RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, humanhuman

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-205ENST00000544506 PPM1BO75688 479 aa8.13□□□□□ -1.11
LEMD3-205ENST00000544506 GP2P55259 537 aaKnown RBP8.13□□□□□ -1.11
LEMD3-205ENST00000544506 PLCL1Q15111 1095 aa8.13□□□□□ -1.11
LEMD3-205ENST00000544506 SOGA3Q5TF21 947 aa8.13□□□□□ -1.11
LEMD3-205ENST00000544506 USHBP1Q8N6Y0 703 aa8.13□□□□□ -1.11
LEMD3-205ENST00000544506 AGBL5Q8NDL9 886 aa8.13□□□□□ -1.11
LEMD3-205ENST00000544506 APBA2Q99767 749 aa8.13□□□□□ -1.11
LEMD3-205ENST00000544506 FOXP3Q9BZS1 431 aa8.13□□□□□ -1.11
LEMD3-205ENST00000544506 PRDM7Q9NQW5 492 aa8.13□□□□□ -1.11
LEMD3-205ENST00000544506 LMCD1Q9NZU5 365 aa8.13□□□□□ -1.11
LEMD3-205ENST00000544506 USP35Q9P2H5 1018 aa8.13□□□□□ -1.11
LEMD3-205ENST00000544506 SUGT1Q9Y2Z0 365 aa8.13□□□□□ -1.11
LEMD3-205ENST00000544506 A0A087WZG4 1122 aa8.12□□□□□ -1.11
LEMD3-205ENST00000544506 GSNP06396 782 aa8.12□□□□□ -1.11
LEMD3-205ENST00000544506 PPP2R5DQ14738 602 aa8.12□□□□□ -1.11
LEMD3-205ENST00000544506 EEPD1Q7L9B9 569 aa8.12□□□□□ -1.11
LEMD3-205ENST00000544506 ZDHHC15Q96MV8 337 aa8.12□□□□□ -1.11
LEMD3-205ENST00000544506 TCFL5Q9UL49 500 aa8.12□□□□□ -1.11
LEMD3-205ENST00000544506 CCDC85CA6NKD9 419 aa8.11□□□□□ -1.11
LEMD3-205ENST00000544506 SYPP08247 313 aa8.11□□□□□ -1.11
LEMD3-205ENST00000544506 BMP8BP34820 402 aa8.11□□□□□ -1.11
LEMD3-205ENST00000544506 PCBP3P57721 371 aaKnown RBP8.11□□□□□ -1.11
LEMD3-205ENST00000544506 TEKQ02763 1124 aa8.11□□□□□ -1.11
LEMD3-205ENST00000544506 SLC10A6Q3KNW5 377 aa8.11□□□□□ -1.11
LEMD3-205ENST00000544506 RNF111Q6ZNA4 994 aa8.11□□□□□ -1.11
LEMD3-205ENST00000544506 CGGBP1Q9UFW8 167 aaPredicted RBP8.11□□□□□ -1.11
LEMD3-205ENST00000544506 ADAMTS6Q9UKP5 1117 aa8.11□□□□□ -1.11
LEMD3-205ENST00000544506 SF3B6Q9Y3B4 125 aaKnown RBP8.11□□□□□ -1.11
LEMD3-205ENST00000544506 SV2CQ496J9 727 aa8.1□□□□□ -1.11
LEMD3-205ENST00000544506 SLC23A3Q6PIS1 610 aa8.1□□□□□ -1.11
LEMD3-205ENST00000544506 ABI1Q8IZP0 508 aa8.1□□□□□ -1.11
LEMD3-205ENST00000544506 ARHGEF39Q8N4T4 335 aa8.1□□□□□ -1.11
LEMD3-205ENST00000544506 LINC00116Q8NCU8 138 aa8.1□□□□□ -1.11
LEMD3-205ENST00000544506 PI4K2BQ8TCG2 481 aa8.1□□□□□ -1.11
LEMD3-205ENST00000544506 PPP1R14AQ96A00 147 aa8.1□□□□□ -1.11
LEMD3-205ENST00000544506 RCC1LQ96I51 464 aaKnown RBP8.1□□□□□ -1.11
LEMD3-205ENST00000544506 LGR4Q9BXB1 951 aa8.1□□□□□ -1.11
LEMD3-205ENST00000544506 OSBPL2Q9H1P3 480 aa8.1□□□□□ -1.11
LEMD3-205ENST00000544506 DIS3Q9Y2L1 958 aaKnown RBP8.1□□□□□ -1.11
LEMD3-205ENST00000544506 OAS3Q9Y6K5 1087 aaKnown RBP8.1□□□□□ -1.11
LEMD3-205ENST00000544506 SSU72P8A0A1W2PR75 194 aa8.09□□□□□ -1.11
LEMD3-205ENST00000544506 FKTNO75072 461 aa8.09□□□□□ -1.11
LEMD3-205ENST00000544506 ZNF205O95201 554 aa8.09□□□□□ -1.11
LEMD3-205ENST00000544506 RASA3Q14644 834 aa8.09□□□□□ -1.11
LEMD3-205ENST00000544506 CWF19L1Q69YN2 538 aaKnown RBP8.09□□□□□ -1.11
LEMD3-205ENST00000544506 NBPF11Q86T75 865 aa8.09□□□□□ -1.11
LEMD3-205ENST00000544506 BVESQ8NE79 360 aa8.09□□□□□ -1.11
LEMD3-205ENST00000544506 ALPK1Q96QP1 1244 aa8.09□□□□□ -1.11
LEMD3-205ENST00000544506 LNPKQ9C0E8 428 aa8.09□□□□□ -1.11
LEMD3-205ENST00000544506 EPN3Q9H201 632 aa8.09□□□□□ -1.11
LEMD3-205ENST00000544506 MBNL3Q9NUK0 354 aaKnown RBP8.09□□□□□ -1.11
LEMD3-205ENST00000544506 SLAMF8Q9P0V8 285 aa8.09□□□□□ -1.11
LEMD3-205ENST00000544506 AKT3Q9Y243 479 aa8.09□□□□□ -1.11
LEMD3-205ENST00000544506 PDPK1O15530 556 aa8.08□□□□□ -1.12
LEMD3-205ENST00000544506 RNASE1P07998 156 aaKnown RBP8.08□□□□□ -1.12
LEMD3-205ENST00000544506 VAV1P15498 845 aa8.08□□□□□ -1.12
LEMD3-205ENST00000544506 ZNF792Q3KQV3 632 aa8.08□□□□□ -1.12
LEMD3-205ENST00000544506 RALGPS1Q5JS13 557 aa8.08□□□□□ -1.12
LEMD3-205ENST00000544506 ST13P5Q8NFI4 369 aaPredicted RBP8.08□□□□□ -1.12
LEMD3-205ENST00000544506 DEPDC7Q96QD5 511 aa8.08□□□□□ -1.12
LEMD3-205ENST00000544506 CCDC113Q9H0I3 377 aa8.08□□□□□ -1.12
LEMD3-205ENST00000544506 SNTG2Q9NY99 539 aa8.08□□□□□ -1.12
LEMD3-205ENST00000544506 EMC9Q9Y3B6 208 aa8.08□□□□□ -1.12
LEMD3-205ENST00000544506 DNAJC25-GNG10A0A024R161 153 aa8.07□□□□□ -1.12
LEMD3-205ENST00000544506 TMEM82A0PJX8 343 aa8.07□□□□□ -1.12
LEMD3-205ENST00000544506 VAMP4O75379 141 aa8.07□□□□□ -1.12
LEMD3-205ENST00000544506 CD3EP07766 207 aa8.07□□□□□ -1.12
LEMD3-205ENST00000544506 POU4F1Q01851 419 aa8.07□□□□□ -1.12
LEMD3-205ENST00000544506 GRB10Q13322 594 aa8.07□□□□□ -1.12
LEMD3-205ENST00000544506 RASGRF1Q13972 1273 aa8.07□□□□□ -1.12
LEMD3-205ENST00000544506 ZNF227Q86WZ6 799 aa8.07□□□□□ -1.12
LEMD3-205ENST00000544506 LRRN4CLQ8ND94 238 aa8.07□□□□□ -1.12
LEMD3-205ENST00000544506 MKL1Q969V6 931 aa8.07□□□□□ -1.12
LEMD3-205ENST00000544506 SLC12A9Q9BXP2 914 aa8.07□□□□□ -1.12
LEMD3-205ENST00000544506 LRP2BPQ9P2M1 347 aa8.07□□□□□ -1.12
LEMD3-205ENST00000544506 FAM221BA6H8Z2 402 aa8.06□□□□□ -1.12
LEMD3-205ENST00000544506 NOP56O00567 594 aaKnown RBP8.06□□□□□ -1.12
LEMD3-205ENST00000544506 KCNH1O95259 989 aa8.06□□□□□ -1.12
LEMD3-205ENST00000544506 ITGAVP06756 1048 aa8.06□□□□□ -1.12
LEMD3-205ENST00000544506 RPL10P27635 214 aaKnown RBP8.06□□□□□ -1.12
LEMD3-205ENST00000544506 RTP2Q5QGT7 225 aa8.06□□□□□ -1.12
LEMD3-205ENST00000544506 POMZP3Q6PJE2 187 aa8.06□□□□□ -1.12
LEMD3-205ENST00000544506 ZPBP2Q6X784 338 aa8.06□□□□□ -1.12
LEMD3-205ENST00000544506 WAPLQ7Z5K2 1190 aa8.06□□□□□ -1.12
LEMD3-205ENST00000544506 TRIM59Q8IWR1 403 aa8.06□□□□□ -1.12
LEMD3-205ENST00000544506 CRACR2BQ8N4Y2 399 aaPredicted RBP8.06□□□□□ -1.12
LEMD3-205ENST00000544506 MRGPRX3Q96LB0 322 aa8.06□□□□□ -1.12
LEMD3-205ENST00000544506 SRPK1Q96SB4 655 aaKnown RBP8.06□□□□□ -1.12
LEMD3-205ENST00000544506 MCMBPQ9BTE3 642 aa8.06□□□□□ -1.12
LEMD3-205ENST00000544506 TMEM59LQ9UK28 342 aa8.06□□□□□ -1.12
LEMD3-205ENST00000544506 ZNF281Q9Y2X9 895 aa8.06□□□□□ -1.12
LEMD3-205ENST00000544506 TBX1O43435 398 aa8.05□□□□□ -1.12
LEMD3-205ENST00000544506 GSTM1P09488 218 aa8.05□□□□□ -1.12
LEMD3-205ENST00000544506 IFNGR1P15260 489 aa8.05□□□□□ -1.12
LEMD3-205ENST00000544506 AMPD2Q01433 879 aa8.05□□□□□ -1.12
LEMD3-205ENST00000544506 BMS1Q14692 1282 aaKnown RBP8.05□□□□□ -1.12
LEMD3-205ENST00000544506 DPY19L1Q2PZI1 675 aa8.05□□□□□ -1.12
LEMD3-205ENST00000544506 CCDC144BQ3MJ40 725 aa8.05□□□□□ -1.12
LEMD3-205ENST00000544506 SPATC1Q76KD6 591 aa8.05□□□□□ -1.12
LEMD3-205ENST00000544506 DPH6Q7L8W6 267 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms