RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 TOX2Q96NM4 488 aa25.31■■□□□ 1.64
CHKA-206ENST00000531341 TSEN34Q9BSV6 310 aaKnown RBP25.31■■□□□ 1.64
CHKA-206ENST00000531341 CNPY2Q9Y2B0 182 aa25.31■■□□□ 1.64
CHKA-206ENST00000531341 TMEM265A0A087WTH1 108 aa25.3■■□□□ 1.64
CHKA-206ENST00000531341 ADCY6O43306 1168 aa25.3■■□□□ 1.64
CHKA-206ENST00000531341 DNAJB2P25686 324 aa25.3■■□□□ 1.64
CHKA-206ENST00000531341 UBE3CQ15386 1083 aa25.3■■□□□ 1.64
CHKA-206ENST00000531341 C16orf59Q7L2K0 433 aa25.3■■□□□ 1.64
CHKA-206ENST00000531341 RPAP2Q8IXW5 612 aaPredicted RBP25.3■■□□□ 1.64
CHKA-206ENST00000531341 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.3■■□□□ 1.641e-25■□□□□ 11.1
CHKA-206ENST00000531341 PRDM6Q9NQX0 595 aa25.3■■□□□ 1.64
CHKA-206ENST00000531341 DNAJC25-GNG10A0A024R161 153 aa25.29■■□□□ 1.64
CHKA-206ENST00000531341 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.29■■□□□ 1.64
CHKA-206ENST00000531341 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.29■■□□□ 1.64
CHKA-206ENST00000531341 TIMP1P01033 207 aa25.29■■□□□ 1.64
CHKA-206ENST00000531341 SLC4A3P48751 1232 aa25.29■■□□□ 1.64
CHKA-206ENST00000531341 SNRNP48Q6IEG0 339 aaKnown RBP25.29■■□□□ 1.64
CHKA-206ENST00000531341 AMOTL1Q8IY63 956 aa25.29■■□□□ 1.64
CHKA-206ENST00000531341 SLF1Q9BQI6 1058 aa25.29■■□□□ 1.64
CHKA-206ENST00000531341 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.29■■□□□ 1.64
CHKA-206ENST00000531341 ZBTB40Q9NUA8 1239 aa25.29■■□□□ 1.64
CHKA-206ENST00000531341 ZHX1Q9UKY1 873 aaPredicted RBP25.29■■□□□ 1.64
CHKA-206ENST00000531341 FAM184BQ9ULE4 1060 aa25.29■■□□□ 1.64
CHKA-206ENST00000531341 DCDC2CA8MYV0 355 aa25.28■■□□□ 1.64
CHKA-206ENST00000531341 RASA1P20936 1047 aa25.28■■□□□ 1.64
CHKA-206ENST00000531341 MAMDC4Q6UXC1 1216 aa25.28■■□□□ 1.64
CHKA-206ENST00000531341 NUP133Q8WUM0 1156 aa25.28■■□□□ 1.64
CHKA-206ENST00000531341 TEX13BQ9BXU2 312 aa25.28■■□□□ 1.64
CHKA-206ENST00000531341 TBX21Q9UL17 535 aa25.28■■□□□ 1.64
CHKA-206ENST00000531341 MOXD2PA6NHM9 499 aa25.27■■□□□ 1.64
CHKA-206ENST00000531341 F5H6K3 240 aa25.27■■□□□ 1.64
CHKA-206ENST00000531341 RAB11FIP3O75154 756 aa25.27■■□□□ 1.64
CHKA-206ENST00000531341 COPB2P35606 906 aa25.27■■□□□ 1.64
CHKA-206ENST00000531341 CDK7P50613 346 aa25.27■■□□□ 1.64
CHKA-206ENST00000531341 KLRC3Q07444 240 aa25.27■■□□□ 1.64
CHKA-206ENST00000531341 DDX11Q96FC9 970 aa25.27■■□□□ 1.64
CHKA-206ENST00000531341 FGD4Q96M96 766 aa25.27■■□□□ 1.64
CHKA-206ENST00000531341 ZNF576Q9H609 170 aa25.27■■□□□ 1.64
CHKA-206ENST00000531341 COG6Q9Y2V7 657 aa25.27■■□□□ 1.64
CHKA-206ENST00000531341 XIRP2A4UGR9 3374 aa25.27■■□□□ 1.64
CHKA-206ENST00000531341 SYNGAP1Q96PV0 1343 aa25.27■■□□□ 1.64
CHKA-206ENST00000531341 GRXCR1A8MXD5 290 aa25.26■■□□□ 1.63
CHKA-206ENST00000531341 NDUFB10O96000 172 aa25.26■■□□□ 1.63
CHKA-206ENST00000531341 PBX2P40425 430 aa25.26■■□□□ 1.63
CHKA-206ENST00000531341 ACVR2BQ13705 512 aa25.26■■□□□ 1.63
CHKA-206ENST00000531341 CPXCR1Q8N123 301 aa25.26■■□□□ 1.63
CHKA-206ENST00000531341 MSL3Q8N5Y2 521 aaKnown RBP25.26■■□□□ 1.63
CHKA-206ENST00000531341 CHD7Q9P2D1 2997 aa25.26■■□□□ 1.63
CHKA-206ENST00000531341 REV3LO60673 3130 aa25.26■■□□□ 1.63
CHKA-206ENST00000531341 DUSP11O75319 330 aaKnown RBP25.25■■□□□ 1.63
CHKA-206ENST00000531341 TMEM240Q5SV17 173 aa25.25■■□□□ 1.63
CHKA-206ENST00000531341 MFSD5Q6N075 450 aa25.25■■□□□ 1.63
CHKA-206ENST00000531341 TIFAQ96CG3 184 aa25.25■■□□□ 1.63
CHKA-206ENST00000531341 DDRGK1Q96HY6 314 aa25.25■■□□□ 1.63
CHKA-206ENST00000531341 STRBPQ96SI9 672 aaKnown RBP25.25■■□□□ 1.63
CHKA-206ENST00000531341 RAVER2Q9HCJ3 691 aaKnown RBP25.25■■□□□ 1.63
CHKA-206ENST00000531341 GREB1LQ9C091 1923 aaPredicted RBP25.24■■□□□ 1.63
CHKA-206ENST00000531341 GSG1L2A8MUP6 293 aa25.24■■□□□ 1.63
CHKA-206ENST00000531341 HMMRO75330 724 aa25.24■■□□□ 1.63
CHKA-206ENST00000531341 ASGR1P07306 291 aa25.24■■□□□ 1.63
CHKA-206ENST00000531341 PRPF38AQ8NAV1 312 aaKnown RBP25.24■■□□□ 1.63
CHKA-206ENST00000531341 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.24■■□□□ 1.63
CHKA-206ENST00000531341 NYAP2Q9P242 653 aa25.24■■□□□ 1.63
CHKA-206ENST00000531341 ARPP21Q9UBL0 812 aaPredicted RBP25.24■■□□□ 1.63
CHKA-206ENST00000531341 CLIP2Q9UDT6 1046 aa25.24■■□□□ 1.63
CHKA-206ENST00000531341 TTC28Q96AY4 2481 aa25.23■■□□□ 1.63
CHKA-206ENST00000531341 SMARCA5O60264 1052 aaPredicted RBP25.23■■□□□ 1.63
CHKA-206ENST00000531341 C6orf222P0C671 652 aaPredicted RBP25.23■■□□□ 1.63
CHKA-206ENST00000531341 ACRP10323 421 aa25.23■■□□□ 1.63
CHKA-206ENST00000531341 CCDC144BQ3MJ40 725 aa25.23■■□□□ 1.63
CHKA-206ENST00000531341 SBK1Q52WX2 424 aa25.23■■□□□ 1.63
CHKA-206ENST00000531341 SYMPKQ92797 1274 aaKnown RBP25.23■■□□□ 1.63
CHKA-206ENST00000531341 GLT1D1Q96MS3 346 aa25.23■■□□□ 1.63
CHKA-206ENST00000531341 PBX4Q9BYU1 374 aa25.23■■□□□ 1.63
CHKA-206ENST00000531341 ELP1O95163 1332 aa25.22■■□□□ 1.63
CHKA-206ENST00000531341 IGKV6D-41A0A0C4DH26 115 aa25.22■■□□□ 1.63
CHKA-206ENST00000531341 MINDY4BA8MYZ0 360 aa25.22■■□□□ 1.63
CHKA-206ENST00000531341 ATP2A1O14983 1001 aa25.22■■□□□ 1.63
CHKA-206ENST00000531341 CSF2RAP15509 400 aa25.22■■□□□ 1.63
CHKA-206ENST00000531341 CST5P28325 142 aaPredicted RBP25.22■■□□□ 1.63
CHKA-206ENST00000531341 RASIP1Q5U651 963 aa25.22■■□□□ 1.63
CHKA-206ENST00000531341 ZNF467Q7Z7K2 595 aaPredicted RBP25.22■■□□□ 1.63
CHKA-206ENST00000531341 KIFC2Q96AC6 838 aa25.22■■□□□ 1.63
CHKA-206ENST00000531341 MKNK2Q9HBH9 465 aa25.22■■□□□ 1.63
CHKA-206ENST00000531341 CTAGE5O15320 804 aa25.21■■□□□ 1.63
CHKA-206ENST00000531341 ZBED4O75132 1171 aa25.21■■□□□ 1.63
CHKA-206ENST00000531341 GJA9P57773 515 aa25.21■■□□□ 1.63
CHKA-206ENST00000531341 TJAP1Q5JTD0 557 aa25.21■■□□□ 1.63
CHKA-206ENST00000531341 PPM1EQ8WY54 764 aa25.21■■□□□ 1.63
CHKA-206ENST00000531341 VTI1AQ96AJ9 217 aa25.21■■□□□ 1.63
CHKA-206ENST00000531341 KATNBL1Q9H079 304 aa25.21■■□□□ 1.63
CHKA-206ENST00000531341 UPF3AQ9H1J1 476 aaKnown RBP25.21■■□□□ 1.63
CHKA-206ENST00000531341 SLC38A10Q9HBR0 1119 aa25.21■■□□□ 1.63
CHKA-206ENST00000531341 ARVCFO00192 962 aa25.2■■□□□ 1.62
CHKA-206ENST00000531341 ZSCAN25Q6NSZ9 544 aa25.2■■□□□ 1.62
CHKA-206ENST00000531341 ZNF365Q70YC5 407 aa25.2■■□□□ 1.62
CHKA-206ENST00000531341 FAM126BQ8IXS8 530 aa25.2■■□□□ 1.62
CHKA-206ENST00000531341 ANKRD35Q8N283 1001 aa25.2■■□□□ 1.62
CHKA-206ENST00000531341 OSBP2Q969R2 916 aa25.2■■□□□ 1.62
CHKA-206ENST00000531341 PPP1R12CQ9BZL4 782 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms