RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 JAG1P78504 1218 aa10.7□□□□□ -0.7
GNE-206ENST00000543356 FAM160A1Q05DH4 1040 aa10.7□□□□□ -0.7
GNE-206ENST00000543356 CCDC96Q2M329 555 aa10.7□□□□□ -0.7
GNE-206ENST00000543356 KIF4BQ2VIQ3 1234 aa10.7□□□□□ -0.7
GNE-206ENST00000543356 AXDND1Q5T1B0 1012 aaPredicted RBP10.7□□□□□ -0.7
GNE-206ENST00000543356 SLFN13Q68D06 897 aa10.7□□□□□ -0.7
GNE-206ENST00000543356 TYW1BQ6NUM6 668 aa10.7□□□□□ -0.7
GNE-206ENST00000543356 PPP1R18Q6NYC8 613 aa10.7□□□□□ -0.7
GNE-206ENST00000543356 FSIP1Q8NA03 581 aa10.7□□□□□ -0.7
GNE-206ENST00000543356 PIGSQ96S52 555 aa10.7□□□□□ -0.7
GNE-206ENST00000543356 CPVLQ9H3G5 476 aa10.7□□□□□ -0.7
GNE-206ENST00000543356 GOLPH3LQ9H4A5 285 aa10.7□□□□□ -0.7
GNE-206ENST00000543356 ZBTB21Q9ULJ3 1066 aa10.7□□□□□ -0.7
GNE-206ENST00000543356 ESYT2A0FGR8 921 aa10.69□□□□□ -0.7
GNE-206ENST00000543356 BMP15O95972 392 aa10.69□□□□□ -0.7
GNE-206ENST00000543356 RASA3Q14644 834 aa10.69□□□□□ -0.7
GNE-206ENST00000543356 EARS2Q5JPH6 523 aaKnown RBP10.69□□□□□ -0.7
GNE-206ENST00000543356 RBM43Q6ZSC3 357 aaKnown RBP10.69□□□□□ -0.7
GNE-206ENST00000543356 ENGASEQ8NFI3 743 aa10.69□□□□□ -0.7
GNE-206ENST00000543356 MTMR8Q96EF0 704 aa10.69□□□□□ -0.7
GNE-206ENST00000543356 TEPSINQ96N21 525 aa10.69□□□□□ -0.7
GNE-206ENST00000543356 UBA5Q9GZZ9 404 aa10.69□□□□□ -0.7
GNE-206ENST00000543356 ZMYND12Q9H0C1 365 aa10.69□□□□□ -0.7
GNE-206ENST00000543356 GPCPD1Q9NPB8 672 aa10.69□□□□□ -0.7
GNE-206ENST00000543356 TRIM75PA6NK02 468 aa10.69□□□□□ -0.7
GNE-206ENST00000543356 CUTAO60888 179 aa10.69□□□□□ -0.7
GNE-206ENST00000543356 CMA1P23946 247 aa10.69□□□□□ -0.7
GNE-206ENST00000543356 TBC1D10BQ4KMP7 808 aaPredicted RBP10.69□□□□□ -0.7
GNE-206ENST00000543356 SAMD7Q7Z3H4 446 aa10.69□□□□□ -0.7
GNE-206ENST00000543356 CDAN1Q8IWY9 1227 aa10.69□□□□□ -0.7
GNE-206ENST00000543356 CNKSR2Q8WXI2 1034 aa10.69□□□□□ -0.7
GNE-206ENST00000543356 SYT17Q9BSW7 474 aa10.69□□□□□ -0.7
GNE-206ENST00000543356 TSPY26PQ9H489 355 aa10.69□□□□□ -0.7
GNE-206ENST00000543356 ARHGEF10LQ9HCE6 1279 aa10.69□□□□□ -0.7
GNE-206ENST00000543356 FAM237AA0A1B0GTK4 181 aa10.68□□□□□ -0.7
GNE-206ENST00000543356 FAM205CA6NFA0 338 aa10.68□□□□□ -0.7
GNE-206ENST00000543356 H7C1D1 291 aa10.68□□□□□ -0.7
GNE-206ENST00000543356 NAPAP54920 295 aa10.68□□□□□ -0.7
GNE-206ENST00000543356 SNW1Q13573 536 aaKnown RBP10.68□□□□□ -0.7
GNE-206ENST00000543356 HOMER1Q86YM7 354 aa10.68□□□□□ -0.7
GNE-206ENST00000543356 ADGRF4Q8IZF3 695 aa10.68□□□□□ -0.7
GNE-206ENST00000543356 IPO4Q8TEX9 1081 aaKnown RBP10.68□□□□□ -0.7
GNE-206ENST00000543356 JMJD4Q9H9V9 463 aa10.68□□□□□ -0.7
GNE-206ENST00000543356 GPRC5DQ9NZD1 345 aa10.68□□□□□ -0.7
GNE-206ENST00000543356 HACL1Q9UJ83 578 aa10.68□□□□□ -0.7
GNE-206ENST00000543356 PCDHB6Q9Y5E3 794 aa10.68□□□□□ -0.7
GNE-206ENST00000543356 PNMA6FA0A0J9YX94 578 aa10.68□□□□□ -0.7
GNE-206ENST00000543356 F5H6K3 240 aa10.68□□□□□ -0.7
GNE-206ENST00000543356 GNA11P29992 359 aa10.68□□□□□ -0.7
GNE-206ENST00000543356 CAP2P40123 477 aa10.68□□□□□ -0.7
GNE-206ENST00000543356 SLC1A4P43007 532 aa10.68□□□□□ -0.7
GNE-206ENST00000543356 KLRC3Q07444 240 aa10.68□□□□□ -0.7
GNE-206ENST00000543356 MAP3K11Q16584 847 aa10.68□□□□□ -0.7
GNE-206ENST00000543356 KCTD1Q719H9 257 aa10.68□□□□□ -0.7
GNE-206ENST00000543356 APOBEC3FQ8IUX4 373 aaKnown RBP10.68□□□□□ -0.7
GNE-206ENST00000543356 FMR1NBQ8N0W7 255 aaPredicted RBP10.68□□□□□ -0.7
GNE-206ENST00000543356 KRI1Q8N9T8 703 aaKnown RBP10.68□□□□□ -0.7
GNE-206ENST00000543356 FUCA2Q9BTY2 467 aa10.68□□□□□ -0.7
GNE-206ENST00000543356 TNMDQ9H2S6 317 aa10.68□□□□□ -0.7
GNE-206ENST00000543356 VAT1LQ9HCJ6 419 aa10.68□□□□□ -0.7
GNE-206ENST00000543356 C6orf50Q9HD87 102 aa10.68□□□□□ -0.7
GNE-206ENST00000543356 GINM1Q9NU53 330 aa10.68□□□□□ -0.7
GNE-206ENST00000543356 CTAGE5O15320 804 aa10.67□□□□□ -0.7
GNE-206ENST00000543356 NDUFB10O96000 172 aa10.67□□□□□ -0.7
GNE-206ENST00000543356 MARCKSP29966 332 aaPredicted RBP10.67□□□□□ -0.7
GNE-206ENST00000543356 TTC38Q5R3I4 469 aa10.67□□□□□ -0.7
GNE-206ENST00000543356 RESP18Q5W5W9 173 aa10.67□□□□□ -0.7
GNE-206ENST00000543356 TTBK2Q6IQ55 1244 aa10.67□□□□□ -0.7
GNE-206ENST00000543356 FBXO2Q9UK22 296 aaPredicted RBP10.67□□□□□ -0.7
GNE-206ENST00000543356 PCDHA6Q9UN73 950 aa10.67□□□□□ -0.7
GNE-206ENST00000543356 TMX2Q9Y320 296 aa10.67□□□□□ -0.7
GNE-206ENST00000543356 PCDHA8Q9Y5H6 950 aa10.67□□□□□ -0.7
GNE-206ENST00000543356 DOCK1Q14185 1865 aa10.67□□□□□ -0.7
GNE-206ENST00000543356 BAZ2BQ9UIF8 2168 aaKnown RBP10.67□□□□□ -0.7
GNE-206ENST00000543356 ZBTB5O15062 677 aa10.67□□□□□ -0.7
GNE-206ENST00000543356 ADAMTS3O15072 1205 aa10.67□□□□□ -0.7
GNE-206ENST00000543356 KINO60870 393 aaKnown RBP10.67□□□□□ -0.7
GNE-206ENST00000543356 PTPREP23469 700 aa10.67□□□□□ -0.7
GNE-206ENST00000543356 PIK3AP1Q6ZUJ8 805 aa10.67□□□□□ -0.7
GNE-206ENST00000543356 ZNF579Q8NAF0 562 aaKnown RBP10.67□□□□□ -0.7
GNE-206ENST00000543356 SH2D4AQ9H788 454 aa10.67□□□□□ -0.7
GNE-206ENST00000543356 ZHX1Q9UKY1 873 aaPredicted RBP10.67□□□□□ -0.7
GNE-206ENST00000543356 HPSEQ9Y251 543 aa10.67□□□□□ -0.7
GNE-206ENST00000543356 ASTN2O75129 1339 aaPredicted RBP10.66□□□□□ -0.7
GNE-206ENST00000543356 CCDC194A0A1B0GVG4 234 aa10.66□□□□□ -0.7
GNE-206ENST00000543356 A0A1W2PRG0 241 aa10.66□□□□□ -0.7
GNE-206ENST00000543356 SMCO2A6NFE2 343 aa10.66□□□□□ -0.7
GNE-206ENST00000543356 PHF20L1A8MW92 1017 aa10.66□□□□□ -0.7
GNE-206ENST00000543356 ASNSP08243 561 aa10.66□□□□□ -0.7
GNE-206ENST00000543356 XRCC6P12956 609 aaKnown RBP eCLIP10.66□□□□□ -0.7
GNE-206ENST00000543356 NDUFA8P51970 172 aa10.66□□□□□ -0.7
GNE-206ENST00000543356 NOM1Q5C9Z4 860 aaKnown RBP10.66□□□□□ -0.7
GNE-206ENST00000543356 SHC4Q6S5L8 630 aa10.66□□□□□ -0.7
GNE-206ENST00000543356 BTNL9Q6UXG8 535 aa10.66□□□□□ -0.7
GNE-206ENST00000543356 MIGA2Q7L4E1 593 aa10.66□□□□□ -0.7
GNE-206ENST00000543356 KRT25Q7Z3Z0 450 aa10.66□□□□□ -0.7
GNE-206ENST00000543356 GOPCQ9HD26 462 aa10.66□□□□□ -0.7
GNE-206ENST00000543356 SRPRBQ9Y5M8 271 aaKnown RBP10.66□□□□□ -0.7
GNE-206ENST00000543356 A0A1B0GVL5 298 aa10.66□□□□□ -0.7
GNE-206ENST00000543356 USP17L10C9JJH3 530 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms