RNA–Protein interactions for RNA: ENST00000554698.5

SDR39U1-208, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 1 (best) BASIC

Gene SDR39U1, Length 1,364 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-208ENST00000554698 PARP14Q460N5 1801 aa25.04■■□□□ 1.6
SDR39U1-208ENST00000554698 GOLGA8HP0CJ92 632 aa25.04■■□□□ 1.6
SDR39U1-208ENST00000554698 IKQ13123 557 aaPredicted RBP25.04■■□□□ 1.6
SDR39U1-208ENST00000554698 GRM4Q14833 912 aa25.04■■□□□ 1.6
SDR39U1-208ENST00000554698 Q3C1V9 767 aa25.04■■□□□ 1.6
SDR39U1-208ENST00000554698 ERO1AQ96HE7 468 aa25.04■■□□□ 1.6
SDR39U1-208ENST00000554698 MAP3K14Q99558 947 aa25.04■■□□□ 1.6
SDR39U1-208ENST00000554698 C22orf23Q9BZE7 217 aa25.04■■□□□ 1.6
SDR39U1-208ENST00000554698 SLC38A10Q9HBR0 1119 aa25.04■■□□□ 1.6
SDR39U1-208ENST00000554698 PRR12Q9ULL5 1215 aa25.04■■□□□ 1.6
SDR39U1-208ENST00000554698 FDX1P10109 184 aa25.03■■□□□ 1.6
SDR39U1-208ENST00000554698 SLC16A2P36021 539 aa25.03■■□□□ 1.6
SDR39U1-208ENST00000554698 RBM25P49756 843 aaKnown RBP25.03■■□□□ 1.6
SDR39U1-208ENST00000554698 TMEM132BQ14DG7 1078 aa25.03■■□□□ 1.6
SDR39U1-208ENST00000554698 Q6ZUG5 572 aa25.03■■□□□ 1.6
SDR39U1-208ENST00000554698 MAD2L2Q9UI95 211 aa25.03■■□□□ 1.6
SDR39U1-208ENST00000554698 SLC12A7Q9Y666 1083 aa25.03■■□□□ 1.6
SDR39U1-208ENST00000554698 PALM3A6NDB9 673 aaPredicted RBP25.02■■□□□ 1.6
SDR39U1-208ENST00000554698 FGD1P98174 961 aa25.02■■□□□ 1.6
SDR39U1-208ENST00000554698 CAP1Q01518 475 aa25.02■■□□□ 1.6
SDR39U1-208ENST00000554698 SYDE2Q5VT97 1194 aa25.02■■□□□ 1.6
SDR39U1-208ENST00000554698 APOA5Q6Q788 366 aa25.02■■□□□ 1.6
SDR39U1-208ENST00000554698 CD99L2Q8TCZ2 262 aa25.02■■□□□ 1.6
SDR39U1-208ENST00000554698 MYL10Q9BUA6 226 aa25.02■■□□□ 1.6
SDR39U1-208ENST00000554698 UPF2Q9HAU5 1272 aaKnown RBP25.02■■□□□ 1.6
SDR39U1-208ENST00000554698 ZNF214Q9UL59 606 aaPredicted RBP25.02■■□□□ 1.6
SDR39U1-208ENST00000554698 BRPF3Q9ULD4 1205 aa25.02■■□□□ 1.6
SDR39U1-208ENST00000554698 ATP2A1O14983 1001 aa25.01■■□□□ 1.59
SDR39U1-208ENST00000554698 ZBED4O75132 1171 aa25.01■■□□□ 1.59
SDR39U1-208ENST00000554698 CALM1P0DP23 149 aa25.01■■□□□ 1.59
SDR39U1-208ENST00000554698 CALM2P0DP24 149 aa25.01■■□□□ 1.59
SDR39U1-208ENST00000554698 CALM3P0DP25 149 aa25.01■■□□□ 1.59
SDR39U1-208ENST00000554698 CTGFP29279 349 aa25.01■■□□□ 1.59
SDR39U1-208ENST00000554698 KIF22Q14807 665 aa25.01■■□□□ 1.59
SDR39U1-208ENST00000554698 STAG2Q8N3U4 1231 aa25.01■■□□□ 1.59
SDR39U1-208ENST00000554698 BRF1Q92994 677 aa25.01■■□□□ 1.59
SDR39U1-208ENST00000554698 ARHGAP39Q9C0H5 1083 aa25.01■■□□□ 1.59
SDR39U1-208ENST00000554698 SPATC1LQ9H0A9 340 aa25.01■■□□□ 1.59
SDR39U1-208ENST00000554698 CCNA1P78396 465 aa25■■□□□ 1.59
SDR39U1-208ENST00000554698 NUP133Q8WUM0 1156 aa25■■□□□ 1.59
SDR39U1-208ENST00000554698 KLRF2D3W0D1 207 aa24.99■■□□□ 1.59
SDR39U1-208ENST00000554698 PSMC4P43686 418 aa24.99■■□□□ 1.59
SDR39U1-208ENST00000554698 OAZ1P54368 228 aa24.99■■□□□ 1.59
SDR39U1-208ENST00000554698 EVCP57679 992 aa24.99■■□□□ 1.59
SDR39U1-208ENST00000554698 TOB2Q14106 344 aaPredicted RBP24.99■■□□□ 1.59
SDR39U1-208ENST00000554698 TRIM47Q96LD4 638 aa24.99■■□□□ 1.59
SDR39U1-208ENST00000554698 KIF2CQ99661 725 aa24.99■■□□□ 1.59
SDR39U1-208ENST00000554698 MOV10L1Q9BXT6 1211 aaKnown RBP24.99■■□□□ 1.59
SDR39U1-208ENST00000554698 UBA5Q9GZZ9 404 aa24.99■■□□□ 1.59
SDR39U1-208ENST00000554698 PORCNQ9H237 461 aa24.99■■□□□ 1.59
SDR39U1-208ENST00000554698 CPVLQ9H3G5 476 aa24.99■■□□□ 1.59
SDR39U1-208ENST00000554698 PDRG1Q9NUG6 133 aa24.99■■□□□ 1.59
SDR39U1-208ENST00000554698 KLF18A0A0U1RQI7 1052 aa24.98■■□□□ 1.59
SDR39U1-208ENST00000554698 KIF5BP33176 963 aa24.98■■□□□ 1.59
SDR39U1-208ENST00000554698 RCAN1P53805 252 aa24.98■■□□□ 1.59
SDR39U1-208ENST00000554698 FCGRTP55899 365 aa24.98■■□□□ 1.59
SDR39U1-208ENST00000554698 SYNE3Q6ZMZ3 975 aa24.98■■□□□ 1.59
SDR39U1-208ENST00000554698 SHCBP1Q8NEM2 672 aa24.98■■□□□ 1.59
SDR39U1-208ENST00000554698 CTCFLQ8NI51 663 aaPredicted RBP24.98■■□□□ 1.59
SDR39U1-208ENST00000554698 TEX13BQ9BXU2 312 aa24.98■■□□□ 1.59
SDR39U1-208ENST00000554698 ALDH8A1Q9H2A2 487 aaPredicted RBP24.98■■□□□ 1.59
SDR39U1-208ENST00000554698 RANBP17Q9H2T7 1088 aaKnown RBP24.98■■□□□ 1.59
SDR39U1-208ENST00000554698 MAPK4P31152 587 aa24.97■■□□□ 1.59
SDR39U1-208ENST00000554698 STAT3P40763 770 aa24.97■■□□□ 1.59
SDR39U1-208ENST00000554698 APOBRQ0VD83 1088 aa24.97■■□□□ 1.59
SDR39U1-208ENST00000554698 PLS1Q14651 629 aa24.97■■□□□ 1.59
SDR39U1-208ENST00000554698 ARHGEF6Q15052 776 aa24.97■■□□□ 1.59
SDR39U1-208ENST00000554698 MICU3Q86XE3 530 aa24.97■■□□□ 1.59
SDR39U1-208ENST00000554698 RIOX2Q8IUF8 465 aa24.97■■□□□ 1.59
SDR39U1-208ENST00000554698 FANCBQ8NB91 859 aa24.97■■□□□ 1.59
SDR39U1-208ENST00000554698 CTDP1Q9Y5B0 961 aaPredicted RBP24.97■■□□□ 1.59
SDR39U1-208ENST00000554698 ZNF536O15090 1300 aa24.97■■□□□ 1.59
SDR39U1-208ENST00000554698 ZBTB43O43298 467 aa24.96■■□□□ 1.59
SDR39U1-208ENST00000554698 GNRH1P01148 92 aa24.96■■□□□ 1.59
SDR39U1-208ENST00000554698 RXRAP19793 462 aa24.96■■□□□ 1.59
SDR39U1-208ENST00000554698 SLC35G1Q2M3R5 365 aa24.96■■□□□ 1.59
SDR39U1-208ENST00000554698 RAB11FIP4Q86YS3 637 aa24.96■■□□□ 1.59
SDR39U1-208ENST00000554698 ADGRF4Q8IZF3 695 aa24.96■■□□□ 1.59
SDR39U1-208ENST00000554698 TBC1D32Q96NH3 1257 aa24.96■■□□□ 1.59
SDR39U1-208ENST00000554698 EFCC1Q9HA90 598 aa24.96■■□□□ 1.59
SDR39U1-208ENST00000554698 RAVER2Q9HCJ3 691 aaKnown RBP24.96■■□□□ 1.59
SDR39U1-208ENST00000554698 TNPO2O14787 897 aaKnown RBP24.95■■□□□ 1.59
SDR39U1-208ENST00000554698 FMNL1O95466 1100 aaPredicted RBP24.95■■□□□ 1.59
SDR39U1-208ENST00000554698 SLC25A27O95847 323 aa24.95■■□□□ 1.59
SDR39U1-208ENST00000554698 SNAP25P60880 206 aa24.95■■□□□ 1.59
SDR39U1-208ENST00000554698 OTOP1Q7RTM1 612 aa24.95■■□□□ 1.59
SDR39U1-208ENST00000554698 CTU1Q7Z7A3 348 aaKnown RBP24.95■■□□□ 1.59
SDR39U1-208ENST00000554698 CPXCR1Q8N123 301 aa24.95■■□□□ 1.59
SDR39U1-208ENST00000554698 ECM2O94769 699 aaPredicted RBP24.94■■□□□ 1.58
SDR39U1-208ENST00000554698 ERCC3P19447 782 aa24.94■■□□□ 1.58
SDR39U1-208ENST00000554698 COPB2P35606 906 aa24.94■■□□□ 1.58
SDR39U1-208ENST00000554698 GNAQP50148 359 aa24.94■■□□□ 1.58
SDR39U1-208ENST00000554698 SNRNP48Q6IEG0 339 aaKnown RBP24.94■■□□□ 1.58
SDR39U1-208ENST00000554698 NBPF11Q86T75 865 aa24.94■■□□□ 1.58
SDR39U1-208ENST00000554698 CCDC144CPQ8IYA2 1237 aa24.94■■□□□ 1.58
SDR39U1-208ENST00000554698 MTMR8Q96EF0 704 aa24.94■■□□□ 1.58
SDR39U1-208ENST00000554698 LZTS2Q9BRK4 669 aa24.94■■□□□ 1.58
SDR39U1-208ENST00000554698 MROH8Q9H579 483 aa24.94■■□□□ 1.58
SDR39U1-208ENST00000554698 RIOX1Q9H6W3 641 aa24.94■■□□□ 1.58
SDR39U1-208ENST00000554698 JMJD4Q9H9V9 463 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms