RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 CYP2E1P05181 493 aaPredicted RBP17.43■□□□□ 0.38
RBFOX1-212ENST00000550418 PLS1Q14651 629 aa17.43■□□□□ 0.38
RBFOX1-212ENST00000550418 NELFCDQ8IXH7 590 aa17.43■□□□□ 0.38
RBFOX1-212ENST00000550418 KIFAP3Q92845 792 aa17.43■□□□□ 0.38
RBFOX1-212ENST00000550418 KIF2CQ99661 725 aa17.43■□□□□ 0.38
RBFOX1-212ENST00000550418 FAM169AQ9Y6X4 670 aa17.43■□□□□ 0.38
RBFOX1-212ENST00000550418 CHUKO15111 745 aa17.43■□□□□ 0.38
RBFOX1-212ENST00000550418 SUN1O94901 812 aa17.43■□□□□ 0.38
RBFOX1-212ENST00000550418 ALS2CLQ60I27 953 aa17.43■□□□□ 0.38
RBFOX1-212ENST00000550418 INTS9Q9NV88 658 aaKnown RBP17.43■□□□□ 0.38
RBFOX1-212ENST00000550418 CLTCL1P53675 1640 aa17.42■□□□□ 0.38
RBFOX1-212ENST00000550418 IQGAP3Q86VI3 1631 aa17.42■□□□□ 0.38
RBFOX1-212ENST00000550418 CFAP74Q9C0B2 1584 aa17.42■□□□□ 0.38
RBFOX1-212ENST00000550418 HSPA1LP34931 641 aa17.42■□□□□ 0.38
RBFOX1-212ENST00000550418 EHHADHQ08426 723 aa17.42■□□□□ 0.38
RBFOX1-212ENST00000550418 PUM3Q15397 648 aaKnown RBP17.42■□□□□ 0.38
RBFOX1-212ENST00000550418 SDCCAG8Q86SQ7 713 aaPredicted RBP17.42■□□□□ 0.38
RBFOX1-212ENST00000550418 LSM14BQ9BX40 385 aaKnown RBP17.42■□□□□ 0.38
RBFOX1-212ENST00000550418 KIF1BO60333 1816 aa17.42■□□□□ 0.38
RBFOX1-212ENST00000550418 RPN1P04843 607 aaKnown RBP17.42■□□□□ 0.38
RBFOX1-212ENST00000550418 SETSIPP0DME0 302 aa17.42■□□□□ 0.38
RBFOX1-212ENST00000550418 ITGA6P23229 1130 aa17.42■□□□□ 0.38
RBFOX1-212ENST00000550418 MAP7Q14244 749 aa17.42■□□□□ 0.38
RBFOX1-212ENST00000550418 NCAPH2Q6IBW4 605 aa17.42■□□□□ 0.38
RBFOX1-212ENST00000550418 SAMSN1Q9NSI8 373 aaKnown RBP17.42■□□□□ 0.38
RBFOX1-212ENST00000550418 TFCP2L1Q9NZI6 479 aa17.42■□□□□ 0.38
RBFOX1-212ENST00000550418 ZBTB22O15209 634 aa17.42■□□□□ 0.38
RBFOX1-212ENST00000550418 SMIM24O75264 130 aa17.42■□□□□ 0.38
RBFOX1-212ENST00000550418 TROVE2P10155 538 aaKnown RBP eCLIP17.42■□□□□ 0.38
RBFOX1-212ENST00000550418 NEURL1BA8MQ27 555 aa17.41■□□□□ 0.38
RBFOX1-212ENST00000550418 RASIP1Q5U651 963 aa17.41■□□□□ 0.38
RBFOX1-212ENST00000550418 HAUS3Q68CZ6 603 aa17.41■□□□□ 0.38
RBFOX1-212ENST00000550418 FNBP4Q8N3X1 1017 aaPredicted RBP17.41■□□□□ 0.38
RBFOX1-212ENST00000550418 SYMPKQ92797 1274 aaKnown RBP17.41■□□□□ 0.38
RBFOX1-212ENST00000550418 GUCY2CP25092 1073 aa17.41■□□□□ 0.38
RBFOX1-212ENST00000550418 CYP2C19P33261 490 aa17.41■□□□□ 0.38
RBFOX1-212ENST00000550418 KIF23Q02241 960 aaPredicted RBP17.41■□□□□ 0.38
RBFOX1-212ENST00000550418 NECTIN1Q15223 517 aa17.41■□□□□ 0.38
RBFOX1-212ENST00000550418 ZNF589Q86UQ0 364 aaPredicted RBP17.41■□□□□ 0.38
RBFOX1-212ENST00000550418 MAN1B1Q9UKM7 699 aa17.41■□□□□ 0.38
RBFOX1-212ENST00000550418 HIBCHQ6NVY1 386 aaPredicted RBP17.41■□□□□ 0.38
RBFOX1-212ENST00000550418 FANCBQ8NB91 859 aa17.41■□□□□ 0.38
RBFOX1-212ENST00000550418 TUBGCP2Q9BSJ2 902 aa17.41■□□□□ 0.38
RBFOX1-212ENST00000550418 TBC1D7Q9P0N9 293 aa17.41■□□□□ 0.38
RBFOX1-212ENST00000550418 GNA14O95837 355 aa17.41■□□□□ 0.38
RBFOX1-212ENST00000550418 NR1D1P20393 614 aa17.4■□□□□ 0.38
RBFOX1-212ENST00000550418 IFNAR2P48551 515 aa17.4■□□□□ 0.38
RBFOX1-212ENST00000550418 C2orf54Q08AI8 447 aa17.4■□□□□ 0.38
RBFOX1-212ENST00000550418 SEPT14Q6ZU15 432 aa17.4■□□□□ 0.38
RBFOX1-212ENST00000550418 CMTR1Q8N1G2 835 aaKnown RBP17.4■□□□□ 0.38
RBFOX1-212ENST00000550418 U2AF1L4Q8WU68 220 aaKnown RBP17.4■□□□□ 0.38
RBFOX1-212ENST00000550418 ZNF622Q969S3 477 aaKnown RBP eCLIP17.4■□□□□ 0.38
RBFOX1-212ENST00000550418 TRIM4Q9C037 500 aa17.4■□□□□ 0.38
RBFOX1-212ENST00000550418 UHMK1Q8TAS1 419 aaKnown RBP17.4■□□□□ 0.38
RBFOX1-212ENST00000550418 PGBD1Q96JS3 809 aa17.4■□□□□ 0.38
RBFOX1-212ENST00000550418 USP21Q9UK80 565 aa17.4■□□□□ 0.38
RBFOX1-212ENST00000550418 TPX2Q9ULW0 747 aaKnown RBP17.4■□□□□ 0.38
RBFOX1-212ENST00000550418 COMMD10Q9Y6G5 202 aa17.4■□□□□ 0.38
RBFOX1-212ENST00000550418 EEF1GP26641 437 aaKnown RBP17.4■□□□□ 0.38
RBFOX1-212ENST00000550418 SH2D4BQ5SQS7 431 aa17.4■□□□□ 0.38
RBFOX1-212ENST00000550418 TET3O43151 1660 aa17.4■□□□□ 0.38
RBFOX1-212ENST00000550418 STAT1P42224 750 aa17.4■□□□□ 0.38
RBFOX1-212ENST00000550418 RASSF7Q02833 373 aa17.4■□□□□ 0.38
RBFOX1-212ENST00000550418 PTPROQ16827 1216 aa17.4■□□□□ 0.38
RBFOX1-212ENST00000550418 RETREG2Q8NC44 543 aa17.4■□□□□ 0.38
RBFOX1-212ENST00000550418 KCNF1Q9H3M0 494 aa17.4■□□□□ 0.38
RBFOX1-212ENST00000550418 NIP7Q9Y221 180 aaKnown RBP eCLIP17.4■□□□□ 0.38
RBFOX1-212ENST00000550418 SYNMO15061 1565 aa17.39■□□□□ 0.38
RBFOX1-212ENST00000550418 CTNND1O60716 968 aaKnown RBP17.39■□□□□ 0.37
RBFOX1-212ENST00000550418 NDUFA10O95299 355 aa17.39■□□□□ 0.37
RBFOX1-212ENST00000550418 KRT5P13647 590 aa17.39■□□□□ 0.37
RBFOX1-212ENST00000550418 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.39■□□□□ 0.37
RBFOX1-212ENST00000550418 KLHL29Q96CT2 875 aa17.39■□□□□ 0.37
RBFOX1-212ENST00000550418 CASQ2O14958 399 aaPredicted RBP17.39■□□□□ 0.37
RBFOX1-212ENST00000550418 EEF2KMTQ96G04 330 aa17.39■□□□□ 0.37
RBFOX1-212ENST00000550418 NLRP3Q96P20 1036 aa17.39■□□□□ 0.37
RBFOX1-212ENST00000550418 H2AFZP0C0S5 128 aa17.39■□□□□ 0.37
RBFOX1-212ENST00000550418 PLCG2P16885 1265 aa17.39■□□□□ 0.37
RBFOX1-212ENST00000550418 SESN3P58005 492 aa17.39■□□□□ 0.37
RBFOX1-212ENST00000550418 H2AFVQ71UI9 128 aa17.39■□□□□ 0.37
RBFOX1-212ENST00000550418 DZIP3Q86Y13 1208 aaKnown RBP17.39■□□□□ 0.37
RBFOX1-212ENST00000550418 RNF168Q8IYW5 571 aaPredicted RBP17.39■□□□□ 0.37
RBFOX1-212ENST00000550418 RNF14Q9UBS8 474 aa17.39■□□□□ 0.37
RBFOX1-212ENST00000550418 I3L4J1 428 aa17.39■□□□□ 0.37
RBFOX1-212ENST00000550418 PTGDRQ13258 359 aa17.39■□□□□ 0.37
RBFOX1-212ENST00000550418 EMBQ6PCB8 327 aa17.39■□□□□ 0.37
RBFOX1-212ENST00000550418 ZNF496Q96IT1 587 aaPredicted RBP17.39■□□□□ 0.37
RBFOX1-212ENST00000550418 NBPF5PQ86XG9 351 aaPredicted RBP17.38■□□□□ 0.37
RBFOX1-212ENST00000550418 SMYD4Q8IYR2 804 aaPredicted RBP17.38■□□□□ 0.37
RBFOX1-212ENST00000550418 MAIP1Q8WWC4 291 aa17.38■□□□□ 0.37
RBFOX1-212ENST00000550418 ARHGEF10O15013 1369 aa17.38■□□□□ 0.37
RBFOX1-212ENST00000550418 B4DLN1 442 aa17.38■□□□□ 0.37
RBFOX1-212ENST00000550418 ABCB4P21439 1286 aa17.38■□□□□ 0.37
RBFOX1-212ENST00000550418 BAG6P46379 1132 aa17.38■□□□□ 0.37
RBFOX1-212ENST00000550418 PICALMQ13492 652 aa17.38■□□□□ 0.37
RBFOX1-212ENST00000550418 CALCRLQ16602 461 aa17.38■□□□□ 0.37
RBFOX1-212ENST00000550418 MYOCDQ8IZQ8 938 aa17.38■□□□□ 0.37
RBFOX1-212ENST00000550418 TCHPQ9BT92 498 aa17.38■□□□□ 0.37
RBFOX1-212ENST00000550418 DENND2AQ9ULE3 1009 aa17.38■□□□□ 0.37
RBFOX1-212ENST00000550418 COBLO75128 1261 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms