RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 SYMPKQ92797 1274 aaKnown RBP20.22■□□□□ 0.83
RAB40C-203ENST00000535977 PAGE5Q96GU1 130 aa20.22■□□□□ 0.83
RAB40C-203ENST00000535977 WDR24Q96S15 920 aa20.22■□□□□ 0.83
RAB40C-203ENST00000535977 TFCP2L1Q9NZI6 479 aa20.22■□□□□ 0.83
RAB40C-203ENST00000535977 PRDX5P30044 214 aa20.22■□□□□ 0.83
RAB40C-203ENST00000535977 FMR1Q06787 632 aaKnown RBP eCLIP20.22■□□□□ 0.83
RAB40C-203ENST00000535977 USP49Q70CQ1 688 aa20.22■□□□□ 0.83
RAB40C-203ENST00000535977 AMOTL1Q8IY63 956 aa20.22■□□□□ 0.83
RAB40C-203ENST00000535977 CTAGE1Q96RT6 745 aa20.22■□□□□ 0.83
RAB40C-203ENST00000535977 PLEKHA4Q9H4M7 779 aa20.22■□□□□ 0.83
RAB40C-203ENST00000535977 RGS17Q9UGC6 210 aaPredicted RBP20.22■□□□□ 0.83
RAB40C-203ENST00000535977 KLRK1P26718 216 aa20.21■□□□□ 0.83
RAB40C-203ENST00000535977 TM4SF1P30408 202 aa20.21■□□□□ 0.83
RAB40C-203ENST00000535977 TXLNAP40222 546 aa20.21■□□□□ 0.83
RAB40C-203ENST00000535977 ARL6IP4Q66PJ3 421 aaKnown RBP20.21■□□□□ 0.83
RAB40C-203ENST00000535977 GOLGA1Q92805 767 aa20.21■□□□□ 0.83
RAB40C-203ENST00000535977 KAT14Q9H8E8 782 aa20.21■□□□□ 0.83
RAB40C-203ENST00000535977 QTRT2Q9H974 415 aaKnown RBP20.21■□□□□ 0.83
RAB40C-203ENST00000535977 DONSONQ9NYP3 566 aa20.21■□□□□ 0.83
RAB40C-203ENST00000535977 ZNF174Q15697 407 aa20.21■□□□□ 0.83
RAB40C-203ENST00000535977 EARS2Q5JPH6 523 aaKnown RBP20.21■□□□□ 0.83
RAB40C-203ENST00000535977 JAKMIP3Q5VZ66 844 aa20.21■□□□□ 0.83
RAB40C-203ENST00000535977 EPSTI1Q96J88 318 aa20.21■□□□□ 0.83
RAB40C-203ENST00000535977 INTS13Q9NVM9 706 aa20.21■□□□□ 0.83
RAB40C-203ENST00000535977 GNPATO15228 680 aa20.2■□□□□ 0.82
RAB40C-203ENST00000535977 PTGDRQ13258 359 aa20.2■□□□□ 0.82
RAB40C-203ENST00000535977 BRD3Q15059 726 aa20.2■□□□□ 0.82
RAB40C-203ENST00000535977 KIAA1551Q9HCM1 1747 aa20.2■□□□□ 0.82
RAB40C-203ENST00000535977 IRS2Q9Y4H2 1338 aa20.2■□□□□ 0.82
RAB40C-203ENST00000535977 FAM205CA6NFA0 338 aa20.2■□□□□ 0.82
RAB40C-203ENST00000535977 TMEM232C9JQI7 657 aa20.2■□□□□ 0.82
RAB40C-203ENST00000535977 BAG3O95817 575 aa20.2■□□□□ 0.82
RAB40C-203ENST00000535977 DPYDQ12882 1025 aa20.2■□□□□ 0.82
RAB40C-203ENST00000535977 NR1I3Q14994 352 aa20.2■□□□□ 0.82
RAB40C-203ENST00000535977 EFCAB13Q8IY85 973 aa20.2■□□□□ 0.82
RAB40C-203ENST00000535977 MCM9Q9NXL9 1143 aa20.2■□□□□ 0.82
RAB40C-203ENST00000535977 SRP68Q9UHB9 627 aaKnown RBP20.2■□□□□ 0.82
RAB40C-203ENST00000535977 LDHBP07195 334 aaKnown RBP20.19■□□□□ 0.82
RAB40C-203ENST00000535977 LDHCP07864 332 aa20.19■□□□□ 0.82
RAB40C-203ENST00000535977 GNG11P61952 73 aa20.19■□□□□ 0.82
RAB40C-203ENST00000535977 FAM47AQ5JRC9 791 aa20.19■□□□□ 0.82
RAB40C-203ENST00000535977 C12orf60Q5U649 245 aa20.19■□□□□ 0.82
RAB40C-203ENST00000535977 GALNT17Q6IS24 598 aa20.19■□□□□ 0.82
RAB40C-203ENST00000535977 GRAMD1CQ8IYS0 662 aa20.19■□□□□ 0.82
RAB40C-203ENST00000535977 CEP89Q96ST8 783 aa20.19■□□□□ 0.82
RAB40C-203ENST00000535977 BAG1Q99933 345 aaPredicted RBP20.19■□□□□ 0.82
RAB40C-203ENST00000535977 TCP11L1Q9NUJ3 509 aa20.19■□□□□ 0.82
RAB40C-203ENST00000535977 A0A1B0GTH6 734 aa20.19■□□□□ 0.82
RAB40C-203ENST00000535977 hCG_1642624A0A1W2PR95 340 aa20.19■□□□□ 0.82
RAB40C-203ENST00000535977 GOLGA8FQ08AF8 430 aa20.19■□□□□ 0.82
RAB40C-203ENST00000535977 GOLGA8DPQ0D2H9 430 aa20.19■□□□□ 0.82
RAB40C-203ENST00000535977 DHX37Q8IY37 1157 aaKnown RBP20.19■□□□□ 0.82
RAB40C-203ENST00000535977 BEND6Q5SZJ8 279 aaPredicted RBP20.18■□□□□ 0.82
RAB40C-203ENST00000535977 C15orf52Q6ZUT6 534 aaKnown RBP20.18■□□□□ 0.82
RAB40C-203ENST00000535977 TADA2BQ86TJ2 420 aa20.18■□□□□ 0.82
RAB40C-203ENST00000535977 USP5P45974 858 aa20.18■□□□□ 0.82
RAB40C-203ENST00000535977 PPP4CP60510 307 aa20.18■□□□□ 0.82
RAB40C-203ENST00000535977 RCSD1Q6JBY9 416 aa20.18■□□□□ 0.82
RAB40C-203ENST00000535977 HDXQ7Z353 690 aa20.18■□□□□ 0.82
RAB40C-203ENST00000535977 ZNF287Q9HBT7 754 aa20.18■□□□□ 0.82
RAB40C-203ENST00000535977 CCNL1Q9UK58 526 aaPredicted RBP20.18■□□□□ 0.82
RAB40C-203ENST00000535977 ROBO3Q96MS0 1386 aa20.18■□□□□ 0.82
RAB40C-203ENST00000535977 A0A087X0B3 334 aa20.18■□□□□ 0.82
RAB40C-203ENST00000535977 LONP1P36776 959 aaKnown RBP20.18■□□□□ 0.82
RAB40C-203ENST00000535977 AFMP43652 599 aa20.18■□□□□ 0.82
RAB40C-203ENST00000535977 CUL4BQ13620 913 aa20.18■□□□□ 0.82
RAB40C-203ENST00000535977 FILIP1LQ4L180 1135 aa20.18■□□□□ 0.82
RAB40C-203ENST00000535977 TMEM139Q8IV31 216 aa20.18■□□□□ 0.82
RAB40C-203ENST00000535977 ZSWIM4Q9H7M6 989 aa20.18■□□□□ 0.82
RAB40C-203ENST00000535977 SUFUQ9UMX1 484 aa20.18■□□□□ 0.82
RAB40C-203ENST00000535977 PPP2R2CQ9Y2T4 447 aa20.18■□□□□ 0.82
RAB40C-203ENST00000535977 NMT2O60551 498 aa20.17■□□□□ 0.82
RAB40C-203ENST00000535977 KCNQ4P56696 695 aa20.17■□□□□ 0.82
RAB40C-203ENST00000535977 TFAP4Q01664 338 aa20.17■□□□□ 0.82
RAB40C-203ENST00000535977 GRAPQ13588 217 aa20.17■□□□□ 0.82
RAB40C-203ENST00000535977 ZNF827Q17R98 1081 aa20.17■□□□□ 0.82
RAB40C-203ENST00000535977 POTEAQ6S8J7 498 aa20.17■□□□□ 0.82
RAB40C-203ENST00000535977 PIK3AP1Q6ZUJ8 805 aa20.17■□□□□ 0.82
RAB40C-203ENST00000535977 MICALL1Q8N3F8 863 aa20.17■□□□□ 0.82
RAB40C-203ENST00000535977 GRAPLQ8TC17 118 aaPredicted RBP20.17■□□□□ 0.82
RAB40C-203ENST00000535977 CYP2D6P10635 497 aa20.17■□□□□ 0.82
RAB40C-203ENST00000535977 MAP2K2P36507 400 aa20.17■□□□□ 0.82
RAB40C-203ENST00000535977 SEMA3FQ13275 785 aa20.17■□□□□ 0.82
RAB40C-203ENST00000535977 BLIDQ8IZY5 108 aa20.17■□□□□ 0.82
RAB40C-203ENST00000535977 ARHGEF1Q92888 912 aaKnown RBP20.17■□□□□ 0.82
RAB40C-203ENST00000535977 PANX2Q96RD6 677 aa20.17■□□□□ 0.82
RAB40C-203ENST00000535977 LZTS2Q9BRK4 669 aa20.17■□□□□ 0.82
RAB40C-203ENST00000535977 NAA15Q9BXJ9 866 aaKnown RBP20.17■□□□□ 0.82
RAB40C-203ENST00000535977 SAMSN1Q9NSI8 373 aaKnown RBP20.17■□□□□ 0.82
RAB40C-203ENST00000535977 RMND1Q9NWS8 449 aa20.17■□□□□ 0.82
RAB40C-203ENST00000535977 SYNRGQ9UMZ2 1314 aa20.16■□□□□ 0.82
RAB40C-203ENST00000535977 ZNF804AQ7Z570 1209 aa20.16■□□□□ 0.82
RAB40C-203ENST00000535977 TRMT44Q8IYL2 757 aaKnown RBP20.16■□□□□ 0.82
RAB40C-203ENST00000535977 TC2NQ8N9U0 490 aa20.16■□□□□ 0.82
RAB40C-203ENST00000535977 ANKRD20A12PQ8NF67 263 aa20.16■□□□□ 0.82
RAB40C-203ENST00000535977 MED15Q96RN5 788 aa20.16■□□□□ 0.82
RAB40C-203ENST00000535977 SUGCTQ9HAC7 445 aa20.16■□□□□ 0.82
RAB40C-203ENST00000535977 ANKIB1Q9P2G1 1089 aa20.16■□□□□ 0.82
RAB40C-203ENST00000535977 GRM4Q14833 912 aa20.16■□□□□ 0.82
RAB40C-203ENST00000535977 WWC2Q6AWC2 1192 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms