RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 FSD1Q9BTV5 496 aa22.43■■□□□ 1.18
CDKN3-209ENST00000556102 ZBED4O75132 1171 aa22.42■■□□□ 1.18
CDKN3-209ENST00000556102 TTLL1O95922 423 aa22.42■■□□□ 1.18
CDKN3-209ENST00000556102 ZNF865P0CJ78 1059 aaPredicted RBP22.42■■□□□ 1.18
CDKN3-209ENST00000556102 AKR1A1P14550 325 aa22.42■■□□□ 1.18
CDKN3-209ENST00000556102 TAL1P17542 331 aaPredicted RBP22.42■■□□□ 1.18
CDKN3-209ENST00000556102 PDE4BQ07343 736 aa22.42■■□□□ 1.18
CDKN3-209ENST00000556102 TRIM60Q495X7 471 aa22.42■■□□□ 1.18
CDKN3-209ENST00000556102 ZMYM1Q5SVZ6 1142 aa22.42■■□□□ 1.18
CDKN3-209ENST00000556102 C1orf53Q5VUE5 145 aa22.42■■□□□ 1.18
CDKN3-209ENST00000556102 Q7L0L9 218 aa22.42■■□□□ 1.18
CDKN3-209ENST00000556102 MSL3Q8N5Y2 521 aaKnown RBP22.42■■□□□ 1.18
CDKN3-209ENST00000556102 FEM1BQ9UK73 627 aa22.42■■□□□ 1.18
CDKN3-209ENST00000556102 PHF24Q9UPV7 400 aa22.42■■□□□ 1.18
CDKN3-209ENST00000556102 CNPY2Q9Y2B0 182 aa22.42■■□□□ 1.18
CDKN3-209ENST00000556102 RIPK3Q9Y572 518 aa22.42■■□□□ 1.18
CDKN3-209ENST00000556102 CTDP1Q9Y5B0 961 aaPredicted RBP22.42■■□□□ 1.18
CDKN3-209ENST00000556102 MX1P20591 662 aa22.41■■□□□ 1.18
CDKN3-209ENST00000556102 RNF180Q86T96 592 aa22.41■■□□□ 1.18
CDKN3-209ENST00000556102 CPXCR1Q8N123 301 aa22.41■■□□□ 1.18
CDKN3-209ENST00000556102 GMCL1P1Q8NEA9 526 aa22.41■■□□□ 1.18
CDKN3-209ENST00000556102 NEDD1Q8NHV4 660 aa22.41■■□□□ 1.18
CDKN3-209ENST00000556102 KIFC2Q96AC6 838 aa22.41■■□□□ 1.18
CDKN3-209ENST00000556102 DDX11Q96FC9 970 aa22.41■■□□□ 1.18
CDKN3-209ENST00000556102 NAPBQ9H115 298 aa22.41■■□□□ 1.18
CDKN3-209ENST00000556102 SLC38A10Q9HBR0 1119 aa22.41■■□□□ 1.18
CDKN3-209ENST00000556102 PRDM5Q9NQX1 630 aaPredicted RBP22.41■■□□□ 1.18
CDKN3-209ENST00000556102 SYNGAP1Q96PV0 1343 aa22.4■■□□□ 1.18
CDKN3-209ENST00000556102 DNAJC25-GNG10A0A024R161 153 aa22.4■■□□□ 1.18
CDKN3-209ENST00000556102 PGK1P00558 417 aa22.4■■□□□ 1.18
CDKN3-209ENST00000556102 SLC3A2P08195 630 aaKnown RBP22.4■■□□□ 1.18
CDKN3-209ENST00000556102 TSPY3P0CV98 308 aa22.4■■□□□ 1.18
CDKN3-209ENST00000556102 TSPY8P0CW00 308 aa22.4■■□□□ 1.18
CDKN3-209ENST00000556102 PPARAQ07869 468 aa22.4■■□□□ 1.18
CDKN3-209ENST00000556102 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.4■■□□□ 1.18
CDKN3-209ENST00000556102 LRRC47Q8N1G4 583 aaKnown RBP22.4■■□□□ 1.18
CDKN3-209ENST00000556102 SLC17A8Q8NDX2 589 aa22.4■■□□□ 1.18
CDKN3-209ENST00000556102 PDLIM7Q9NR12 457 aa22.4■■□□□ 1.18
CDKN3-209ENST00000556102 MTMR10Q9NXD2 777 aa22.4■■□□□ 1.18
CDKN3-209ENST00000556102 MCM3APO60318 1980 aa22.39■■□□□ 1.18
CDKN3-209ENST00000556102 MAMDC4Q6UXC1 1216 aa22.39■■□□□ 1.17
CDKN3-209ENST00000556102 RAVER2Q9HCJ3 691 aaKnown RBP22.39■■□□□ 1.17
CDKN3-209ENST00000556102 SALL3Q9BXA9 1300 aa22.38■■□□□ 1.17
CDKN3-209ENST00000556102 SLC4A3P48751 1232 aa22.38■■□□□ 1.17
CDKN3-209ENST00000556102 OAZ1P54368 228 aa22.38■■□□□ 1.17
CDKN3-209ENST00000556102 TFAP4Q01664 338 aa22.38■■□□□ 1.17
CDKN3-209ENST00000556102 SLFN13Q68D06 897 aa22.38■■□□□ 1.17
CDKN3-209ENST00000556102 ZNF467Q7Z7K2 595 aaPredicted RBP22.38■■□□□ 1.17
CDKN3-209ENST00000556102 LENG1Q96BZ8 264 aaPredicted RBP22.38■■□□□ 1.17
CDKN3-209ENST00000556102 FBXO40Q9UH90 709 aa22.38■■□□□ 1.17
CDKN3-209ENST00000556102 STXBP5LQ9Y2K9 1186 aa22.38■■□□□ 1.17
CDKN3-209ENST00000556102 LAMA2P24043 3122 aaKnown RBP22.37■■□□□ 1.17
CDKN3-209ENST00000556102 ADAMTS4O75173 837 aa22.37■■□□□ 1.17
CDKN3-209ENST00000556102 SNAI1O95863 264 aaPredicted RBP22.37■■□□□ 1.17
CDKN3-209ENST00000556102 FDX1P10109 184 aa22.37■■□□□ 1.17
CDKN3-209ENST00000556102 BMP3P12645 472 aa22.37■■□□□ 1.17
CDKN3-209ENST00000556102 RRP1P56182 461 aaKnown RBP22.37■■□□□ 1.17
CDKN3-209ENST00000556102 TLE2Q04725 743 aa22.37■■□□□ 1.17
CDKN3-209ENST00000556102 CHST13Q8NET6 341 aa22.37■■□□□ 1.17
CDKN3-209ENST00000556102 FAM184BQ9ULE4 1060 aa22.37■■□□□ 1.17
CDKN3-209ENST00000556102 A0A1W2PQ45 241 aaPredicted RBP22.36■■□□□ 1.17
CDKN3-209ENST00000556102 A0A1W2PQY0 241 aa22.36■■□□□ 1.17
CDKN3-209ENST00000556102 FAM109BQ6ICB4 259 aaPredicted RBP22.36■■□□□ 1.17
CDKN3-209ENST00000556102 SH3RF1Q7Z6J0 888 aa22.36■■□□□ 1.17
CDKN3-209ENST00000556102 ANKRD35Q8N283 1001 aa22.36■■□□□ 1.17
CDKN3-209ENST00000556102 BADQ92934 168 aa22.36■■□□□ 1.17
CDKN3-209ENST00000556102 TSEN34Q9BSV6 310 aaKnown RBP22.36■■□□□ 1.17
CDKN3-209ENST00000556102 ZHX1Q9UKY1 873 aaPredicted RBP22.36■■□□□ 1.17
CDKN3-209ENST00000556102 SYNRGQ9UMZ2 1314 aa22.35■■□□□ 1.17
CDKN3-209ENST00000556102 TRIM43BA6NCK2 446 aa22.35■■□□□ 1.17
CDKN3-209ENST00000556102 POTEB2H3BUK9 544 aa22.35■■□□□ 1.17
CDKN3-209ENST00000556102 FOXP2O15409 715 aa22.35■■□□□ 1.17
CDKN3-209ENST00000556102 PPP4R3BQ5MIZ7 849 aa22.35■■□□□ 1.17
CDKN3-209ENST00000556102 TRIM43Q96BQ3 446 aaPredicted RBP22.35■■□□□ 1.17
CDKN3-209ENST00000556102 GMCL1Q96IK5 515 aa22.35■■□□□ 1.17
CDKN3-209ENST00000556102 ZBTB47Q9UFB7 747 aaPredicted RBP22.35■■□□□ 1.17
CDKN3-209ENST00000556102 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.35■■□□□ 1.17
CDKN3-209ENST00000556102 TACC3Q9Y6A5 838 aa22.35■■□□□ 1.17
CDKN3-209ENST00000556102 TMEM232C9JQI7 657 aa22.34■■□□□ 1.17
CDKN3-209ENST00000556102 STAT2P52630 851 aa22.34■■□□□ 1.17
CDKN3-209ENST00000556102 SHHQ15465 462 aa22.34■■□□□ 1.17
CDKN3-209ENST00000556102 CCDC129Q6ZRS4 1044 aa22.34■■□□□ 1.17
CDKN3-209ENST00000556102 FAM160B2Q86V87 743 aa22.34■■□□□ 1.17
CDKN3-209ENST00000556102 KLHDC9Q8NEP7 349 aa22.34■■□□□ 1.17
CDKN3-209ENST00000556102 CHURC1Q8WUH1 139 aa22.34■■□□□ 1.17
CDKN3-209ENST00000556102 FGD4Q96M96 766 aa22.34■■□□□ 1.17
CDKN3-209ENST00000556102 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.34■■□□□ 1.17
CDKN3-209ENST00000556102 ISY1Q9ULR0 285 aaKnown RBP22.34■■□□□ 1.17
CDKN3-209ENST00000556102 DUSP11O75319 330 aaKnown RBP22.33■■□□□ 1.17
CDKN3-209ENST00000556102 CLTBP09497 229 aa22.33■■□□□ 1.17
CDKN3-209ENST00000556102 ACVR2BQ13705 512 aa22.33■■□□□ 1.17
CDKN3-209ENST00000556102 C9orf50Q5SZB4 431 aa22.33■■□□□ 1.17
CDKN3-209ENST00000556102 ANKRD45Q5TZF3 282 aa22.33■■□□□ 1.17
CDKN3-209ENST00000556102 ABHD16BQ9H3Z7 469 aa22.33■■□□□ 1.17
CDKN3-209ENST00000556102 MOXD2PA6NHM9 499 aa22.32■■□□□ 1.16
CDKN3-209ENST00000556102 TSPY2A6NKD2 308 aa22.32■■□□□ 1.16
CDKN3-209ENST00000556102 SLC1A4P43007 532 aa22.32■■□□□ 1.16
CDKN3-209ENST00000556102 ACLYP53396 1101 aa22.32■■□□□ 1.16
CDKN3-209ENST00000556102 CTDSPL2Q05D32 466 aa22.32■■□□□ 1.16
CDKN3-209ENST00000556102 IKQ13123 557 aaPredicted RBP22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms