RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 HMG20BQ9P0W2 317 aa16.68■□□□□ 0.26
SNRPF-203ENST00000551316 PA2G4Q9UQ80 394 aaKnown RBP16.68■□□□□ 0.26
SNRPF-203ENST00000551316 MYH8P13535 1937 aa16.68■□□□□ 0.26
SNRPF-203ENST00000551316 GRIN2DO15399 1336 aa16.68■□□□□ 0.26
SNRPF-203ENST00000551316 RIF1Q5UIP0 2472 aaKnown RBP16.68■□□□□ 0.26
SNRPF-203ENST00000551316 CFAP47Q6ZTR5 3102 aa16.67■□□□□ 0.26
SNRPF-203ENST00000551316 C6orf222P0C671 652 aaPredicted RBP16.67■□□□□ 0.26
SNRPF-203ENST00000551316 SPTY2D1Q68D10 685 aaPredicted RBP16.67■□□□□ 0.26
SNRPF-203ENST00000551316 TRPV6Q9H1D0 765 aa16.67■□□□□ 0.26
SNRPF-203ENST00000551316 DHX36Q9H2U1 1008 aaKnown RBP16.67■□□□□ 0.26
SNRPF-203ENST00000551316 PTPRZ1P23471 2315 aaPredicted RBP16.67■□□□□ 0.26
SNRPF-203ENST00000551316 FAM186AA6NE01 2351 aa16.66■□□□□ 0.26
SNRPF-203ENST00000551316 GVINP1Q7Z2Y8 2422 aa16.66■□□□□ 0.26
SNRPF-203ENST00000551316 GRXCR2A6NFK2 248 aa16.66■□□□□ 0.26
SNRPF-203ENST00000551316 SNAI1O95863 264 aaPredicted RBP16.66■□□□□ 0.26
SNRPF-203ENST00000551316 TIMM10P62072 90 aa16.66■□□□□ 0.26
SNRPF-203ENST00000551316 ZP2Q05996 745 aa16.66■□□□□ 0.26
SNRPF-203ENST00000551316 TMCO2Q7Z6W1 182 aaPredicted RBP16.66■□□□□ 0.26
SNRPF-203ENST00000551316 AGBL1Q96MI9 1066 aa16.66■□□□□ 0.26
SNRPF-203ENST00000551316 TANGO6Q9C0B7 1094 aa16.66■□□□□ 0.26
SNRPF-203ENST00000551316 NCOR2Q9Y618 2525 aa16.66■□□□□ 0.26
SNRPF-203ENST00000551316 H3BQ06 376 aaPredicted RBP16.65■□□□□ 0.26
SNRPF-203ENST00000551316 TLR3O15455 904 aaKnown RBP16.65■□□□□ 0.26
SNRPF-203ENST00000551316 MAP4K4O95819 1239 aaPredicted RBP16.65■□□□□ 0.26
SNRPF-203ENST00000551316 FCER1AP12319 257 aa16.65■□□□□ 0.26
SNRPF-203ENST00000551316 USP14P54578 494 aa16.65■□□□□ 0.26
SNRPF-203ENST00000551316 BEX3Q00994 111 aa16.65■□□□□ 0.26
SNRPF-203ENST00000551316 EVX2Q03828 476 aa16.65■□□□□ 0.26
SNRPF-203ENST00000551316 TMEM132BQ14DG7 1078 aa16.65■□□□□ 0.26
SNRPF-203ENST00000551316 TATDN1Q6P1N9 297 aa16.65■□□□□ 0.26
SNRPF-203ENST00000551316 FOXP4Q8IVH2 680 aaPredicted RBP16.65■□□□□ 0.26
SNRPF-203ENST00000551316 VTI1AQ96AJ9 217 aa16.65■□□□□ 0.26
SNRPF-203ENST00000551316 USP44Q9H0E7 712 aa16.65■□□□□ 0.26
SNRPF-203ENST00000551316 UPF3AQ9H1J1 476 aaKnown RBP16.65■□□□□ 0.26
SNRPF-203ENST00000551316 MROH8Q9H579 483 aa16.65■□□□□ 0.26
SNRPF-203ENST00000551316 SLC5A4Q9NY91 659 aa16.65■□□□□ 0.26
SNRPF-203ENST00000551316 CEP126Q9P2H0 1117 aa16.65■□□□□ 0.26
SNRPF-203ENST00000551316 ZHX1Q9UKY1 873 aaPredicted RBP16.65■□□□□ 0.26
SNRPF-203ENST00000551316 ZNF292O60281 2723 aa16.65■□□□□ 0.26
SNRPF-203ENST00000551316 ZNF536O15090 1300 aa16.65■□□□□ 0.26
SNRPF-203ENST00000551316 B4GALT4O60513 344 aa16.64■□□□□ 0.25
SNRPF-203ENST00000551316 PTPN5P54829 565 aa16.64■□□□□ 0.25
SNRPF-203ENST00000551316 COG2Q14746 738 aa16.64■□□□□ 0.25
SNRPF-203ENST00000551316 SLC43A3Q8NBI5 491 aa16.64■□□□□ 0.25
SNRPF-203ENST00000551316 MMP19Q99542 508 aa16.64■□□□□ 0.25
SNRPF-203ENST00000551316 TRIM34Q9BYJ4 488 aa16.64■□□□□ 0.25
SNRPF-203ENST00000551316 RAI14Q9P0K7 980 aa16.64■□□□□ 0.25
SNRPF-203ENST00000551316 MUTYHQ9UIF7 546 aa16.64■□□□□ 0.25
SNRPF-203ENST00000551316 ASTN1O14525 1302 aa16.64■□□□□ 0.25
SNRPF-203ENST00000551316 CIAO1O76071 339 aa16.63■□□□□ 0.25
SNRPF-203ENST00000551316 IRS1P35568 1242 aa16.63■□□□□ 0.25
SNRPF-203ENST00000551316 DEFB128Q7Z7B8 93 aa16.63■□□□□ 0.25
SNRPF-203ENST00000551316 CLEC10AQ8IUN9 316 aa16.63■□□□□ 0.25
SNRPF-203ENST00000551316 MTUS1Q9ULD2 1270 aa16.63■□□□□ 0.25
SNRPF-203ENST00000551316 SOWAHBA6NEL2 793 aa16.62■□□□□ 0.25
SNRPF-203ENST00000551316 C19orf67A6NJJ6 358 aa16.62■□□□□ 0.25
SNRPF-203ENST00000551316 DUSP11O75319 330 aaKnown RBP16.62■□□□□ 0.25
SNRPF-203ENST00000551316 DSG3P32926 999 aa16.62■□□□□ 0.25
SNRPF-203ENST00000551316 GSTO1P78417 241 aa16.62■□□□□ 0.25
SNRPF-203ENST00000551316 SEPT2Q15019 361 aa16.62■□□□□ 0.25
SNRPF-203ENST00000551316 CXCL17Q6UXB2 119 aa16.62■□□□□ 0.25
SNRPF-203ENST00000551316 HERC6Q8IVU3 1022 aa16.62■□□□□ 0.25
SNRPF-203ENST00000551316 XAGE2Q96GT9 111 aa16.62■□□□□ 0.25
SNRPF-203ENST00000551316 IL16Q14005 1332 aa16.62■□□□□ 0.25
SNRPF-203ENST00000551316 CHD6Q8TD26 2715 aa16.61■□□□□ 0.25
SNRPF-203ENST00000551316 LDHCP07864 332 aa16.61■□□□□ 0.25
SNRPF-203ENST00000551316 SHMT1P34896 483 aa16.61■□□□□ 0.25
SNRPF-203ENST00000551316 GJA9P57773 515 aa16.61■□□□□ 0.25
SNRPF-203ENST00000551316 DYNLL1P63167 89 aaKnown RBP16.61■□□□□ 0.25
SNRPF-203ENST00000551316 ASCL5Q7RTU5 278 aa16.61■□□□□ 0.25
SNRPF-203ENST00000551316 NEK9Q8TD19 979 aa16.61■□□□□ 0.25
SNRPF-203ENST00000551316 FGD4Q96M96 766 aa16.61■□□□□ 0.25
SNRPF-203ENST00000551316 MFSD14AQ96MC6 490 aa16.61■□□□□ 0.25
SNRPF-203ENST00000551316 FAM184BQ9ULE4 1060 aa16.61■□□□□ 0.25
SNRPF-203ENST00000551316 CNPY2Q9Y2B0 182 aa16.61■□□□□ 0.25
SNRPF-203ENST00000551316 A0A1B0GUL7 405 aa16.6■□□□□ 0.25
SNRPF-203ENST00000551316 MCAMP43121 646 aa16.6■□□□□ 0.25
SNRPF-203ENST00000551316 PSMC6P62333 389 aa16.6■□□□□ 0.25
SNRPF-203ENST00000551316 CCDC27Q2M243 656 aa16.6■□□□□ 0.25
SNRPF-203ENST00000551316 ABCB5Q2M3G0 1257 aa16.6■□□□□ 0.25
SNRPF-203ENST00000551316 GNASQ5JWF2 1037 aa16.6■□□□□ 0.25
SNRPF-203ENST00000551316 SPATA5Q8NB90 893 aa16.6■□□□□ 0.25
SNRPF-203ENST00000551316 SUGCTQ9HAC7 445 aa16.6■□□□□ 0.25
SNRPF-203ENST00000551316 LCTP09848 1927 aa16.6■□□□□ 0.25
SNRPF-203ENST00000551316 NLRC5Q86WI3 1866 aa16.59■□□□□ 0.25
SNRPF-203ENST00000551316 TRIP12Q14669 1992 aaPredicted RBP16.59■□□□□ 0.25
SNRPF-203ENST00000551316 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.59■□□□□ 0.25
SNRPF-203ENST00000551316 MED19A0JLT2 244 aaPredicted RBP16.59■□□□□ 0.25
SNRPF-203ENST00000551316 PCSK9Q8NBP7 692 aaKnown RBP16.59■□□□□ 0.25
SNRPF-203ENST00000551316 SLC9A7Q96T83 725 aa16.59■□□□□ 0.25
SNRPF-203ENST00000551316 FBXO28Q9NVF7 368 aa16.59■□□□□ 0.25
SNRPF-203ENST00000551316 DIS3Q9Y2L1 958 aaKnown RBP16.59■□□□□ 0.25
SNRPF-203ENST00000551316 FRYLO94915 3013 aa16.58■□□□□ 0.24
SNRPF-203ENST00000551316 FLOT1O75955 427 aa16.58■□□□□ 0.24
SNRPF-203ENST00000551316 CYP2C9P11712 490 aa16.58■□□□□ 0.24
SNRPF-203ENST00000551316 VCPP55072 806 aaKnown RBP16.58■□□□□ 0.24
SNRPF-203ENST00000551316 CCDC144BQ3MJ40 725 aa16.58■□□□□ 0.24
SNRPF-203ENST00000551316 SPICE1Q8N0Z3 855 aa16.58■□□□□ 0.24
SNRPF-203ENST00000551316 KATNBL1Q9H079 304 aa16.58■□□□□ 0.24
SNRPF-203ENST00000551316 HOXC10Q9NYD6 342 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms