RNA–Protein interactions for RNA: ENST00000544658.5

CDK2AP1-206, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 2 BASIC

Gene CDK2AP1, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-206ENST00000544658 PALM3A6NDB9 673 aaPredicted RBP11.05□□□□□ -0.64
CDK2AP1-206ENST00000544658 SNPHO15079 494 aa11.05□□□□□ -0.64
CDK2AP1-206ENST00000544658 CYTH3O43739 400 aa11.05□□□□□ -0.64
CDK2AP1-206ENST00000544658 CTDNEP1O95476 244 aa11.05□□□□□ -0.64
CDK2AP1-206ENST00000544658 ZBTB48P10074 688 aaPredicted RBP11.05□□□□□ -0.64
CDK2AP1-206ENST00000544658 ADD1P35611 737 aaKnown RBP11.05□□□□□ -0.64
CDK2AP1-206ENST00000544658 ZNF543Q08ER8 600 aa11.05□□□□□ -0.64
CDK2AP1-206ENST00000544658 FUT2Q10981 343 aa11.05□□□□□ -0.64
CDK2AP1-206ENST00000544658 PDAP1Q13442 181 aaKnown RBP11.05□□□□□ -0.64
CDK2AP1-206ENST00000544658 SNAPC2Q13487 334 aa11.05□□□□□ -0.64
CDK2AP1-206ENST00000544658 GRM4Q14833 912 aa11.05□□□□□ -0.64
CDK2AP1-206ENST00000544658 NFXL1Q6ZNB6 911 aa11.05□□□□□ -0.64
CDK2AP1-206ENST00000544658 MICU3Q86XE3 530 aa11.05□□□□□ -0.64
CDK2AP1-206ENST00000544658 hCG_1642624A0A1W2PR95 340 aa11.04□□□□□ -0.64
CDK2AP1-206ENST00000544658 CCDC69A6NI79 296 aa11.04□□□□□ -0.64
CDK2AP1-206ENST00000544658 GOLGA8BA8MQT2 603 aa11.04□□□□□ -0.64
CDK2AP1-206ENST00000544658 C19orf81C9J6K1 198 aa11.04□□□□□ -0.64
CDK2AP1-206ENST00000544658 CYP2C8P10632 490 aa11.04□□□□□ -0.64
CDK2AP1-206ENST00000544658 BMP3P12645 472 aa11.04□□□□□ -0.64
CDK2AP1-206ENST00000544658 GTF2A2P52657 109 aa11.04□□□□□ -0.64
CDK2AP1-206ENST00000544658 SCRN1Q12765 414 aa11.04□□□□□ -0.64
CDK2AP1-206ENST00000544658 NTRK3Q16288 839 aa11.04□□□□□ -0.64
CDK2AP1-206ENST00000544658 CATSPERGQ6ZRH7 1159 aa11.04□□□□□ -0.64
CDK2AP1-206ENST00000544658 SRBD1Q8N5C6 995 aaKnown RBP11.04□□□□□ -0.64
CDK2AP1-206ENST00000544658 PDCD7Q8N8D1 485 aaKnown RBP11.04□□□□□ -0.64
CDK2AP1-206ENST00000544658 CCDC102AQ96A19 550 aa11.04□□□□□ -0.64
CDK2AP1-206ENST00000544658 GMCL1Q96IK5 515 aa11.04□□□□□ -0.64
CDK2AP1-206ENST00000544658 P2RX7Q99572 595 aaKnown RBP11.04□□□□□ -0.64
CDK2AP1-206ENST00000544658 NAP1L2Q9ULW6 460 aaPredicted RBP11.04□□□□□ -0.64
CDK2AP1-206ENST00000544658 SLC12A7Q9Y666 1083 aa11.04□□□□□ -0.64
CDK2AP1-206ENST00000544658 THSD7BQ9C0I4 1608 aa11.04□□□□□ -0.64
CDK2AP1-206ENST00000544658 ZSWIM8A7E2V4 1837 aa11.03□□□□□ -0.64
CDK2AP1-206ENST00000544658 ERICH2A1L162 156 aa11.03□□□□□ -0.64
CDK2AP1-206ENST00000544658 TMEM232C9JQI7 657 aa11.03□□□□□ -0.64
CDK2AP1-206ENST00000544658 PDHXO00330 501 aa11.03□□□□□ -0.64
CDK2AP1-206ENST00000544658 ZBTB43O43298 467 aa11.03□□□□□ -0.64
CDK2AP1-206ENST00000544658 PFKFB2O60825 505 aa11.03□□□□□ -0.64
CDK2AP1-206ENST00000544658 CNMDO75829 334 aa11.03□□□□□ -0.64
CDK2AP1-206ENST00000544658 CETPP11597 493 aa11.03□□□□□ -0.64
CDK2AP1-206ENST00000544658 SLC1A4P43007 532 aa11.03□□□□□ -0.64
CDK2AP1-206ENST00000544658 TM4SF4P48230 202 aa11.03□□□□□ -0.64
CDK2AP1-206ENST00000544658 NT5C2P49902 561 aa11.03□□□□□ -0.64
CDK2AP1-206ENST00000544658 FGD1P98174 961 aa11.03□□□□□ -0.64
CDK2AP1-206ENST00000544658 CAP1Q01518 475 aa11.03□□□□□ -0.64
CDK2AP1-206ENST00000544658 SART3Q15020 963 aaKnown RBP11.03□□□□□ -0.64
CDK2AP1-206ENST00000544658 CCDC96Q2M329 555 aa11.03□□□□□ -0.64
CDK2AP1-206ENST00000544658 CCDC178Q5BJE1 867 aa11.03□□□□□ -0.64
CDK2AP1-206ENST00000544658 CATIPQ7Z7H3 387 aa11.03□□□□□ -0.64
CDK2AP1-206ENST00000544658 CCDC82Q8N4S0 544 aa11.03□□□□□ -0.64
CDK2AP1-206ENST00000544658 FANCBQ8NB91 859 aa11.03□□□□□ -0.64
CDK2AP1-206ENST00000544658 DCAF4Q8WV16 495 aa11.03□□□□□ -0.64
CDK2AP1-206ENST00000544658 PIBF1Q8WXW3 757 aa11.03□□□□□ -0.64
CDK2AP1-206ENST00000544658 SHISA4Q96DD7 197 aa11.03□□□□□ -0.64
CDK2AP1-206ENST00000544658 ATG4CQ96DT6 458 aa11.03□□□□□ -0.64
CDK2AP1-206ENST00000544658 TMEM121BQ9BXQ6 578 aaPredicted RBP11.03□□□□□ -0.64
CDK2AP1-206ENST00000544658 TBC1D2Q9BYX2 928 aa11.03□□□□□ -0.64
CDK2AP1-206ENST00000544658 ASCC2Q9H1I8 757 aaPredicted RBP11.03□□□□□ -0.64
CDK2AP1-206ENST00000544658 GOPCQ9HD26 462 aa11.03□□□□□ -0.64
CDK2AP1-206ENST00000544658 AGTPBP1Q9UPW5 1226 aa11.03□□□□□ -0.64
CDK2AP1-206ENST00000544658 MYH6P13533 1939 aa11.03□□□□□ -0.64
CDK2AP1-206ENST00000544658 A0A0G2JMZ2 1700 aa11.02□□□□□ -0.65
CDK2AP1-206ENST00000544658 MANSC4A6NHS7 340 aaPredicted RBP11.02□□□□□ -0.65
CDK2AP1-206ENST00000544658 GOLGA8AA7E2F4 631 aa11.02□□□□□ -0.65
CDK2AP1-206ENST00000544658 WDR46O15213 610 aaKnown RBP11.02□□□□□ -0.65
CDK2AP1-206ENST00000544658 JAK2O60674 1132 aa11.02□□□□□ -0.65
CDK2AP1-206ENST00000544658 PPP1R11O60927 126 aaPredicted RBP11.02□□□□□ -0.65
CDK2AP1-206ENST00000544658 DDAH1O94760 285 aa11.02□□□□□ -0.65
CDK2AP1-206ENST00000544658 PARP1P09874 1014 aaKnown RBP11.02□□□□□ -0.65
CDK2AP1-206ENST00000544658 HOXA7P31268 230 aaPredicted RBP11.02□□□□□ -0.65
CDK2AP1-206ENST00000544658 USP14P54578 494 aa11.02□□□□□ -0.65
CDK2AP1-206ENST00000544658 TMTC3Q6ZXV5 915 aa11.02□□□□□ -0.65
CDK2AP1-206ENST00000544658 PROCA1Q8NCQ7 364 aaPredicted RBP11.02□□□□□ -0.65
CDK2AP1-206ENST00000544658 REPS2Q8NFH8 660 aa11.02□□□□□ -0.65
CDK2AP1-206ENST00000544658 ZNF274Q96GC6 653 aaPredicted RBP11.02□□□□□ -0.65
CDK2AP1-206ENST00000544658 TMX3Q96JJ7 454 aa11.02□□□□□ -0.65
CDK2AP1-206ENST00000544658 TANGO6Q9C0B7 1094 aa11.02□□□□□ -0.65
CDK2AP1-206ENST00000544658 JMJD4Q9H9V9 463 aa11.02□□□□□ -0.65
CDK2AP1-206ENST00000544658 VAT1LQ9HCJ6 419 aa11.02□□□□□ -0.65
CDK2AP1-206ENST00000544658 TXNRD2Q9NNW7 524 aa11.02□□□□□ -0.65
CDK2AP1-206ENST00000544658 TMOD4Q9NZQ9 345 aa11.02□□□□□ -0.65
CDK2AP1-206ENST00000544658 BTBD7Q9P203 1132 aa11.02□□□□□ -0.65
CDK2AP1-206ENST00000544658 PRR12Q9ULL5 1215 aa11.02□□□□□ -0.65
CDK2AP1-206ENST00000544658 SYNPO2Q9UMS6 1093 aa11.02□□□□□ -0.65
CDK2AP1-206ENST00000544658 LIMCH1Q9UPQ0 1083 aa11.02□□□□□ -0.65
CDK2AP1-206ENST00000544658 DOCK3Q8IZD9 2030 aa11.02□□□□□ -0.65
CDK2AP1-206ENST00000544658 ADGRA2Q96PE1 1338 aa11.02□□□□□ -0.65
CDK2AP1-206ENST00000544658 NID2Q14112 1375 aa11.02□□□□□ -0.65
CDK2AP1-206ENST00000544658 SPDYE16A6NNV3 312 aaPredicted RBP11.01□□□□□ -0.65
CDK2AP1-206ENST00000544658 USP17L15C9J2P7 530 aa11.01□□□□□ -0.65
CDK2AP1-206ENST00000544658 USP17L13C9JLJ4 530 aa11.01□□□□□ -0.65
CDK2AP1-206ENST00000544658 USP17L11C9JVI0 530 aa11.01□□□□□ -0.65
CDK2AP1-206ENST00000544658 KLRF2D3W0D1 207 aa11.01□□□□□ -0.65
CDK2AP1-206ENST00000544658 USP17L18D6R9N7 530 aa11.01□□□□□ -0.65
CDK2AP1-206ENST00000544658 USP17L22D6RA61 530 aa11.01□□□□□ -0.65
CDK2AP1-206ENST00000544658 USP17L17D6RBQ6 530 aa11.01□□□□□ -0.65
CDK2AP1-206ENST00000544658 USP17L19D6RCP7 530 aa11.01□□□□□ -0.65
CDK2AP1-206ENST00000544658 USP17L20D6RJB6 530 aa11.01□□□□□ -0.65
CDK2AP1-206ENST00000544658 ADAMTS3O15072 1205 aa11.01□□□□□ -0.65
CDK2AP1-206ENST00000544658 SLC4A3P48751 1232 aa11.01□□□□□ -0.65
CDK2AP1-206ENST00000544658 USP17L24Q0WX57 530 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms