RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-223	ENST00000556142	CMA1	P23946	247 aa		10.9	□□□□□ -0.67
HNRNPC-223	ENST00000556142	ME1	P48163	572 aa		10.9	□□□□□ -0.67
HNRNPC-223	ENST00000556142	MAP3K10	Q02779	954 aa		10.9	□□□□□ -0.67
HNRNPC-223	ENST00000556142	GNL2	Q13823	731 aa	Known RBP	10.9	□□□□□ -0.67
HNRNPC-223	ENST00000556142	ASPRV1	Q53RT3	343 aa		10.9	□□□□□ -0.67
HNRNPC-223	ENST00000556142	NOM1	Q5C9Z4	860 aa	Known RBP	10.9	□□□□□ -0.67
HNRNPC-223	ENST00000556142	WWC2	Q6AWC2	1192 aa		10.9	□□□□□ -0.67
HNRNPC-223	ENST00000556142	FMR1NB	Q8N0W7	255 aa	Predicted RBP	10.9	□□□□□ -0.67
HNRNPC-223	ENST00000556142	FAM177A1	Q8N128	213 aa	Predicted RBP	10.9	□□□□□ -0.67
HNRNPC-223	ENST00000556142	LRRC47	Q8N1G4	583 aa	Known RBP	10.9	□□□□□ -0.67
HNRNPC-223	ENST00000556142	OGFOD1	Q8N543	542 aa		10.9	□□□□□ -0.67
HNRNPC-223	ENST00000556142	DAGLB	Q8NCG7	672 aa		10.9	□□□□□ -0.67
HNRNPC-223	ENST00000556142	PANK2	Q9BZ23	570 aa		10.9	□□□□□ -0.67
HNRNPC-223	ENST00000556142	NUP62CL	Q9H1M0	184 aa		10.9	□□□□□ -0.67
HNRNPC-223	ENST00000556142	CPVL	Q9H3G5	476 aa		10.9	□□□□□ -0.67
HNRNPC-223	ENST00000556142	TSPY26P	Q9H489	355 aa		10.9	□□□□□ -0.67
HNRNPC-223	ENST00000556142	CABP5	Q9NP86	173 aa		10.9	□□□□□ -0.67
HNRNPC-223	ENST00000556142	PCDHB6	Q9Y5E3	794 aa		10.9	□□□□□ -0.67
HNRNPC-223	ENST00000556142	WNT10B	O00744	389 aa		10.89	□□□□□ -0.67
HNRNPC-223	ENST00000556142	WNT7A	O00755	349 aa		10.89	□□□□□ -0.67
HNRNPC-223	ENST00000556142	TBC1D12	O60347	775 aa		10.89	□□□□□ -0.67
HNRNPC-223	ENST00000556142	EEF2	P13639	858 aa	Known RBP	10.89	□□□□□ -0.67
HNRNPC-223	ENST00000556142	MARCKS	P29966	332 aa	Predicted RBP	10.89	□□□□□ -0.67
HNRNPC-223	ENST00000556142	EIF6	P56537	245 aa	Known RBP	10.89	□□□□□ -0.67
HNRNPC-223	ENST00000556142	NLRP5	P59047	1200 aa		10.89	□□□□□ -0.67
HNRNPC-223	ENST00000556142	ZNF543	Q08ER8	600 aa		10.89	□□□□□ -0.67
HNRNPC-223	ENST00000556142	TNIP1	Q15025	636 aa		10.89	□□□□□ -0.67
HNRNPC-223	ENST00000556142	PPP4R3B	Q5MIZ7	849 aa		10.89	□□□□□ -0.67
HNRNPC-223	ENST00000556142	FAM83A	Q86UY5	434 aa		10.89	□□□□□ -0.67
HNRNPC-223	ENST00000556142	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	10.89	□□□□□ -0.67
HNRNPC-223	ENST00000556142	FSIP1	Q8NA03	581 aa		10.89	□□□□□ -0.67
HNRNPC-223	ENST00000556142	JDP2	Q8WYK2	163 aa		10.89	□□□□□ -0.67
HNRNPC-223	ENST00000556142	MRPS27	Q92552	414 aa	Known RBP	10.89	□□□□□ -0.67
HNRNPC-223	ENST00000556142	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	10.89	□□□□□ -0.67	5e-6	■■□□□ 13.3
HNRNPC-223	ENST00000556142	BEGAIN	Q9BUH8	593 aa		10.89	□□□□□ -0.67
HNRNPC-223	ENST00000556142	UBA5	Q9GZZ9	404 aa		10.89	□□□□□ -0.67
HNRNPC-223	ENST00000556142	KANSL2	Q9H9L4	492 aa		10.89	□□□□□ -0.67
HNRNPC-223	ENST00000556142	BARHL2	Q9NY43	387 aa		10.89	□□□□□ -0.67
HNRNPC-223	ENST00000556142	HACL1	Q9UJ83	578 aa		10.89	□□□□□ -0.67
HNRNPC-223	ENST00000556142	ABT1	Q9ULW3	272 aa	Known RBP	10.89	□□□□□ -0.67
HNRNPC-223	ENST00000556142	HPSE	Q9Y251	543 aa		10.89	□□□□□ -0.67
HNRNPC-223	ENST00000556142	MPHOSPH10	O00566	681 aa	Known RBP	10.88	□□□□□ -0.67
HNRNPC-223	ENST00000556142	CUTA	O60888	179 aa		10.88	□□□□□ -0.67
HNRNPC-223	ENST00000556142	PTPRE	P23469	700 aa		10.88	□□□□□ -0.67
HNRNPC-223	ENST00000556142	RPS12	P25398	132 aa	Known RBP	10.88	□□□□□ -0.67
HNRNPC-223	ENST00000556142	FAM160A1	Q05DH4	1040 aa		10.88	□□□□□ -0.67
HNRNPC-223	ENST00000556142	SEPT2	Q15019	361 aa		10.88	□□□□□ -0.67
HNRNPC-223	ENST00000556142	NBPF9	Q3BBW0	867 aa		10.88	□□□□□ -0.67
HNRNPC-223	ENST00000556142	MAP1S	Q66K74	1059 aa	Predicted RBP	10.88	□□□□□ -0.67
HNRNPC-223	ENST00000556142	SHC4	Q6S5L8	630 aa		10.88	□□□□□ -0.67
HNRNPC-223	ENST00000556142	TMEM179	Q6ZVK1	233 aa		10.88	□□□□□ -0.67
HNRNPC-223	ENST00000556142	PNMA8A	Q86V59	439 aa	Predicted RBP	10.88	□□□□□ -0.67
HNRNPC-223	ENST00000556142	PIBF1	Q8WXW3	757 aa		10.88	□□□□□ -0.67
HNRNPC-223	ENST00000556142	MTMR8	Q96EF0	704 aa		10.88	□□□□□ -0.67
HNRNPC-223	ENST00000556142	MYOZ2	Q9NPC6	264 aa		10.88	□□□□□ -0.67
HNRNPC-223	ENST00000556142	TMOD2	Q9NZR1	351 aa		10.88	□□□□□ -0.67
HNRNPC-223	ENST00000556142	HERC5	Q9UII4	1024 aa	Known RBP	10.88	□□□□□ -0.67
HNRNPC-223	ENST00000556142	FBXO2	Q9UK22	296 aa	Predicted RBP	10.88	□□□□□ -0.67
HNRNPC-223	ENST00000556142	PCDHA4	Q9UN74	947 aa		10.88	□□□□□ -0.67
HNRNPC-223	ENST00000556142	MTMR7	Q9Y216	660 aa		10.88	□□□□□ -0.67
HNRNPC-223	ENST00000556142	FRMPD2	Q68DX3	1309 aa	Predicted RBP	10.87	□□□□□ -0.67
HNRNPC-223	ENST00000556142		A0A1B0GVL5	298 aa		10.87	□□□□□ -0.67
HNRNPC-223	ENST00000556142	CALML3	P27482	149 aa		10.87	□□□□□ -0.67
HNRNPC-223	ENST00000556142	EPHX2	P34913	555 aa		10.87	□□□□□ -0.67
HNRNPC-223	ENST00000556142	NDUFA8	P51970	172 aa		10.87	□□□□□ -0.67
HNRNPC-223	ENST00000556142	CAMK4	Q16566	473 aa		10.87	□□□□□ -0.67
HNRNPC-223	ENST00000556142	MAP3K11	Q16584	847 aa		10.87	□□□□□ -0.67
HNRNPC-223	ENST00000556142	ABCB5	Q2M3G0	1257 aa		10.87	□□□□□ -0.67
HNRNPC-223	ENST00000556142	RESP18	Q5W5W9	173 aa		10.87	□□□□□ -0.67
HNRNPC-223	ENST00000556142	TTBK2	Q6IQ55	1244 aa		10.87	□□□□□ -0.67
HNRNPC-223	ENST00000556142	GALNT17	Q6IS24	598 aa		10.87	□□□□□ -0.67
HNRNPC-223	ENST00000556142	BLID	Q8IZY5	108 aa		10.87	□□□□□ -0.67
HNRNPC-223	ENST00000556142	DPF2	Q92785	391 aa		10.87	□□□□□ -0.67
HNRNPC-223	ENST00000556142	CLIC6	Q96NY7	704 aa		10.87	□□□□□ -0.67
HNRNPC-223	ENST00000556142	PIGS	Q96S52	555 aa		10.87	□□□□□ -0.67
HNRNPC-223	ENST00000556142	CSRNP1	Q96S65	589 aa		10.87	□□□□□ -0.67
HNRNPC-223	ENST00000556142	ZMYND12	Q9H0C1	365 aa		10.87	□□□□□ -0.67
HNRNPC-223	ENST00000556142	TNMD	Q9H2S6	317 aa		10.87	□□□□□ -0.67
HNRNPC-223	ENST00000556142	BRMS1	Q9HCU9	246 aa		10.87	□□□□□ -0.67
HNRNPC-223	ENST00000556142	PCDHA6	Q9UN73	950 aa		10.87	□□□□□ -0.67
HNRNPC-223	ENST00000556142	PCDHA8	Q9Y5H6	950 aa		10.87	□□□□□ -0.67
HNRNPC-223	ENST00000556142	GDF11	O95390	407 aa		10.86	□□□□□ -0.67
HNRNPC-223	ENST00000556142	EGFR	P00533	1210 aa		10.86	□□□□□ -0.67
HNRNPC-223	ENST00000556142	TRAPPC10	P48553	1259 aa		10.86	□□□□□ -0.67
HNRNPC-223	ENST00000556142	GRIN1	Q05586	938 aa		10.86	□□□□□ -0.67
HNRNPC-223	ENST00000556142	RBM26	Q5T8P6	1007 aa	Known RBP	10.86	□□□□□ -0.67
HNRNPC-223	ENST00000556142	CCDC73	Q6ZRK6	1079 aa		10.86	□□□□□ -0.67
HNRNPC-223	ENST00000556142	CDAN1	Q8IWY9	1227 aa		10.86	□□□□□ -0.67
HNRNPC-223	ENST00000556142	DCAF4	Q8WV16	495 aa		10.86	□□□□□ -0.67
HNRNPC-223	ENST00000556142	RRP36	Q96EU6	259 aa	Known RBP	10.86	□□□□□ -0.67
HNRNPC-223	ENST00000556142	JMJD4	Q9H9V9	463 aa		10.86	□□□□□ -0.67
HNRNPC-223	ENST00000556142	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	10.86	□□□□□ -0.67
HNRNPC-223	ENST00000556142	SRPRB	Q9Y5M8	271 aa	Known RBP	10.86	□□□□□ -0.67
HNRNPC-223	ENST00000556142	MYH6	P13533	1939 aa		10.86	□□□□□ -0.67
HNRNPC-223	ENST00000556142	ZNF541	Q9H0D2	1346 aa		10.86	□□□□□ -0.67
HNRNPC-223	ENST00000556142	HAX1	O00165	279 aa		10.86	□□□□□ -0.67
HNRNPC-223	ENST00000556142	CTAGE5	O15320	804 aa		10.86	□□□□□ -0.67
HNRNPC-223	ENST00000556142	GH2	P01242	217 aa		10.86	□□□□□ -0.67
HNRNPC-223	ENST00000556142	PFKFB1	P16118	471 aa		10.86	□□□□□ -0.67
HNRNPC-223	ENST00000556142	ECE1	P42892	770 aa		10.86	□□□□□ -0.67

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