RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 STXBP3O00186 592 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 SMARCA1P28370 1054 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 PRPHP41219 470 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 NOVP48745 357 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 ST5P78524 1137 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 GPSM2P81274 684 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 GRIK5Q16478 980 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 QSER1Q2KHR3 1735 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 FILIP1LQ4L180 1135 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 WWC2Q6AWC2 1192 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 SLF2Q8IX21 1173 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 SMAP1Q8IYB5 467 aaPredicted RBP7.41□□□□□ -1.22
PTPRO-208ENST00000542557 STAG2Q8N3U4 1231 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 CCDC12Q8WUD4 166 aaPredicted RBP7.41□□□□□ -1.22
PTPRO-208ENST00000542557 TGFBRAP1Q8WUH2 860 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 LIMA1Q9UHB6 759 aaKnown RBP7.41□□□□□ -1.22
PTPRO-208ENST00000542557 USP17L3A6NCW0 530 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 USP17L4A6NCW7 530 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 AKR1B15C9JRZ8 316 aaPredicted RBP7.41□□□□□ -1.22
PTPRO-208ENST00000542557 ADAMTS3O15072 1205 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 CYTH3O43739 400 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 ONECUT3O60422 494 aaPredicted RBP7.41□□□□□ -1.22
PTPRO-208ENST00000542557 FECHP22830 423 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 BTDP43251 543 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 ORC2Q13416 577 aaPredicted RBP7.41□□□□□ -1.22
PTPRO-208ENST00000542557 SLC35G1Q2M3R5 365 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 HSP90AA4PQ58FG1 418 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 ZNF658Q5TYW1 1059 aaPredicted RBP7.41□□□□□ -1.22
PTPRO-208ENST00000542557 TYW1BQ6NUM6 668 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 USP17L1Q7RTZ2 530 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 NEDD1Q8NHV4 660 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 TBC1D22AQ8WUA7 517 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 GPKOWQ92917 476 aaPredicted RBP eCLIP7.41□□□□□ -1.22
PTPRO-208ENST00000542557 CCDC51Q96ER9 411 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 RBM17Q96I25 401 aaKnown RBP7.41□□□□□ -1.22
PTPRO-208ENST00000542557 ZFP91Q96JP5 570 aaPredicted RBP7.41□□□□□ -1.22
PTPRO-208ENST00000542557 MTRQ99707 1265 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 TMEM47Q9BQJ4 181 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 MAGEF1Q9HAY2 307 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 DISC1Q9NRI5 854 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 DNAI1Q9UI46 699 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 GGA1Q9UJY5 639 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 PCDHA6Q9UN73 950 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 PCDHA8Q9Y5H6 950 aa7.41□□□□□ -1.22
PTPRO-208ENST00000542557 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.41□□□□□ -1.22
PTPRO-208ENST00000542557 BAZ2BQ9UIF8 2168 aaKnown RBP7.4□□□□□ -1.22
PTPRO-208ENST00000542557 MYH1P12882 1939 aa7.4□□□□□ -1.22
PTPRO-208ENST00000542557 LRRC10BA6NIK2 292 aa7.4□□□□□ -1.22
PTPRO-208ENST00000542557 UBAP1LF5GYI3 381 aa7.4□□□□□ -1.22
PTPRO-208ENST00000542557 UFL1O94874 794 aa7.4□□□□□ -1.22
PTPRO-208ENST00000542557 CASP1P29466 404 aa7.4□□□□□ -1.22
PTPRO-208ENST00000542557 GOLGA8FQ08AF8 430 aa7.4□□□□□ -1.22
PTPRO-208ENST00000542557 GOLGA8DPQ0D2H9 430 aa7.4□□□□□ -1.22
PTPRO-208ENST00000542557 PAK1Q13153 545 aa7.4□□□□□ -1.22
PTPRO-208ENST00000542557 KCNB1Q14721 858 aa7.4□□□□□ -1.22
PTPRO-208ENST00000542557 NAA30Q147X3 362 aaPredicted RBP7.4□□□□□ -1.22
PTPRO-208ENST00000542557 KLHL10Q6JEL2 608 aa7.4□□□□□ -1.22
PTPRO-208ENST00000542557 DTHD1Q6ZMT9 781 aa7.4□□□□□ -1.22
PTPRO-208ENST00000542557 MAPKAPK5Q8IW41 473 aa7.4□□□□□ -1.22
PTPRO-208ENST00000542557 GJD4Q96KN9 370 aaPredicted RBP7.4□□□□□ -1.22
PTPRO-208ENST00000542557 CCSER1Q9C0I3 900 aa7.4□□□□□ -1.22
PTPRO-208ENST00000542557 ZMYND12Q9H0C1 365 aa7.4□□□□□ -1.22
PTPRO-208ENST00000542557 CTNND2Q9UQB3 1225 aa7.4□□□□□ -1.22
PTPRO-208ENST00000542557 FLT1P17948 1338 aa7.4□□□□□ -1.22
PTPRO-208ENST00000542557 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.4□□□□□ -1.23
PTPRO-208ENST00000542557 hCG_1984214I3L0E3 225 aa7.4□□□□□ -1.23
PTPRO-208ENST00000542557 BBOX1O75936 387 aa7.4□□□□□ -1.23
PTPRO-208ENST00000542557 RPN1P04843 607 aaKnown RBP7.4□□□□□ -1.23
PTPRO-208ENST00000542557 GYS1P13807 737 aa7.4□□□□□ -1.23
PTPRO-208ENST00000542557 HOXA10P31260 410 aaPredicted RBP7.4□□□□□ -1.23
PTPRO-208ENST00000542557 STAT6P42226 847 aa7.4□□□□□ -1.23
PTPRO-208ENST00000542557 CDK8P49336 464 aa7.4□□□□□ -1.23
PTPRO-208ENST00000542557 RHBDL3P58872 404 aa7.4□□□□□ -1.23
PTPRO-208ENST00000542557 PTPN21Q16825 1174 aa7.4□□□□□ -1.23
PTPRO-208ENST00000542557 KRT25Q7Z3Z0 450 aa7.4□□□□□ -1.23
PTPRO-208ENST00000542557 TMC4Q7Z404 712 aa7.4□□□□□ -1.23
PTPRO-208ENST00000542557 CNGA4Q8IV77 575 aa7.4□□□□□ -1.23
PTPRO-208ENST00000542557 TEX11Q8IYF3 940 aa7.4□□□□□ -1.23
PTPRO-208ENST00000542557 ZNF713Q8N859 430 aaPredicted RBP7.4□□□□□ -1.23
PTPRO-208ENST00000542557 IGSF22Q8N9C0 903 aa7.4□□□□□ -1.23
PTPRO-208ENST00000542557 SLC44A5Q8NCS7 719 aa7.4□□□□□ -1.23
PTPRO-208ENST00000542557 EYA3Q99504 573 aa7.4□□□□□ -1.23
PTPRO-208ENST00000542557 CUEDC2Q9H467 287 aa7.4□□□□□ -1.23
PTPRO-208ENST00000542557 TEX33O43247 280 aa7.39□□□□□ -1.23
PTPRO-208ENST00000542557 MFAP3LO75121 409 aa7.39□□□□□ -1.23
PTPRO-208ENST00000542557 ADKP55263 362 aaKnown RBP7.39□□□□□ -1.23
PTPRO-208ENST00000542557 STX17P56962 302 aa7.39□□□□□ -1.23
PTPRO-208ENST00000542557 TRIM14Q14142 442 aa7.39□□□□□ -1.23
PTPRO-208ENST00000542557 ELF2Q15723 593 aa7.39□□□□□ -1.23
PTPRO-208ENST00000542557 SLC4A8Q2Y0W8 1093 aa7.39□□□□□ -1.23
PTPRO-208ENST00000542557 HEATR3Q7Z4Q2 680 aa7.39□□□□□ -1.23
PTPRO-208ENST00000542557 SLC51AQ86UW1 340 aa7.39□□□□□ -1.23
PTPRO-208ENST00000542557 PPFIBP1Q86W92 1011 aa7.39□□□□□ -1.23
PTPRO-208ENST00000542557 SMYD4Q8IYR2 804 aaPredicted RBP7.39□□□□□ -1.23
PTPRO-208ENST00000542557 ANKRD20A12PQ8NF67 263 aa7.39□□□□□ -1.23
PTPRO-208ENST00000542557 AK8Q96MA6 479 aa7.39□□□□□ -1.23
PTPRO-208ENST00000542557 BLZF1Q9H2G9 400 aa7.39□□□□□ -1.23
PTPRO-208ENST00000542557 LRRC4BQ9NT99 713 aa7.39□□□□□ -1.23
PTPRO-208ENST00000542557 OGFRQ9NZT2 677 aa7.39□□□□□ -1.23
PTPRO-208ENST00000542557 DDX41Q9UJV9 622 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 1585.6 ms