RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 SAMD1Q6SPF0 538 aaPredicted RBP16.38■□□□□ 0.21
TSPAN4-220ENST00000532375 CASC1Q6TDU7 716 aa16.38■□□□□ 0.21
TSPAN4-220ENST00000532375 CHST3Q7LGC8 479 aa16.38■□□□□ 0.21
TSPAN4-220ENST00000532375 PNMA1Q8ND90 353 aa16.38■□□□□ 0.21
TSPAN4-220ENST00000532375 RAET1EQ8TD07 263 aa16.38■□□□□ 0.21
TSPAN4-220ENST00000532375 CHURC1Q8WUH1 139 aa16.38■□□□□ 0.21
TSPAN4-220ENST00000532375 KIFC2Q96AC6 838 aa16.38■□□□□ 0.21
TSPAN4-220ENST00000532375 SLC15A5A6NIM6 579 aa16.37■□□□□ 0.21
TSPAN4-220ENST00000532375 ADCY3O60266 1144 aa16.37■□□□□ 0.21
TSPAN4-220ENST00000532375 XRCC5P13010 732 aaKnown RBP16.37■□□□□ 0.21
TSPAN4-220ENST00000532375 ELNP15502 786 aa16.37■□□□□ 0.21
TSPAN4-220ENST00000532375 STAT2P52630 851 aa16.37■□□□□ 0.21
TSPAN4-220ENST00000532375 TRDNQ13061 729 aa16.37■□□□□ 0.21
TSPAN4-220ENST00000532375 GRB14Q14449 540 aa16.37■□□□□ 0.21
TSPAN4-220ENST00000532375 SLC9C1Q4G0N8 1177 aa16.37■□□□□ 0.21
TSPAN4-220ENST00000532375 FAM160B2Q86V87 743 aa16.37■□□□□ 0.21
TSPAN4-220ENST00000532375 NUDT12Q9BQG2 462 aa16.37■□□□□ 0.21
TSPAN4-220ENST00000532375 MROH8Q9H579 483 aa16.37■□□□□ 0.21
TSPAN4-220ENST00000532375 PRR12Q9ULL5 1215 aa16.37■□□□□ 0.21
TSPAN4-220ENST00000532375 MTMR7Q9Y216 660 aa16.37■□□□□ 0.21
TSPAN4-220ENST00000532375 ZNF236Q9UL36 1845 aa16.36■□□□□ 0.21
TSPAN4-220ENST00000532375 BRCA2P51587 3418 aa16.36■□□□□ 0.21
TSPAN4-220ENST00000532375 SLC25A27O95847 323 aa16.36■□□□□ 0.21
TSPAN4-220ENST00000532375 HOXC6P09630 235 aa16.36■□□□□ 0.21
TSPAN4-220ENST00000532375 FDX1P10109 184 aa16.36■□□□□ 0.21
TSPAN4-220ENST00000532375 CYP2B6P20813 491 aa16.36■□□□□ 0.21
TSPAN4-220ENST00000532375 SLC16A2P36021 539 aa16.36■□□□□ 0.21
TSPAN4-220ENST00000532375 MAP2K5Q13163 448 aa16.36■□□□□ 0.21
TSPAN4-220ENST00000532375 PLS1Q14651 629 aa16.36■□□□□ 0.21
TSPAN4-220ENST00000532375 SOCS4Q8WXH5 440 aa16.36■□□□□ 0.21
TSPAN4-220ENST00000532375 UBAC1Q9BSL1 405 aa16.36■□□□□ 0.21
TSPAN4-220ENST00000532375 RAVER2Q9HCJ3 691 aaKnown RBP16.36■□□□□ 0.21
TSPAN4-220ENST00000532375 GPHNQ9NQX3 736 aaPredicted RBP16.36■□□□□ 0.21
TSPAN4-220ENST00000532375 STRNO43815 780 aa16.35■□□□□ 0.21
TSPAN4-220ENST00000532375 COBLO75128 1261 aa16.35■□□□□ 0.21
TSPAN4-220ENST00000532375 ZBED4O75132 1171 aa16.35■□□□□ 0.21
TSPAN4-220ENST00000532375 HSPA4P34932 840 aa16.35■□□□□ 0.21
TSPAN4-220ENST00000532375 OAZ1P54368 228 aa16.35■□□□□ 0.21
TSPAN4-220ENST00000532375 MTFR1Q15390 333 aa16.35■□□□□ 0.21
TSPAN4-220ENST00000532375 ADCK5Q3MIX3 580 aa16.35■□□□□ 0.21
TSPAN4-220ENST00000532375 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.35■□□□□ 0.215e-6■■■■■ 45.5
TSPAN4-220ENST00000532375 RALYLQ86SE5 291 aaKnown RBP16.35■□□□□ 0.21
TSPAN4-220ENST00000532375 SLAIN1Q8ND83 568 aa16.35■□□□□ 0.21
TSPAN4-220ENST00000532375 NPLOC4Q8TAT6 608 aa16.35■□□□□ 0.21
TSPAN4-220ENST00000532375 MTA3Q9BTC8 594 aa16.35■□□□□ 0.21
TSPAN4-220ENST00000532375 TEX13BQ9BXU2 312 aa16.35■□□□□ 0.21
TSPAN4-220ENST00000532375 GPCPD1Q9NPB8 672 aa16.35■□□□□ 0.21
TSPAN4-220ENST00000532375 FRMPD2Q68DX3 1309 aaPredicted RBP16.35■□□□□ 0.21
TSPAN4-220ENST00000532375 RBBP6Q7Z6E9 1792 aaKnown RBP16.35■□□□□ 0.21
TSPAN4-220ENST00000532375 IFIT3O14879 490 aaKnown RBP16.34■□□□□ 0.21
TSPAN4-220ENST00000532375 GOLGA8HP0CJ92 632 aa16.34■□□□□ 0.21
TSPAN4-220ENST00000532375 SNAP25P60880 206 aa16.34■□□□□ 0.21
TSPAN4-220ENST00000532375 EXOSC10Q01780 885 aaKnown RBP16.34■□□□□ 0.21
TSPAN4-220ENST00000532375 TROAPQ12815 778 aa16.34■□□□□ 0.21
TSPAN4-220ENST00000532375 TRIM32Q13049 653 aa16.34■□□□□ 0.21
TSPAN4-220ENST00000532375 CCL14Q16627 93 aa16.34■□□□□ 0.21
TSPAN4-220ENST00000532375 CCDC96Q2M329 555 aa16.34■□□□□ 0.21
TSPAN4-220ENST00000532375 IFIT1BQ5T764 474 aaKnown RBP16.34■□□□□ 0.21
TSPAN4-220ENST00000532375 SYDE2Q5VT97 1194 aa16.34■□□□□ 0.21
TSPAN4-220ENST00000532375 NBPF11Q86T75 865 aa16.34■□□□□ 0.21
TSPAN4-220ENST00000532375 NCAPG2Q86XI2 1143 aa16.34■□□□□ 0.21
TSPAN4-220ENST00000532375 CCAR1Q8IX12 1150 aaKnown RBP16.34■□□□□ 0.21
TSPAN4-220ENST00000532375 ABRAQ8N0Z2 381 aa16.34■□□□□ 0.21
TSPAN4-220ENST00000532375 CPXCR1Q8N123 301 aa16.34■□□□□ 0.21
TSPAN4-220ENST00000532375 TRIB2Q92519 343 aa16.34■□□□□ 0.21
TSPAN4-220ENST00000532375 RANBP17Q9H2T7 1088 aaKnown RBP16.34■□□□□ 0.21
TSPAN4-220ENST00000532375 CPVLQ9H3G5 476 aa16.34■□□□□ 0.21
TSPAN4-220ENST00000532375 KAT14Q9H8E8 782 aa16.34■□□□□ 0.21
TSPAN4-220ENST00000532375 FLRT1Q9NZU1 646 aa16.34■□□□□ 0.21
TSPAN4-220ENST00000532375 POTEFA5A3E0 1075 aa16.33■□□□□ 0.2
TSPAN4-220ENST00000532375 PALM3A6NDB9 673 aaPredicted RBP16.33■□□□□ 0.2
TSPAN4-220ENST00000532375 EPB41L2O43491 1005 aaKnown RBP16.33■□□□□ 0.2
TSPAN4-220ENST00000532375 PRC1O43663 620 aa16.33■□□□□ 0.2
TSPAN4-220ENST00000532375 ADORA2AP29274 412 aa16.33■□□□□ 0.2
TSPAN4-220ENST00000532375 RGS2P41220 211 aa16.33■□□□□ 0.2
TSPAN4-220ENST00000532375 RGS19P49795 217 aa16.33■□□□□ 0.2
TSPAN4-220ENST00000532375 SLC35G1Q2M3R5 365 aa16.33■□□□□ 0.2
TSPAN4-220ENST00000532375 GPATCH4Q5T3I0 446 aaKnown RBP16.33■□□□□ 0.2
TSPAN4-220ENST00000532375 MAP3K21Q5TCX8 1036 aa16.33■□□□□ 0.2
TSPAN4-220ENST00000532375 WDR78Q5VTH9 848 aa16.33■□□□□ 0.2
TSPAN4-220ENST00000532375 SNRNP48Q6IEG0 339 aaKnown RBP16.33■□□□□ 0.2
TSPAN4-220ENST00000532375 STAG2Q8N3U4 1231 aa16.33■□□□□ 0.2
TSPAN4-220ENST00000532375 AGBL1Q96MI9 1066 aa16.33■□□□□ 0.2
TSPAN4-220ENST00000532375 USP26Q9BXU7 913 aa16.33■□□□□ 0.2
TSPAN4-220ENST00000532375 LY9Q9HBG7 655 aa16.33■□□□□ 0.2
TSPAN4-220ENST00000532375 SH2B2O14492 632 aaPredicted RBP16.32■□□□□ 0.2
TSPAN4-220ENST00000532375 INHAP05111 366 aa16.32■□□□□ 0.2
TSPAN4-220ENST00000532375 MCM5P33992 734 aa16.32■□□□□ 0.2
TSPAN4-220ENST00000532375 TMEM67Q5HYA8 995 aa16.32■□□□□ 0.2
TSPAN4-220ENST00000532375 RNF20Q5VTR2 975 aa16.32■□□□□ 0.2
TSPAN4-220ENST00000532375 NEK1Q96PY6 1258 aa16.32■□□□□ 0.2
TSPAN4-220ENST00000532375 APBA2Q99767 749 aa16.32■□□□□ 0.2
TSPAN4-220ENST00000532375 UBA5Q9GZZ9 404 aa16.32■□□□□ 0.2
TSPAN4-220ENST00000532375 MAD2L2Q9UI95 211 aa16.32■□□□□ 0.2
TSPAN4-220ENST00000532375 BAZ2BQ9UIF8 2168 aaKnown RBP16.32■□□□□ 0.2
TSPAN4-220ENST00000532375 PLXNA1Q9UIW2 1896 aa16.32■□□□□ 0.2
TSPAN4-220ENST00000532375 SNX14Q9Y5W7 946 aa16.32■□□□□ 0.2
TSPAN4-220ENST00000532375 DNAJC25-GNG10A0A024R161 153 aa16.31■□□□□ 0.2
TSPAN4-220ENST00000532375 REC8O95072 547 aa16.31■□□□□ 0.2
TSPAN4-220ENST00000532375 SLC34A2O95436 690 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms