RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 RAG1P15918 1043 aa15.7■□□□□ 0.1
SCARB1-207ENST00000541661 FAAP100Q0VG06 881 aa15.7■□□□□ 0.1
SCARB1-207ENST00000541661 CCSAPQ6IQ19 270 aaPredicted RBP15.7■□□□□ 0.1
SCARB1-207ENST00000541661 GIMAP6Q6P9H5 292 aa15.7■□□□□ 0.1
SCARB1-207ENST00000541661 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.7■□□□□ 0.11e-7■□□□□ 8.9
SCARB1-207ENST00000541661 MYLIPQ8WY64 445 aa15.7■□□□□ 0.1
SCARB1-207ENST00000541661 STRBPQ96SI9 672 aaKnown RBP15.7■□□□□ 0.1
SCARB1-207ENST00000541661 SLF1Q9BQI6 1058 aa15.7■□□□□ 0.1
SCARB1-207ENST00000541661 TEX13BQ9BXU2 312 aa15.7■□□□□ 0.1
SCARB1-207ENST00000541661 CHMP4BQ9H444 224 aaKnown RBP15.7■□□□□ 0.1
SCARB1-207ENST00000541661 FAM184BQ9ULE4 1060 aa15.7■□□□□ 0.1
SCARB1-207ENST00000541661 COG6Q9Y2V7 657 aa15.7■□□□□ 0.1
SCARB1-207ENST00000541661 MOXD2PA6NHM9 499 aa15.69■□□□□ 0.1
SCARB1-207ENST00000541661 PQBP1O60828 265 aaKnown RBP15.69■□□□□ 0.1
SCARB1-207ENST00000541661 SNAI1O95863 264 aaPredicted RBP15.69■□□□□ 0.1
SCARB1-207ENST00000541661 RASA1P20936 1047 aa15.69■□□□□ 0.1
SCARB1-207ENST00000541661 ACLYP53396 1101 aa15.69■□□□□ 0.1
SCARB1-207ENST00000541661 FPGSQ05932 587 aa15.69■□□□□ 0.1
SCARB1-207ENST00000541661 ZNF467Q7Z7K2 595 aaPredicted RBP15.69■□□□□ 0.1
SCARB1-207ENST00000541661 PRPF38AQ8NAV1 312 aaKnown RBP15.69■□□□□ 0.1
SCARB1-207ENST00000541661 NUP133Q8WUM0 1156 aa15.69■□□□□ 0.1
SCARB1-207ENST00000541661 RNPC3Q96LT9 517 aaKnown RBP15.69■□□□□ 0.1
SCARB1-207ENST00000541661 BCL11AQ9H165 835 aa15.69■□□□□ 0.1
SCARB1-207ENST00000541661 TMEM39AQ9NV64 488 aa15.69■□□□□ 0.1
SCARB1-207ENST00000541661 SYNRGQ9UMZ2 1314 aa15.68■□□□□ 0.1
SCARB1-207ENST00000541661 GSG1L2A8MUP6 293 aa15.68■□□□□ 0.1
SCARB1-207ENST00000541661 DCDC2CA8MYV0 355 aa15.68■□□□□ 0.1
SCARB1-207ENST00000541661 F5H6K3 240 aa15.68■□□□□ 0.1
SCARB1-207ENST00000541661 RAD21O60216 631 aa15.68■□□□□ 0.1
SCARB1-207ENST00000541661 DUSP11O75319 330 aaKnown RBP15.68■□□□□ 0.1
SCARB1-207ENST00000541661 KLRC3Q07444 240 aa15.68■□□□□ 0.1
SCARB1-207ENST00000541661 KCNA10Q16322 511 aa15.68■□□□□ 0.1
SCARB1-207ENST00000541661 SNRNP48Q6IEG0 339 aaKnown RBP15.68■□□□□ 0.1
SCARB1-207ENST00000541661 MKL1Q969V6 931 aa15.68■□□□□ 0.1
SCARB1-207ENST00000541661 LENG1Q96BZ8 264 aaPredicted RBP15.68■□□□□ 0.1
SCARB1-207ENST00000541661 DDX11Q96FC9 970 aa15.68■□□□□ 0.1
SCARB1-207ENST00000541661 NUP88Q99567 741 aaPredicted RBP15.68■□□□□ 0.1
SCARB1-207ENST00000541661 LRRCC1Q9C099 1032 aa15.68■□□□□ 0.1
SCARB1-207ENST00000541661 STARD7Q9NQZ5 370 aa15.68■□□□□ 0.1
SCARB1-207ENST00000541661 RIPK3Q9Y572 518 aa15.68■□□□□ 0.1
SCARB1-207ENST00000541661 MYH4Q9Y623 1939 aa15.68■□□□□ 0.1
SCARB1-207ENST00000541661 IGKV6D-41A0A0C4DH26 115 aa15.67■□□□□ 0.1
SCARB1-207ENST00000541661 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.67■□□□□ 0.1
SCARB1-207ENST00000541661 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.67■□□□□ 0.1
SCARB1-207ENST00000541661 NDUFB10O96000 172 aa15.67■□□□□ 0.1
SCARB1-207ENST00000541661 TIMP1P01033 207 aa15.67■□□□□ 0.1
SCARB1-207ENST00000541661 FOSL2P15408 326 aa15.67■□□□□ 0.1
SCARB1-207ENST00000541661 CST5P28325 142 aaPredicted RBP15.67■□□□□ 0.1
SCARB1-207ENST00000541661 CDK7P50613 346 aa15.67■□□□□ 0.1
SCARB1-207ENST00000541661 MKNK2Q9HBH9 465 aa15.67■□□□□ 0.1
SCARB1-207ENST00000541661 ELP1O95163 1332 aa15.67■□□□□ 0.1
SCARB1-207ENST00000541661 ZBED4O75132 1171 aa15.66■□□□□ 0.1
SCARB1-207ENST00000541661 MIER1Q8N108 512 aa15.66■□□□□ 0.1
SCARB1-207ENST00000541661 TBX21Q9UL17 535 aa15.66■□□□□ 0.1
SCARB1-207ENST00000541661 SYNPO2Q9UMS6 1093 aa15.66■□□□□ 0.1
SCARB1-207ENST00000541661 MROH7Q68CQ1 1323 aa15.66■□□□□ 0.1
SCARB1-207ENST00000541661 ACVR2BQ13705 512 aa15.65■□□□□ 0.1
SCARB1-207ENST00000541661 MFSD5Q6N075 450 aa15.65■□□□□ 0.1
SCARB1-207ENST00000541661 KBTBD3Q8NAB2 608 aa15.65■□□□□ 0.1
SCARB1-207ENST00000541661 PCSK9Q8NBP7 692 aaKnown RBP15.65■□□□□ 0.1
SCARB1-207ENST00000541661 OSBP2Q969R2 916 aa15.65■□□□□ 0.1
SCARB1-207ENST00000541661 UPF3AQ9H1J1 476 aaKnown RBP15.65■□□□□ 0.1
SCARB1-207ENST00000541661 ABHD16BQ9H3Z7 469 aa15.65■□□□□ 0.1
SCARB1-207ENST00000541661 SLC38A10Q9HBR0 1119 aa15.65■□□□□ 0.1
SCARB1-207ENST00000541661 ECHDC1Q9NTX5 307 aa15.65■□□□□ 0.1
SCARB1-207ENST00000541661 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.65■□□□□ 0.1
SCARB1-207ENST00000541661 CLIP2Q9UDT6 1046 aa15.65■□□□□ 0.1
SCARB1-207ENST00000541661 FBXO40Q9UH90 709 aa15.65■□□□□ 0.1
SCARB1-207ENST00000541661 FEM1BQ9UK73 627 aa15.65■□□□□ 0.1
SCARB1-207ENST00000541661 ZHX1Q9UKY1 873 aaPredicted RBP15.65■□□□□ 0.1
SCARB1-207ENST00000541661 MCM3APO60318 1980 aa15.65■□□□□ 0.1
SCARB1-207ENST00000541661 MYADML2A6NDP7 307 aa15.64■□□□□ 0.09
SCARB1-207ENST00000541661 MINDY4BA8MYZ0 360 aa15.64■□□□□ 0.09
SCARB1-207ENST00000541661 SMARCA5O60264 1052 aaPredicted RBP15.64■□□□□ 0.09
SCARB1-207ENST00000541661 DNAJB2P25686 324 aa15.64■□□□□ 0.09
SCARB1-207ENST00000541661 OAZ1P54368 228 aa15.64■□□□□ 0.09
SCARB1-207ENST00000541661 GJA9P57773 515 aa15.64■□□□□ 0.09
SCARB1-207ENST00000541661 NKX3-2P78367 333 aa15.64■□□□□ 0.09
SCARB1-207ENST00000541661 GRIN2CQ14957 1233 aa15.64■□□□□ 0.09
SCARB1-207ENST00000541661 CPXCR1Q8N123 301 aa15.64■□□□□ 0.09
SCARB1-207ENST00000541661 CHST13Q8NET6 341 aa15.64■□□□□ 0.09
SCARB1-207ENST00000541661 APPBP2Q92624 585 aa15.64■□□□□ 0.09
SCARB1-207ENST00000541661 FGD4Q96M96 766 aa15.64■□□□□ 0.09
SCARB1-207ENST00000541661 GLT1D1Q96MS3 346 aa15.64■□□□□ 0.09
SCARB1-207ENST00000541661 ZNF287Q9HBT7 754 aa15.64■□□□□ 0.09
SCARB1-207ENST00000541661 MTMR4Q9NYA4 1195 aa15.64■□□□□ 0.09
SCARB1-207ENST00000541661 RNF113AO15541 343 aaKnown RBP15.63■□□□□ 0.09
SCARB1-207ENST00000541661 ADCY6O43306 1168 aa15.63■□□□□ 0.09
SCARB1-207ENST00000541661 ASGR1P07306 291 aa15.63■□□□□ 0.09
SCARB1-207ENST00000541661 GNAT2P19087 354 aa15.63■□□□□ 0.09
SCARB1-207ENST00000541661 IRX5P78411 483 aaPredicted RBP15.63■□□□□ 0.09
SCARB1-207ENST00000541661 PPIGQ13427 754 aaKnown RBP eCLIP15.63■□□□□ 0.091e-19■□□□□ 8.1
SCARB1-207ENST00000541661 CCDC144BQ3MJ40 725 aa15.63■□□□□ 0.09
SCARB1-207ENST00000541661 RASIP1Q5U651 963 aa15.63■□□□□ 0.09
SCARB1-207ENST00000541661 C16orf59Q7L2K0 433 aa15.63■□□□□ 0.09
SCARB1-207ENST00000541661 ZNF444Q8N0Y2 327 aaPredicted RBP15.63■□□□□ 0.09
SCARB1-207ENST00000541661 STK11IPQ8N1F8 1099 aa15.63■□□□□ 0.09
SCARB1-207ENST00000541661 ANKRD35Q8N283 1001 aa15.63■□□□□ 0.09
SCARB1-207ENST00000541661 GMCL1P1Q8NEA9 526 aa15.63■□□□□ 0.09
SCARB1-207ENST00000541661 SYMPKQ92797 1274 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms