RNA–Protein interactions for RNA: ENST00000541774.5

ERBB2-204, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene ERBB2, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-204ENST00000541774 MYSM1Q5VVJ2 828 aa12.15□□□□□ -0.46
ERBB2-204ENST00000541774 ARMC3Q5W041 872 aa12.15□□□□□ -0.46
ERBB2-204ENST00000541774 TMEM165Q9HC07 324 aa12.15□□□□□ -0.46
ERBB2-204ENST00000541774 ABCA6Q8N139 1617 aa12.15□□□□□ -0.46
ERBB2-204ENST00000541774 CFAP73A6NFT4 308 aa12.15□□□□□ -0.46
ERBB2-204ENST00000541774 CMA1P23946 247 aa12.15□□□□□ -0.46
ERBB2-204ENST00000541774 THEMIS2Q5TEJ8 643 aa12.15□□□□□ -0.46
ERBB2-204ENST00000541774 FYB2Q5VWT5 728 aa12.15□□□□□ -0.46
ERBB2-204ENST00000541774 XAGE3Q8WTP9 111 aa12.15□□□□□ -0.46
ERBB2-204ENST00000541774 PRM3Q9NNZ6 103 aa12.15□□□□□ -0.46
ERBB2-204ENST00000541774 TSKSQ9UJT2 592 aa12.15□□□□□ -0.46
ERBB2-204ENST00000541774 NFU1Q9UMS0 254 aa12.15□□□□□ -0.46
ERBB2-204ENST00000541774 TRPM1Q7Z4N2 1603 aa12.15□□□□□ -0.47
ERBB2-204ENST00000541774 A0A087WZG4 1122 aa12.15□□□□□ -0.47
ERBB2-204ENST00000541774 CHGBP05060 677 aa12.15□□□□□ -0.47
ERBB2-204ENST00000541774 CXCR5P32302 372 aa12.15□□□□□ -0.47
ERBB2-204ENST00000541774 MCMDC2Q4G0Z9 681 aa12.15□□□□□ -0.47
ERBB2-204ENST00000541774 TMEM154Q6P9G4 183 aa12.15□□□□□ -0.47
ERBB2-204ENST00000541774 IL17REQ8NFR9 667 aa12.15□□□□□ -0.47
ERBB2-204ENST00000541774 SNRNP27Q8WVK2 155 aaKnown RBP12.15□□□□□ -0.47
ERBB2-204ENST00000541774 KRT12Q99456 494 aa12.15□□□□□ -0.47
ERBB2-204ENST00000541774 ARHGAP31Q2M1Z3 1444 aa12.14□□□□□ -0.47
ERBB2-204ENST00000541774 MAP3K4Q9Y6R4 1608 aa12.14□□□□□ -0.47
ERBB2-204ENST00000541774 A0A1W2PQ27 194 aa12.14□□□□□ -0.47
ERBB2-204ENST00000541774 A0A1W2PQ64 194 aa12.14□□□□□ -0.47
ERBB2-204ENST00000541774 A0A1W2PQD8 194 aa12.14□□□□□ -0.47
ERBB2-204ENST00000541774 DHX40Q8IX18 779 aaKnown RBP12.14□□□□□ -0.47
ERBB2-204ENST00000541774 PNKPQ96T60 521 aa12.14□□□□□ -0.47
ERBB2-204ENST00000541774 HOMER2Q9NSB8 354 aa12.14□□□□□ -0.47
ERBB2-204ENST00000541774 KDM5AP29375 1690 aaKnown RBP12.14□□□□□ -0.47
ERBB2-204ENST00000541774 STAMBPO95630 424 aa12.14□□□□□ -0.47
ERBB2-204ENST00000541774 ZFXP17010 805 aaPredicted RBP12.14□□□□□ -0.47
ERBB2-204ENST00000541774 NAA35Q5VZE5 725 aa12.14□□□□□ -0.47
ERBB2-204ENST00000541774 ANKRD13CQ8N6S4 541 aa12.14□□□□□ -0.47
ERBB2-204ENST00000541774 CFAP61Q8NHU2 1237 aa12.14□□□□□ -0.47
ERBB2-204ENST00000541774 TRIM75PA6NK02 468 aa12.14□□□□□ -0.47
ERBB2-204ENST00000541774 IFIT1P09914 478 aaKnown RBP12.14□□□□□ -0.47
ERBB2-204ENST00000541774 STAT6P42226 847 aa12.14□□□□□ -0.47
ERBB2-204ENST00000541774 CCNHP51946 323 aaPredicted RBP12.14□□□□□ -0.47
ERBB2-204ENST00000541774 RBM5P52756 815 aaKnown RBP eCLIP12.14□□□□□ -0.479e-8■■■□□ 16.8
ERBB2-204ENST00000541774 ANKRD20A3Q5VUR7 823 aa12.14□□□□□ -0.47
ERBB2-204ENST00000541774 UNC5CLQ8IV45 518 aa12.14□□□□□ -0.47
ERBB2-204ENST00000541774 REXO1L1PQ8IX06 675 aa12.14□□□□□ -0.47
ERBB2-204ENST00000541774 PLEKHF1Q96S99 279 aa12.14□□□□□ -0.47
ERBB2-204ENST00000541774 VCPKMTQ9H867 229 aa12.14□□□□□ -0.47
ERBB2-204ENST00000541774 VWA3AA6NCI4 1184 aa12.13□□□□□ -0.47
ERBB2-204ENST00000541774 TTF1Q15361 905 aaPredicted RBP12.13□□□□□ -0.47
ERBB2-204ENST00000541774 SLC44A4Q53GD3 710 aa12.13□□□□□ -0.47
ERBB2-204ENST00000541774 ARHGAP18Q8N392 663 aa12.13□□□□□ -0.47
ERBB2-204ENST00000541774 NACAP1Q9BZK3 213 aa12.13□□□□□ -0.47
ERBB2-204ENST00000541774 DLGAP2Q9P1A6 1054 aa12.13□□□□□ -0.47
ERBB2-204ENST00000541774 FAM135BQ49AJ0 1406 aa12.13□□□□□ -0.47
ERBB2-204ENST00000541774 PNMA6EA0A0J9YXQ4 647 aa12.13□□□□□ -0.47
ERBB2-204ENST00000541774 CCDC169A6NNP5 214 aa12.13□□□□□ -0.47
ERBB2-204ENST00000541774 ZBTB43O43298 467 aa12.13□□□□□ -0.47
ERBB2-204ENST00000541774 MRPS35P82673 323 aaKnown RBP12.13□□□□□ -0.47
ERBB2-204ENST00000541774 RPS6KA1Q15418 735 aa12.13□□□□□ -0.47
ERBB2-204ENST00000541774 AKAP4Q5JQC9 854 aa12.13□□□□□ -0.47
ERBB2-204ENST00000541774 TYW1BQ6NUM6 668 aa12.13□□□□□ -0.47
ERBB2-204ENST00000541774 ARHGEF25Q86VW2 580 aa12.13□□□□□ -0.47
ERBB2-204ENST00000541774 VPS37DQ86XT2 251 aa12.13□□□□□ -0.47
ERBB2-204ENST00000541774 ST13P4Q8IZP2 240 aaPredicted RBP12.13□□□□□ -0.47
ERBB2-204ENST00000541774 PPP1R14CQ8TAE6 165 aa12.13□□□□□ -0.47
ERBB2-204ENST00000541774 ITFG2Q969R8 447 aa12.13□□□□□ -0.47
ERBB2-204ENST00000541774 PANX2Q96RD6 677 aa12.13□□□□□ -0.47
ERBB2-204ENST00000541774 DPH5Q9H2P9 285 aa12.13□□□□□ -0.47
ERBB2-204ENST00000541774 EXOC1Q9NV70 894 aa12.13□□□□□ -0.47
ERBB2-204ENST00000541774 ZFATQ9P243 1243 aa12.13□□□□□ -0.47
ERBB2-204ENST00000541774 LMTK3Q96Q04 1460 aa12.13□□□□□ -0.47
ERBB2-204ENST00000541774 MAP3K7O43318 606 aa12.13□□□□□ -0.47
ERBB2-204ENST00000541774 PRC1O43663 620 aa12.13□□□□□ -0.47
ERBB2-204ENST00000541774 TMEM67Q5HYA8 995 aa12.13□□□□□ -0.47
ERBB2-204ENST00000541774 TRIM74Q86UV6 250 aa12.13□□□□□ -0.47
ERBB2-204ENST00000541774 TRIM73Q86UV7 250 aa12.13□□□□□ -0.47
ERBB2-204ENST00000541774 KSR1Q8IVT5 923 aa12.13□□□□□ -0.47
ERBB2-204ENST00000541774 SCYL3Q8IZE3 742 aa12.13□□□□□ -0.47
ERBB2-204ENST00000541774 NOC4LQ9BVI4 516 aaKnown RBP12.13□□□□□ -0.47
ERBB2-204ENST00000541774 PA2G4Q9UQ80 394 aaKnown RBP12.13□□□□□ -0.47
ERBB2-204ENST00000541774 ADGRG1Q9Y653 693 aa12.13□□□□□ -0.47
ERBB2-204ENST00000541774 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.13□□□□□ -0.47
ERBB2-204ENST00000541774 LRRIQ3A6PVS8 624 aaPredicted RBP12.13□□□□□ -0.47
ERBB2-204ENST00000541774 G3V3G9 751 aa12.13□□□□□ -0.47
ERBB2-204ENST00000541774 MDH1P40925 334 aaKnown RBP12.13□□□□□ -0.47
ERBB2-204ENST00000541774 CETN2P41208 172 aa12.13□□□□□ -0.47
ERBB2-204ENST00000541774 MSH2P43246 934 aa12.13□□□□□ -0.47
ERBB2-204ENST00000541774 DCAF8Q5TAQ9 597 aa12.13□□□□□ -0.47
ERBB2-204ENST00000541774 HIC2Q96JB3 615 aa12.13□□□□□ -0.47
ERBB2-204ENST00000541774 NUP58Q9BVL2 599 aa12.13□□□□□ -0.47
ERBB2-204ENST00000541774 CNOT10Q9H9A5 744 aaKnown RBP12.13□□□□□ -0.47
ERBB2-204ENST00000541774 CNNM1Q9NRU3 951 aa12.13□□□□□ -0.47
ERBB2-204ENST00000541774 BSDC1Q9NW68 430 aaPredicted RBP12.13□□□□□ -0.47
ERBB2-204ENST00000541774 SERTAD1Q9UHV2 236 aa12.13□□□□□ -0.47
ERBB2-204ENST00000541774 PAK1Q13153 545 aa12.12□□□□□ -0.47
ERBB2-204ENST00000541774 PLCB4Q15147 1175 aa12.12□□□□□ -0.47
ERBB2-204ENST00000541774 HS2ST1Q7LGA3 356 aa12.12□□□□□ -0.47
ERBB2-204ENST00000541774 TRIM42Q8IWZ5 723 aa12.12□□□□□ -0.47
ERBB2-204ENST00000541774 PLAAQ9Y263 795 aa12.12□□□□□ -0.47
ERBB2-204ENST00000541774 NLRP1Q9C000 1473 aa12.12□□□□□ -0.47
ERBB2-204ENST00000541774 NOA1Q8NC60 698 aaKnown RBP12.12□□□□□ -0.47
ERBB2-204ENST00000541774 SMC1BQ8NDV3 1235 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms