 0.23
SNX6-206ENST00000556162 Q3C1V9 767 aa16.48■□□□□ 0.23
SNX6-206ENST00000556162 GOLGA8BA8MQT2 603 aa16.47■□□□□ 0.23
SNX6-206ENST00000556162 LBX1P52954 281 aa16.47■□□□□ 0.23
SNX6-206ENST00000556162 CCNA1P78396 465 aa16.47■□□□□ 0.23
SNX6-206ENST00000556162 KIF22Q14807 665 aa16.47■□□□□ 0.23
SNX6-206ENST00000556162 TMEM132BQ14DG7 1078 aa16.47■□□□□ 0.23
SNX6-206ENST00000556162 RABEP1Q15276 862 aa16.47■□□□□ 0.23
SNX6-206ENST00000556162 CCAR1Q8IX12 1150 aaKnown RBP16.47■□□□□ 0.23
SNX6-206ENST00000556162 LZTS2Q9BRK4 669 aa16.47■□□□□ 0.23
SNX6-206ENST00000556162 CPVLQ9H3G5 476 aa16.47■□□□□ 0.23
SNX6-206ENST00000556162 VAT1LQ9HCJ6 419 aa16.47■□□□□ 0.23
SNX6-206ENST00000556162 GOLGA8AA7E2F4 631 aa16.46■□□□□ 0.23
SNX6-206ENST00000556162 METAP2P50579 478 aaKnown RBP eCLIP16.46■□□□□ 0.23
SNX6-206ENST00000556162 AK2P54819 239 aa16.46■□□□□ 0.23
SNX6-206ENST00000556162 PPP2R5BQ15173 497 aa16.46■□□□□ 0.23
SNX6-206ENST00000556162 ADGRF4Q8IZF3 695 aa16.46■□□□□ 0.23
SNX6-206ENST00000556162 CPXCR1Q8N123 301 aa16.46■□□□□ 0.23
SNX6-206ENST00000556162 ZNF274Q96GC6 653 aaPredicted RBP16.46■□□□□ 0.23
SNX6-206ENST00000556162 LARP6Q9BRS8 491 aaKnown RBP16.46■□□□□ 0.23
SNX6-206ENST00000556162 SPATC1LQ9H0A9 340 aa16.46■□□□□ 0.23
SNX6-206ENST00000556162 RBM28Q9NW13 759 aaKnown RBP16.46■□□□□ 0.23
SNX6-206ENST00000556162 RLFQ13129 1914 aa16.46■□□□□ 0.23
SNX6-206ENST00000556162 PDIA3P30101 505 aaKnown RBP16.46■□□□□ 0.22
SNX6-206ENST00000556162 STAT3P40763 770 aa16.46■□□□□ 0.22
SNX6-206ENST00000556162 OAZ1P54368 228 aa16.46■□□□□ 0.22
SNX6-206ENST00000556162 LACTBP83111 547 aaPredicted RBP16.46■□□□□ 0.22
SNX6-206ENST00000556162 RTN1Q16799 776 aa16.46■□□□□ 0.22
SNX6-206ENST00000556162 IL27Q8NEV9 243 aa16.46■□□□□ 0.22
SNX6-206ENST00000556162 REPS2Q8NFH8 660 aa16.46■□□□□ 0.22
SNX6-206ENST00000556162 ERO1AQ96HE7 468 aa16.46■□□□□ 0.22
SNX6-206ENST00000556162 RANBP17Q9H2T7 1088 aaKnown RBP16.46■□□□□ 0.22
SNX6-206ENST00000556162 CCDC196A0A1B0GTZ2 297 aa16.45■□□□□ 0.22
SNX6-206ENST00000556162 ATP2A1O14983 1001 aa16.45■□□□□ 0.22
SNX6-206ENST00000556162 SMARCA1P28370 1054 aa16.45■□□□□ 0.22
SNX6-206ENST00000556162 SNAP25P60880 206 aa16.45■□□□□ 0.22
SNX6-206ENST00000556162 ARHGEF6Q15052 776 aa16.45■□□□□ 0.22
SNX6-206ENST00000556162 CCDC174Q6PII3 467 aa16.45■□□□□ 0.22
SNX6-206ENST00000556162 TEX13BQ9BXU2 312 aa16.45■□□□□ 0.22
SNX6-206ENST00000556162 JMJD4Q9H9V9 463 aa16.45■□□□□ 0.22
SNX6-206ENST00000556162 RAVER2Q9HCJ3 691 aaKnown RBP16.45■□□□□ 0.22
SNX6-206ENST00000556162 ZNF214Q9UL59 606 aaPredicted RBP16.45■□□□□ 0.22
SNX6-206ENST00000556162 ECM2O94769 699 aaPredicted RBP16.44■□□□□ 0.22
SNX6-206ENST00000556162 SLC4A3P48751 1232 aa16.44■□□□□ 0.22
SNX6-206ENST00000556162 MOV10L1Q9BXT6 1211 aaKnown RBP16.44■□□□□ 0.22
SNX6-206ENST00000556162 RIOX1Q9H6W3 641 aa16.44■□□□□ 0.22
SNX6-206ENST00000556162 HPS5Q9UPZ3 1129 aa16.44■□□□□ 0.22
SNX6-206ENST00000556162 ST18O60284 1047 aa16.44■□□□□ 0.22
SNX6-206ENST00000556162 PLEKHA8P1O95397 391 aa16.44■□□□□ 0.22
SNX6-206ENST00000556162 FMNL1O95466 1100 aaPredicted RBP16.44■□□□□ 0.22
SNX6-206ENST00000556162 SLC25A27O95847 323 aa16.44■□□□□ 0.22
SNX6-206ENST00000556162 PSMC4P43686 418 aa16.44■□□□□ 0.22
SNX6-206ENST00000556162 SNRNP48Q6IEG0 339 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms