RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 NLRP1Q9C000 1473 aa8.2□□□□□ -1.1
TGFBR1-208ENST00000550253 LOC100289279A0A1B0GTE1 492 aa8.19□□□□□ -1.1
TGFBR1-208ENST00000550253 FAM83GA6ND36 823 aa8.19□□□□□ -1.1
TGFBR1-208ENST00000550253 C9IYK1 514 aa8.19□□□□□ -1.1
TGFBR1-208ENST00000550253 ALDH1L1O75891 902 aa8.19□□□□□ -1.1
TGFBR1-208ENST00000550253 EYA4O95677 639 aa8.19□□□□□ -1.1
TGFBR1-208ENST00000550253 EPHX1P07099 455 aa8.19□□□□□ -1.1
TGFBR1-208ENST00000550253 SLFN14P0C7P3 912 aa8.19□□□□□ -1.1
TGFBR1-208ENST00000550253 NAT2P11245 290 aa8.19□□□□□ -1.1
TGFBR1-208ENST00000550253 SUZ12Q15022 739 aaKnown RBP8.19□□□□□ -1.1
TGFBR1-208ENST00000550253 MRPL41Q8IXM3 137 aaKnown RBP8.19□□□□□ -1.1
TGFBR1-208ENST00000550253 KLHL23Q8NBE8 558 aa8.19□□□□□ -1.1
TGFBR1-208ENST00000550253 HAUS7Q99871 368 aa8.19□□□□□ -1.1
TGFBR1-208ENST00000550253 FAM86C1Q9NVL1 165 aa8.19□□□□□ -1.1
TGFBR1-208ENST00000550253 MAGEC2Q9UBF1 373 aaPredicted RBP8.19□□□□□ -1.1
TGFBR1-208ENST00000550253 GDF2Q9UK05 429 aaPredicted RBP8.19□□□□□ -1.1
TGFBR1-208ENST00000550253 ABCC3O15438 1527 aa8.19□□□□□ -1.1
TGFBR1-208ENST00000550253 FANCGO15287 622 aa8.19□□□□□ -1.1
TGFBR1-208ENST00000550253 TOM1O60784 492 aa8.19□□□□□ -1.1
TGFBR1-208ENST00000550253 TP53P04637 393 aaPredicted RBP8.19□□□□□ -1.1
TGFBR1-208ENST00000550253 ITGAVP06756 1048 aa8.19□□□□□ -1.1
TGFBR1-208ENST00000550253 FGFR1P11362 822 aa8.19□□□□□ -1.1
TGFBR1-208ENST00000550253 NTF4P34130 210 aa8.19□□□□□ -1.1
TGFBR1-208ENST00000550253 MAP2K3P46734 347 aa8.19□□□□□ -1.1
TGFBR1-208ENST00000550253 NFE2Q16621 373 aaPredicted RBP8.19□□□□□ -1.1
TGFBR1-208ENST00000550253 TDRD10Q5VZ19 366 aaKnown RBP8.19□□□□□ -1.1
TGFBR1-208ENST00000550253 SLC6A19Q695T7 634 aa8.19□□□□□ -1.1
TGFBR1-208ENST00000550253 STRA8Q7Z7C7 330 aa8.19□□□□□ -1.1
TGFBR1-208ENST00000550253 PHACTR4Q8IZ21 702 aa8.19□□□□□ -1.1
TGFBR1-208ENST00000550253 DDX1Q92499 740 aaKnown RBP8.19□□□□□ -1.1
TGFBR1-208ENST00000550253 TSR2Q969E8 191 aaKnown RBP8.19□□□□□ -1.1
TGFBR1-208ENST00000550253 IPO9Q96P70 1041 aaKnown RBP8.19□□□□□ -1.1
TGFBR1-208ENST00000550253 USP26Q9BXU7 913 aa8.19□□□□□ -1.1
TGFBR1-208ENST00000550253 APEX2Q9UBZ4 518 aa8.19□□□□□ -1.1
TGFBR1-208ENST00000550253 CBFA2T2O43439 604 aa8.18□□□□□ -1.1
TGFBR1-208ENST00000550253 PEX14O75381 377 aa8.18□□□□□ -1.1
TGFBR1-208ENST00000550253 ALBP02768 609 aa8.18□□□□□ -1.1
TGFBR1-208ENST00000550253 NLRP12P59046 1061 aa8.18□□□□□ -1.1
TGFBR1-208ENST00000550253 SETDB1Q15047 1291 aa8.18□□□□□ -1.1
TGFBR1-208ENST00000550253 TTF1Q15361 905 aaPredicted RBP8.18□□□□□ -1.1
TGFBR1-208ENST00000550253 TRIM61Q5EBN2 209 aa8.18□□□□□ -1.1
TGFBR1-208ENST00000550253 AXDND1Q5T1B0 1012 aaPredicted RBP8.18□□□□□ -1.1
TGFBR1-208ENST00000550253 CNNM4Q6P4Q7 775 aa8.18□□□□□ -1.1
TGFBR1-208ENST00000550253 ZNF227Q86WZ6 799 aa8.18□□□□□ -1.1
TGFBR1-208ENST00000550253 CCDC146Q8IYE0 955 aa8.18□□□□□ -1.1
TGFBR1-208ENST00000550253 GALNT11Q8NCW6 608 aa8.18□□□□□ -1.1
TGFBR1-208ENST00000550253 KLHL25Q9H0H3 589 aa8.18□□□□□ -1.1
TGFBR1-208ENST00000550253 RGS17Q9UGC6 210 aaPredicted RBP8.18□□□□□ -1.1
TGFBR1-208ENST00000550253 MAST1Q9Y2H9 1570 aa8.17□□□□□ -1.1
TGFBR1-208ENST00000550253 ADAM11O75078 769 aa8.17□□□□□ -1.1
TGFBR1-208ENST00000550253 PABPC1P11940 636 aaKnown RBP8.17□□□□□ -1.1
TGFBR1-208ENST00000550253 SNRPBP14678 240 aaKnown RBP8.17□□□□□ -1.1
TGFBR1-208ENST00000550253 GRIA2P42262 883 aa8.17□□□□□ -1.1
TGFBR1-208ENST00000550253 GUCY2FP51841 1108 aa8.17□□□□□ -1.1
TGFBR1-208ENST00000550253 EPHB1P54762 984 aa8.17□□□□□ -1.1
TGFBR1-208ENST00000550253 MAP7Q14244 749 aa8.17□□□□□ -1.1
TGFBR1-208ENST00000550253 HP1BP3Q5SSJ5 553 aaPredicted RBP8.17□□□□□ -1.1
TGFBR1-208ENST00000550253 HEATR6Q6AI08 1181 aaKnown RBP8.17□□□□□ -1.1
TGFBR1-208ENST00000550253 ANKLE2Q86XL3 938 aa8.17□□□□□ -1.1
TGFBR1-208ENST00000550253 HID1Q8IV36 788 aa8.17□□□□□ -1.1
TGFBR1-208ENST00000550253 LRRN4CLQ8ND94 238 aa8.17□□□□□ -1.1
TGFBR1-208ENST00000550253 ATL2Q8NHH9 583 aa8.17□□□□□ -1.1
TGFBR1-208ENST00000550253 SMARCC1Q92922 1105 aaPredicted RBP8.17□□□□□ -1.1
TGFBR1-208ENST00000550253 CCDC74BQ96LY2 380 aa8.17□□□□□ -1.1
TGFBR1-208ENST00000550253 PSMD1Q99460 953 aa8.17□□□□□ -1.1
TGFBR1-208ENST00000550253 LGR4Q9BXB1 951 aa8.17□□□□□ -1.1
TGFBR1-208ENST00000550253 FBRSQ9HAH7 460 aa8.17□□□□□ -1.1
TGFBR1-208ENST00000550253 LRP2BPQ9P2M1 347 aa8.17□□□□□ -1.1
TGFBR1-208ENST00000550253 GMPR2Q9P2T1 348 aaKnown RBP8.17□□□□□ -1.1
TGFBR1-208ENST00000550253 EIF2AK4Q9P2K8 1649 aaKnown RBP8.17□□□□□ -1.1
TGFBR1-208ENST00000550253 ERVK-7P63135 1459 aa8.17□□□□□ -1.1
TGFBR1-208ENST00000550253 DDX3YO15523 660 aaKnown RBP8.16□□□□□ -1.1
TGFBR1-208ENST00000550253 PRC1O43663 620 aa8.16□□□□□ -1.1
TGFBR1-208ENST00000550253 DNAJC8O75937 253 aaPredicted RBP8.16□□□□□ -1.1
TGFBR1-208ENST00000550253 SUMO1P63165 101 aaKnown RBP8.16□□□□□ -1.1
TGFBR1-208ENST00000550253 ID3Q02535 119 aa8.16□□□□□ -1.1
TGFBR1-208ENST00000550253 MSL1Q68DK7 614 aa8.16□□□□□ -1.1
TGFBR1-208ENST00000550253 WWC2Q6AWC2 1192 aa8.16□□□□□ -1.1
TGFBR1-208ENST00000550253 WFDC8Q8IUA0 241 aa8.16□□□□□ -1.1
TGFBR1-208ENST00000550253 RIN3Q8TB24 985 aa8.16□□□□□ -1.1
TGFBR1-208ENST00000550253 OSBP2Q969R2 916 aa8.16□□□□□ -1.1
TGFBR1-208ENST00000550253 TRIM39Q9HCM9 518 aa8.16□□□□□ -1.1
TGFBR1-208ENST00000550253 MBIPQ9NS73 344 aa8.16□□□□□ -1.1
TGFBR1-208ENST00000550253 NSFL1CQ9UNZ2 370 aaKnown RBP8.16□□□□□ -1.1
TGFBR1-208ENST00000550253 TMPRSS2O15393 492 aa8.15□□□□□ -1.1
TGFBR1-208ENST00000550253 PRODHO43272 600 aa8.15□□□□□ -1.1
TGFBR1-208ENST00000550253 LILRB5O75023 590 aa8.15□□□□□ -1.1
TGFBR1-208ENST00000550253 C6orf222P0C671 652 aaPredicted RBP8.15□□□□□ -1.1
TGFBR1-208ENST00000550253 NKG7Q16617 165 aa8.15□□□□□ -1.1
TGFBR1-208ENST00000550253 NSMFQ6X4W1 530 aa8.15□□□□□ -1.1
TGFBR1-208ENST00000550253 DDX46Q7L014 1031 aaKnown RBP8.15□□□□□ -1.1
TGFBR1-208ENST00000550253 THEMISQ8N1K5 641 aaPredicted RBP8.15□□□□□ -1.1
TGFBR1-208ENST00000550253 BAHD1Q8TBE0 780 aaPredicted RBP8.15□□□□□ -1.1
TGFBR1-208ENST00000550253 ZNF507Q8TCN5 953 aa8.15□□□□□ -1.1
TGFBR1-208ENST00000550253 RELTQ969Z4 430 aa8.15□□□□□ -1.1
TGFBR1-208ENST00000550253 CCDC136Q96JN2 1154 aa8.15□□□□□ -1.1
TGFBR1-208ENST00000550253 FGD4Q96M96 766 aa8.15□□□□□ -1.1
TGFBR1-208ENST00000550253 ASPSCR1Q9BZE9 553 aa8.15□□□□□ -1.1
TGFBR1-208ENST00000550253 MYH16Q9H6N6 1097 aa8.15□□□□□ -1.1
TGFBR1-208ENST00000550253 CRIM1Q9NZV1 1036 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms