RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 USP33Q8TEY7 942 aa1.89□□□□□ -2.11
COPB1-212ENST00000534771 MZB1Q8WU39 189 aa1.89□□□□□ -2.11
COPB1-212ENST00000534771 TMEM87BQ96K49 555 aa1.89□□□□□ -2.11
COPB1-212ENST00000534771 ZMYM5Q9UJ78 669 aa1.89□□□□□ -2.11
COPB1-212ENST00000534771 ZNF281Q9Y2X9 895 aa1.89□□□□□ -2.11
COPB1-212ENST00000534771 A0A087X1B8 175 aa1.88□□□□□ -2.11
COPB1-212ENST00000534771 SSU72P8A0A1W2PR75 194 aa1.88□□□□□ -2.11
COPB1-212ENST00000534771 RBM47A0AV96 593 aaKnown RBP1.88□□□□□ -2.11
COPB1-212ENST00000534771 NOTOA8MTQ0 251 aa1.88□□□□□ -2.11
COPB1-212ENST00000534771 UPK3BL1B0FP48 263 aa1.88□□□□□ -2.11
COPB1-212ENST00000534771 UPK3BL2E5RIL1 263 aa1.88□□□□□ -2.11
COPB1-212ENST00000534771 NPIPB8E9PQR5 432 aa1.88□□□□□ -2.11
COPB1-212ENST00000534771 IRS4O14654 1257 aaPredicted RBP1.88□□□□□ -2.11
COPB1-212ENST00000534771 NRDCO43847 1150 aa1.88□□□□□ -2.11
COPB1-212ENST00000534771 MPOP05164 745 aa1.88□□□□□ -2.11
COPB1-212ENST00000534771 KRT10P13645 584 aa1.88□□□□□ -2.11
COPB1-212ENST00000534771 PNLIPP16233 465 aa1.88□□□□□ -2.11
COPB1-212ENST00000534771 RPL10P27635 214 aaKnown RBP1.88□□□□□ -2.11
COPB1-212ENST00000534771 KIR2DL1P43626 348 aaPredicted RBP1.88□□□□□ -2.11
COPB1-212ENST00000534771 KIR2DL2P43627 348 aaPredicted RBP1.88□□□□□ -2.11
COPB1-212ENST00000534771 CDR1P51861 262 aa1.88□□□□□ -2.11
COPB1-212ENST00000534771 RPS26P62854 115 aaKnown RBP1.88□□□□□ -2.11
COPB1-212ENST00000534771 YBX1P67809 324 aaKnown RBP1.88□□□□□ -2.11
COPB1-212ENST00000534771 PAPD7Q5XG87 772 aaKnown RBP1.88□□□□□ -2.11
COPB1-212ENST00000534771 ZKSCAN2Q63HK3 967 aa1.88□□□□□ -2.11
COPB1-212ENST00000534771 CEP128Q6ZU80 1094 aa1.88□□□□□ -2.11
COPB1-212ENST00000534771 LDHDQ86WU2 507 aa1.88□□□□□ -2.11
COPB1-212ENST00000534771 NLGN1Q8N2Q7 840 aa1.88□□□□□ -2.11
COPB1-212ENST00000534771 CCDC82Q8N4S0 544 aa1.88□□□□□ -2.11
COPB1-212ENST00000534771 USHBP1Q8N6Y0 703 aa1.88□□□□□ -2.11
COPB1-212ENST00000534771 ENOX1Q8TC92 643 aaKnown RBP1.88□□□□□ -2.11
COPB1-212ENST00000534771 FBF1Q8TES7 1133 aa1.88□□□□□ -2.11
COPB1-212ENST00000534771 GAL3ST3Q96A11 431 aa1.88□□□□□ -2.11
COPB1-212ENST00000534771 ACSF2Q96CM8 615 aaPredicted RBP1.88□□□□□ -2.11
COPB1-212ENST00000534771 G6PC3Q9BUM1 346 aa1.88□□□□□ -2.11
COPB1-212ENST00000534771 KRTAP2-2Q9BYT5 123 aa1.88□□□□□ -2.11
COPB1-212ENST00000534771 ASCC2Q9H1I8 757 aaPredicted RBP1.88□□□□□ -2.11
COPB1-212ENST00000534771 FAM8A1Q9UBU6 413 aa1.88□□□□□ -2.11
COPB1-212ENST00000534771 DCTN4Q9UJW0 460 aa1.88□□□□□ -2.11
COPB1-212ENST00000534771 ADAM30Q9UKF2 790 aa1.88□□□□□ -2.11
COPB1-212ENST00000534771 USTQ9Y2C2 406 aa1.88□□□□□ -2.11
COPB1-212ENST00000534771 PCDHB5Q9Y5E4 795 aa1.88□□□□□ -2.11
COPB1-212ENST00000534771 FFAR3O14843 346 aa1.87□□□□□ -2.11
COPB1-212ENST00000534771 TREHO43280 583 aa1.87□□□□□ -2.11
COPB1-212ENST00000534771 BUB1BO60566 1050 aaPredicted RBP1.87□□□□□ -2.11
COPB1-212ENST00000534771 USP2O75604 605 aaPredicted RBP1.87□□□□□ -2.11
COPB1-212ENST00000534771 ARL4AP40617 200 aa1.87□□□□□ -2.11
COPB1-212ENST00000534771 MAPK8P45983 427 aa1.87□□□□□ -2.11
COPB1-212ENST00000534771 TNNI2P48788 182 aa1.87□□□□□ -2.11
COPB1-212ENST00000534771 YARSP54577 528 aaKnown RBP1.87□□□□□ -2.11
COPB1-212ENST00000534771 MRPS21P82921 87 aaKnown RBP1.87□□□□□ -2.11
COPB1-212ENST00000534771 CAP1Q01518 475 aa1.87□□□□□ -2.11
COPB1-212ENST00000534771 TMEM62Q0P6H9 643 aa1.87□□□□□ -2.11
COPB1-212ENST00000534771 TSNAXIP1Q2TAA8 658 aa1.87□□□□□ -2.11
COPB1-212ENST00000534771 ATG9BQ674R7 924 aa1.87□□□□□ -2.11
COPB1-212ENST00000534771 DIEXFQ68CQ4 756 aaKnown RBP1.87□□□□□ -2.11
COPB1-212ENST00000534771 ALG1LQ6GMV1 187 aa1.87□□□□□ -2.11
COPB1-212ENST00000534771 RNF111Q6ZNA4 994 aa1.87□□□□□ -2.11
COPB1-212ENST00000534771 WAPLQ7Z5K2 1190 aa1.87□□□□□ -2.11
COPB1-212ENST00000534771 IGDCC3Q8IVU1 814 aa1.87□□□□□ -2.11
COPB1-212ENST00000534771 FAM13CQ8NE31 585 aa1.87□□□□□ -2.11
COPB1-212ENST00000534771 CYB5D2Q8WUJ1 264 aa1.87□□□□□ -2.11
COPB1-212ENST00000534771 RNF141Q8WVD5 230 aa1.87□□□□□ -2.11
COPB1-212ENST00000534771 MIR1-1HGQ9H1L0 117 aa1.87□□□□□ -2.11
COPB1-212ENST00000534771 C12orf49Q9H741 205 aa1.87□□□□□ -2.11
COPB1-212ENST00000534771 KLHL14Q9P2G3 628 aa1.87□□□□□ -2.11
COPB1-212ENST00000534771 BIN2Q9UBW5 565 aaPredicted RBP1.87□□□□□ -2.11
COPB1-212ENST00000534771 TTF2Q9UNY4 1162 aaKnown RBP1.87□□□□□ -2.11
COPB1-212ENST00000534771 SPG7Q9UQ90 795 aa1.87□□□□□ -2.11
COPB1-212ENST00000534771 SHISA3A0PJX4 238 aa1.86□□□□□ -2.11
COPB1-212ENST00000534771 IKBKBO14920 756 aa1.86□□□□□ -2.11
COPB1-212ENST00000534771 KRTAP5-8O75690 187 aa1.86□□□□□ -2.11
COPB1-212ENST00000534771 EFEMP2O95967 443 aa1.86□□□□□ -2.11
COPB1-212ENST00000534771 USP17L7P0C7H9 530 aa1.86□□□□□ -2.11
COPB1-212ENST00000534771 PLCG1P19174 1290 aa1.86□□□□□ -2.11
COPB1-212ENST00000534771 SDHBP21912 280 aa1.86□□□□□ -2.11
COPB1-212ENST00000534771 GBP1P32455 592 aa1.86□□□□□ -2.11
COPB1-212ENST00000534771 PCBP3P57721 371 aaKnown RBP1.86□□□□□ -2.11
COPB1-212ENST00000534771 RTP1P59025 263 aa1.86□□□□□ -2.11
COPB1-212ENST00000534771 CHMP4BP1P59074 171 aa1.86□□□□□ -2.11
COPB1-212ENST00000534771 ERVFRD-1P60508 538 aa1.86□□□□□ -2.11
COPB1-212ENST00000534771 RPL6Q02878 288 aaKnown RBP1.86□□□□□ -2.11
COPB1-212ENST00000534771 SEPT6Q14141 434 aa1.86□□□□□ -2.11
COPB1-212ENST00000534771 RAB3GAP1Q15042 981 aa1.86□□□□□ -2.11
COPB1-212ENST00000534771 CCDC85BQ15834 202 aaPredicted RBP1.86□□□□□ -2.11
COPB1-212ENST00000534771 GALNT18Q6P9A2 607 aa1.86□□□□□ -2.11
COPB1-212ENST00000534771 AGMOQ6ZNB7 445 aa1.86□□□□□ -2.11
COPB1-212ENST00000534771 ADGRG2Q8IZP9 1017 aa1.86□□□□□ -2.11
COPB1-212ENST00000534771 SYTL5Q8TDW5 730 aaPredicted RBP1.86□□□□□ -2.11
COPB1-212ENST00000534771 JARID2Q92833 1246 aaPredicted RBP1.86□□□□□ -2.11
COPB1-212ENST00000534771 MAP6Q96JE9 813 aa1.86□□□□□ -2.11
COPB1-212ENST00000534771 HHIPL1Q96JK4 782 aa1.86□□□□□ -2.11
COPB1-212ENST00000534771 CCDC74BQ96LY2 380 aa1.86□□□□□ -2.11
COPB1-212ENST00000534771 KREMEN1Q96MU8 473 aa1.86□□□□□ -2.11
COPB1-212ENST00000534771 FRMD6Q96NE9 622 aa1.86□□□□□ -2.11
COPB1-212ENST00000534771 ASPNQ9BXN1 380 aa1.86□□□□□ -2.11
COPB1-212ENST00000534771 PCDHA5Q9Y5H7 936 aa1.86□□□□□ -2.11
COPB1-212ENST00000534771 WTIPA6NIX2 430 aaPredicted RBP1.85□□□□□ -2.11
COPB1-212ENST00000534771 SOWAHDA6NJG2 315 aa1.85□□□□□ -2.11
COPB1-212ENST00000534771 PFKLP17858 780 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms