RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 FLT1P17948 1338 aa20.07■□□□□ 0.8
SCARB1-208ENST00000544327 PRPHP41219 470 aa20.06■□□□□ 0.8
SCARB1-208ENST00000544327 RHBDL3P58872 404 aa20.06■□□□□ 0.8
SCARB1-208ENST00000544327 TEX11Q8IYF3 940 aa20.06■□□□□ 0.8
SCARB1-208ENST00000544327 CRAMP1Q96RY5 1269 aa20.06■□□□□ 0.8
SCARB1-208ENST00000544327 EYA3Q99504 573 aa20.06■□□□□ 0.8
SCARB1-208ENST00000544327 FEZ1Q99689 392 aa20.06■□□□□ 0.8
SCARB1-208ENST00000544327 ITIH6Q6UXX5 1313 aa20.06■□□□□ 0.8
SCARB1-208ENST00000544327 MYH1P12882 1939 aa20.06■□□□□ 0.8
SCARB1-208ENST00000544327 KLRG2A4D1S0 409 aaPredicted RBP20.06■□□□□ 0.8
SCARB1-208ENST00000544327 MYL1P05976 194 aa20.06■□□□□ 0.8
SCARB1-208ENST00000544327 NAA30Q147X3 362 aaPredicted RBP20.06■□□□□ 0.8
SCARB1-208ENST00000544327 PTPN21Q16825 1174 aa20.06■□□□□ 0.8
SCARB1-208ENST00000544327 ZNF658Q5TYW1 1059 aaPredicted RBP20.06■□□□□ 0.8
SCARB1-208ENST00000544327 KLHL10Q6JEL2 608 aa20.06■□□□□ 0.8
SCARB1-208ENST00000544327 HOMER1Q86YM7 354 aa20.06■□□□□ 0.8
SCARB1-208ENST00000544327 CCSER1Q9C0I3 900 aa20.06■□□□□ 0.8
SCARB1-208ENST00000544327 ZMYND12Q9H0C1 365 aa20.06■□□□□ 0.8
SCARB1-208ENST00000544327 LIMA1Q9UHB6 759 aaKnown RBP20.06■□□□□ 0.8
SCARB1-208ENST00000544327 SAP30BPQ9UHR5 308 aaKnown RBP20.06■□□□□ 0.8
SCARB1-208ENST00000544327 LRRC10BA6NIK2 292 aa20.05■□□□□ 0.8
SCARB1-208ENST00000544327 AKR1B15C9JRZ8 316 aaPredicted RBP20.05■□□□□ 0.8
SCARB1-208ENST00000544327 FILIP1LQ4L180 1135 aa20.05■□□□□ 0.8
SCARB1-208ENST00000544327 SLC27A3Q5K4L6 730 aa20.05■□□□□ 0.8
SCARB1-208ENST00000544327 DTHD1Q6ZMT9 781 aa20.05■□□□□ 0.8
SCARB1-208ENST00000544327 TMC4Q7Z404 712 aa20.05■□□□□ 0.8
SCARB1-208ENST00000544327 CCDC12Q8WUD4 166 aaPredicted RBP20.05■□□□□ 0.8
SCARB1-208ENST00000544327 NAA15Q9BXJ9 866 aaKnown RBP20.05■□□□□ 0.8
SCARB1-208ENST00000544327 DISC1Q9NRI5 854 aa20.05■□□□□ 0.8
SCARB1-208ENST00000544327 PLIN4Q96Q06 1357 aa20.05■□□□□ 0.8
SCARB1-208ENST00000544327 RPN1P04843 607 aaKnown RBP20.04■□□□□ 0.8
SCARB1-208ENST00000544327 STX17P56962 302 aa20.04■□□□□ 0.8
SCARB1-208ENST00000544327 SPAG1Q07617 926 aa20.04■□□□□ 0.8
SCARB1-208ENST00000544327 HEATR3Q7Z4Q2 680 aa20.04■□□□□ 0.8
SCARB1-208ENST00000544327 SMYD4Q8IYR2 804 aaPredicted RBP20.04■□□□□ 0.8
SCARB1-208ENST00000544327 TBC1D16Q8TBP0 767 aa20.04■□□□□ 0.8
SCARB1-208ENST00000544327 RASGRP4Q8TDF6 673 aa20.04■□□□□ 0.8
SCARB1-208ENST00000544327 STX8Q9UNK0 236 aa20.04■□□□□ 0.8
SCARB1-208ENST00000544327 CTNND2Q9UQB3 1225 aa20.04■□□□□ 0.8
SCARB1-208ENST00000544327 QSER1Q2KHR3 1735 aa20.04■□□□□ 0.8
SCARB1-208ENST00000544327 KLRF2D3W0D1 207 aa20.04■□□□□ 0.8
SCARB1-208ENST00000544327 TEX33O43247 280 aa20.04■□□□□ 0.8
SCARB1-208ENST00000544327 ADKP55263 362 aaKnown RBP20.04■□□□□ 0.8
SCARB1-208ENST00000544327 RRAGBQ5VZM2 374 aa20.04■□□□□ 0.8
SCARB1-208ENST00000544327 KRT25Q7Z3Z0 450 aa20.04■□□□□ 0.8
SCARB1-208ENST00000544327 ZNF397Q8NF99 534 aaPredicted RBP20.04■□□□□ 0.8
SCARB1-208ENST00000544327 SRRTQ9BXP5 876 aaKnown RBP20.04■□□□□ 0.8
SCARB1-208ENST00000544327 BLZF1Q9H2G9 400 aa20.04■□□□□ 0.8
SCARB1-208ENST00000544327 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.04■□□□□ 0.81e-6■■■□□ 17.3
SCARB1-208ENST00000544327 PARP1P09874 1014 aaKnown RBP20.03■□□□□ 0.8
SCARB1-208ENST00000544327 FECHP22830 423 aa20.03■□□□□ 0.8
SCARB1-208ENST00000544327 STAT6P42226 847 aa20.03■□□□□ 0.8
SCARB1-208ENST00000544327 PAK1Q13153 545 aa20.03■□□□□ 0.8
SCARB1-208ENST00000544327 KCNB1Q14721 858 aa20.03■□□□□ 0.8
SCARB1-208ENST00000544327 MFSD14BQ5SR56 506 aa20.03■□□□□ 0.8
SCARB1-208ENST00000544327 STAMQ92783 540 aa20.03■□□□□ 0.8
SCARB1-208ENST00000544327 CCDC51Q96ER9 411 aa20.03■□□□□ 0.8
SCARB1-208ENST00000544327 MAGEF1Q9HAY2 307 aa20.03■□□□□ 0.8
SCARB1-208ENST00000544327 POLLQ9UGP5 575 aa20.03■□□□□ 0.8
SCARB1-208ENST00000544327 DNAI1Q9UI46 699 aa20.03■□□□□ 0.8
SCARB1-208ENST00000544327 ORC2Q13416 577 aaPredicted RBP20.02■□□□□ 0.8
SCARB1-208ENST00000544327 NAALADL2Q58DX5 795 aa20.02■□□□□ 0.8
SCARB1-208ENST00000544327 SEPT12Q8IYM1 358 aa20.02■□□□□ 0.8
SCARB1-208ENST00000544327 IGSF22Q8N9C0 903 aa20.02■□□□□ 0.8
SCARB1-208ENST00000544327 AK8Q96MA6 479 aa20.02■□□□□ 0.8
SCARB1-208ENST00000544327 TMEM60Q9H2L4 133 aa20.02■□□□□ 0.8
SCARB1-208ENST00000544327 CUEDC2Q9H467 287 aa20.02■□□□□ 0.8
SCARB1-208ENST00000544327 SUGT1Q9Y2Z0 365 aa20.02■□□□□ 0.8
SCARB1-208ENST00000544327 C10orf71Q711Q0 1435 aa20.02■□□□□ 0.8
SCARB1-208ENST00000544327 ESYT2A0FGR8 921 aa20.02■□□□□ 0.79
SCARB1-208ENST00000544327 INF2Q27J81 1249 aa20.02■□□□□ 0.79
SCARB1-208ENST00000544327 PPFIBP1Q86W92 1011 aa20.02■□□□□ 0.79
SCARB1-208ENST00000544327 hCG_1984214I3L0E3 225 aa20.01■□□□□ 0.79
SCARB1-208ENST00000544327 KARSQ15046 597 aaKnown RBP20.01■□□□□ 0.79
SCARB1-208ENST00000544327 ZNF713Q8N859 430 aaPredicted RBP20.01■□□□□ 0.79
SCARB1-208ENST00000544327 NELFBQ8WX92 580 aa20.01■□□□□ 0.79
SCARB1-208ENST00000544327 KBTBD4Q9NVX7 518 aa20.01■□□□□ 0.79
SCARB1-208ENST00000544327 POLRMTO00411 1230 aaKnown RBP20■□□□□ 0.79
SCARB1-208ENST00000544327 MFAP3LO75121 409 aa20■□□□□ 0.79
SCARB1-208ENST00000544327 GNA11P29992 359 aa20■□□□□ 0.79
SCARB1-208ENST00000544327 DDR1Q08345 913 aa20■□□□□ 0.79
SCARB1-208ENST00000544327 RBL2Q08999 1139 aa20■□□□□ 0.79
SCARB1-208ENST00000544327 TOGARAM2Q6ZUX3 1019 aa20■□□□□ 0.79
SCARB1-208ENST00000544327 SP8Q8IXZ3 490 aa20■□□□□ 0.79
SCARB1-208ENST00000544327 SMAP1Q8IYB5 467 aaPredicted RBP20■□□□□ 0.79
SCARB1-208ENST00000544327 RRP36Q96EU6 259 aaKnown RBP20■□□□□ 0.79
SCARB1-208ENST00000544327 C6orf50Q9HD87 102 aa20■□□□□ 0.79
SCARB1-208ENST00000544327 TRPC5Q9UL62 973 aaPredicted RBP20■□□□□ 0.79
SCARB1-208ENST00000544327 AFF2P51816 1311 aa20■□□□□ 0.79
SCARB1-208ENST00000544327 FANCGO15287 622 aa19.99■□□□□ 0.79
SCARB1-208ENST00000544327 NAPAP54920 295 aa19.99■□□□□ 0.79
SCARB1-208ENST00000544327 NONOQ15233 471 aaKnown RBP eCLIP19.99■□□□□ 0.79
SCARB1-208ENST00000544327 KRT31Q15323 416 aa19.99■□□□□ 0.79
SCARB1-208ENST00000544327 ELF2Q15723 593 aa19.99■□□□□ 0.79
SCARB1-208ENST00000544327 ADSSL1Q8N142 457 aa19.99■□□□□ 0.79
SCARB1-208ENST00000544327 CEP95Q96GE4 821 aa19.99■□□□□ 0.79
SCARB1-208ENST00000544327 H7C1D1 291 aa19.99■□□□□ 0.79
SCARB1-208ENST00000544327 GOLGA8HP0CJ92 632 aa19.99■□□□□ 0.79
SCARB1-208ENST00000544327 UBA7P41226 1012 aa19.99■□□□□ 0.79
SCARB1-208ENST00000544327 COPB1P53618 953 aaKnown RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms