RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 POLLQ9UGP5 575 aa13.06□□□□□ -0.32
C11orf54-214ENST00000540113 MAD2L2Q9UI95 211 aa13.06□□□□□ -0.32
C11orf54-214ENST00000540113 GGA1Q9UJY5 639 aa13.06□□□□□ -0.32
C11orf54-214ENST00000540113 CYTH3O43739 400 aa13.05□□□□□ -0.32
C11orf54-214ENST00000540113 MYO1BO43795 1136 aa13.05□□□□□ -0.32
C11orf54-214ENST00000540113 BAG3O95817 575 aa13.05□□□□□ -0.32
C11orf54-214ENST00000540113 ATP2B4P23634 1241 aa13.05□□□□□ -0.32
C11orf54-214ENST00000540113 BTDP43251 543 aa13.05□□□□□ -0.32
C11orf54-214ENST00000540113 PDXDC2PQ6P474 469 aa13.05□□□□□ -0.32
C11orf54-214ENST00000540113 DGKHQ86XP1 1220 aa13.05□□□□□ -0.32
C11orf54-214ENST00000540113 GDAQ9Y2T3 454 aa13.05□□□□□ -0.32
C11orf54-214ENST00000540113 POLRMTO00411 1230 aaKnown RBP13.05□□□□□ -0.32
C11orf54-214ENST00000540113 RASA1P20936 1047 aa13.05□□□□□ -0.32
C11orf54-214ENST00000540113 HOXA10P31260 410 aaPredicted RBP13.05□□□□□ -0.32
C11orf54-214ENST00000540113 GRM4Q14833 912 aa13.05□□□□□ -0.32
C11orf54-214ENST00000540113 INF2Q27J81 1249 aa13.05□□□□□ -0.32
C11orf54-214ENST00000540113 WWC2Q6AWC2 1192 aa13.05□□□□□ -0.32
C11orf54-214ENST00000540113 IGSF22Q8N9C0 903 aa13.05□□□□□ -0.32
C11orf54-214ENST00000540113 ZNF397Q8NF99 534 aaPredicted RBP13.05□□□□□ -0.32
C11orf54-214ENST00000540113 TMEM60Q9H2L4 133 aa13.05□□□□□ -0.32
C11orf54-214ENST00000540113 FOCADQ5VW36 1801 aa13.05□□□□□ -0.32
C11orf54-214ENST00000540113 MYH1P12882 1939 aa13.05□□□□□ -0.32
C11orf54-214ENST00000540113 KIF5BP33176 963 aa13.04□□□□□ -0.32
C11orf54-214ENST00000540113 GNG11P61952 73 aa13.04□□□□□ -0.32
C11orf54-214ENST00000540113 SMAP1Q8IYB5 467 aaPredicted RBP13.04□□□□□ -0.32
C11orf54-214ENST00000540113 C4orf32Q8N8J7 132 aa13.04□□□□□ -0.32
C11orf54-214ENST00000540113 IQUBQ8NA54 791 aa13.04□□□□□ -0.32
C11orf54-214ENST00000540113 TBC1D16Q8TBP0 767 aa13.04□□□□□ -0.32
C11orf54-214ENST00000540113 GSDMAQ96QA5 445 aa13.04□□□□□ -0.32
C11orf54-214ENST00000540113 CARD6Q9BX69 1037 aa13.04□□□□□ -0.32
C11orf54-214ENST00000540113 VPS16Q9H269 839 aa13.04□□□□□ -0.32
C11orf54-214ENST00000540113 MRPL44Q9H9J2 332 aaKnown RBP13.04□□□□□ -0.32
C11orf54-214ENST00000540113 GPR75-ASB3A0A0A6YYF3 556 aa13.04□□□□□ -0.32
C11orf54-214ENST00000540113 ZSCAN12O43309 604 aa13.04□□□□□ -0.32
C11orf54-214ENST00000540113 BMP15O95972 392 aa13.04□□□□□ -0.32
C11orf54-214ENST00000540113 LDHCP07864 332 aa13.04□□□□□ -0.32
C11orf54-214ENST00000540113 ZSCAN20P17040 1043 aaPredicted RBP13.04□□□□□ -0.32
C11orf54-214ENST00000540113 DHX8Q14562 1220 aaKnown RBP13.04□□□□□ -0.32
C11orf54-214ENST00000540113 CDKAL1Q5VV42 579 aa13.04□□□□□ -0.32
C11orf54-214ENST00000540113 ZNF444Q8N0Y2 327 aaPredicted RBP13.04□□□□□ -0.32
C11orf54-214ENST00000540113 TMEM47Q9BQJ4 181 aa13.04□□□□□ -0.32
C11orf54-214ENST00000540113 VAT1LQ9HCJ6 419 aa13.04□□□□□ -0.32
C11orf54-214ENST00000540113 LZTFL1Q9NQ48 299 aa13.04□□□□□ -0.32
C11orf54-214ENST00000540113 ZNF446Q9NWS9 450 aa13.04□□□□□ -0.32
C11orf54-214ENST00000540113 ADD3Q9UEY8 706 aaKnown RBP13.04□□□□□ -0.32
C11orf54-214ENST00000540113 PCDHA6Q9UN73 950 aa13.04□□□□□ -0.32
C11orf54-214ENST00000540113 PCDHA4Q9UN74 947 aa13.04□□□□□ -0.32
C11orf54-214ENST00000540113 PCDHA8Q9Y5H6 950 aa13.04□□□□□ -0.32
C11orf54-214ENST00000540113 PARP3Q9Y6F1 533 aa13.04□□□□□ -0.32
C11orf54-214ENST00000540113 AKR1B15C9JRZ8 316 aaPredicted RBP13.03□□□□□ -0.32
C11orf54-214ENST00000540113 PLSCR1O15162 318 aa13.03□□□□□ -0.32
C11orf54-214ENST00000540113 STX10O60499 249 aa13.03□□□□□ -0.32
C11orf54-214ENST00000540113 CASP14P31944 242 aa13.03□□□□□ -0.32
C11orf54-214ENST00000540113 RHBDL3P58872 404 aa13.03□□□□□ -0.32
C11orf54-214ENST00000540113 RAD9BQ6WBX8 426 aa13.03□□□□□ -0.32
C11orf54-214ENST00000540113 PROM2Q8N271 834 aa13.03□□□□□ -0.32
C11orf54-214ENST00000540113 CCDC34Q96HJ3 373 aa13.03□□□□□ -0.32
C11orf54-214ENST00000540113 NOL10Q9BSC4 688 aaKnown RBP13.03□□□□□ -0.32
C11orf54-214ENST00000540113 TCP11L1Q9NUJ3 509 aa13.03□□□□□ -0.32
C11orf54-214ENST00000540113 TAB2Q9NYJ8 693 aa13.03□□□□□ -0.32
C11orf54-214ENST00000540113 DDX41Q9UJV9 622 aaKnown RBP13.03□□□□□ -0.32
C11orf54-214ENST00000540113 PHLPP2Q6ZVD8 1323 aa13.03□□□□□ -0.32
C11orf54-214ENST00000540113 KLRG2A4D1S0 409 aaPredicted RBP13.03□□□□□ -0.32
C11orf54-214ENST00000540113 TRIM49BA6NDI0 452 aa13.03□□□□□ -0.32
C11orf54-214ENST00000540113 RNF225M0QZC1 329 aaPredicted RBP13.03□□□□□ -0.32
C11orf54-214ENST00000540113 CCP110O43303 1012 aa13.03□□□□□ -0.32
C11orf54-214ENST00000540113 BBOX1O75936 387 aa13.03□□□□□ -0.32
C11orf54-214ENST00000540113 TXNRD1Q16881 649 aa13.03□□□□□ -0.32
C11orf54-214ENST00000540113 ARHGAP29Q52LW3 1261 aa13.03□□□□□ -0.32
C11orf54-214ENST00000540113 MFSD14BQ5SR56 506 aa13.03□□□□□ -0.32
C11orf54-214ENST00000540113 TEX11Q8IYF3 940 aa13.03□□□□□ -0.32
C11orf54-214ENST00000540113 RASSF8Q8NHQ8 419 aa13.03□□□□□ -0.32
C11orf54-214ENST00000540113 EEF2KMTQ96G04 330 aa13.03□□□□□ -0.32
C11orf54-214ENST00000540113 OGFRQ9NZT2 677 aa13.03□□□□□ -0.32
C11orf54-214ENST00000540113 FLT1P17948 1338 aa13.03□□□□□ -0.32
C11orf54-214ENST00000540113 CCDC194A0A1B0GVG4 234 aa13.02□□□□□ -0.32
C11orf54-214ENST00000540113 ATXN8OSP0DMR3 200 aa13.02□□□□□ -0.32
C11orf54-214ENST00000540113 STAT6P42226 847 aa13.02□□□□□ -0.32
C11orf54-214ENST00000540113 FXR1P51114 621 aaKnown RBP eCLIP13.02□□□□□ -0.32
C11orf54-214ENST00000540113 KRT31Q15323 416 aa13.02□□□□□ -0.32
C11orf54-214ENST00000540113 PPFIBP1Q86W92 1011 aa13.02□□□□□ -0.32
C11orf54-214ENST00000540113 LRRC15Q8TF66 581 aa13.02□□□□□ -0.32
C11orf54-214ENST00000540113 CRAMP1Q96RY5 1269 aa13.02□□□□□ -0.32
C11orf54-214ENST00000540113 RPN1P04843 607 aaKnown RBP13.02□□□□□ -0.33
C11orf54-214ENST00000540113 CASQ1P31415 396 aa13.02□□□□□ -0.33
C11orf54-214ENST00000540113 PRCPP42785 496 aa13.02□□□□□ -0.33
C11orf54-214ENST00000540113 CDK8P49336 464 aa13.02□□□□□ -0.33
C11orf54-214ENST00000540113 NT5C2P49902 561 aa13.02□□□□□ -0.33
C11orf54-214ENST00000540113 USP17L2Q6R6M4 530 aa13.02□□□□□ -0.33
C11orf54-214ENST00000540113 NELFBQ8WX92 580 aa13.02□□□□□ -0.33
C11orf54-214ENST00000540113 GAKO14976 1311 aa13.02□□□□□ -0.33
C11orf54-214ENST00000540113 ADAMTSL1Q8N6G6 1762 aa13.01□□□□□ -0.33
C11orf54-214ENST00000540113 M0R2N6 131 aa13.01□□□□□ -0.33
C11orf54-214ENST00000540113 STXBP3O00186 592 aa13.01□□□□□ -0.33
C11orf54-214ENST00000540113 GTPBP6O43824 516 aaPredicted RBP13.01□□□□□ -0.33
C11orf54-214ENST00000540113 ABL1P00519 1130 aa13.01□□□□□ -0.33
C11orf54-214ENST00000540113 CALML3P27482 149 aa13.01□□□□□ -0.33
C11orf54-214ENST00000540113 PBX1P40424 430 aa13.01□□□□□ -0.33
C11orf54-214ENST00000540113 C16orf86Q6ZW13 317 aa13.01□□□□□ -0.33
C11orf54-214ENST00000540113 FCHSD1Q86WN1 690 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms