RNA–Protein interactions for RNA: ENST00000530620.5

C11orf54-209, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-209ENST00000530620 SWAP70Q9UH65 585 aa12.85□□□□□ -0.35
C11orf54-209ENST00000530620 DDX20Q9UHI6 824 aaKnown RBP12.85□□□□□ -0.35
C11orf54-209ENST00000530620 MCM3APO60318 1980 aa12.85□□□□□ -0.35
C11orf54-209ENST00000530620 ERCC3P19447 782 aa12.84□□□□□ -0.35
C11orf54-209ENST00000530620 ADORA2AP29274 412 aa12.84□□□□□ -0.35
C11orf54-209ENST00000530620 CNGA1P29973 690 aa12.84□□□□□ -0.35
C11orf54-209ENST00000530620 SIAH1Q8IUQ4 282 aa12.84□□□□□ -0.35
C11orf54-209ENST00000530620 TDHQ8IZJ6 230 aa12.84□□□□□ -0.35
C11orf54-209ENST00000530620 SPICE1Q8N0Z3 855 aa12.84□□□□□ -0.35
C11orf54-209ENST00000530620 ATG4CQ96DT6 458 aa12.84□□□□□ -0.35
C11orf54-209ENST00000530620 HAUS7Q99871 368 aa12.84□□□□□ -0.35
C11orf54-209ENST00000530620 UBE2OQ9C0C9 1292 aaKnown RBP12.84□□□□□ -0.35
C11orf54-209ENST00000530620 ARHGEF10LQ9HCE6 1279 aa12.84□□□□□ -0.35
C11orf54-209ENST00000530620 ATP8A2Q9NTI2 1148 aa12.84□□□□□ -0.35
C11orf54-209ENST00000530620 TMX2Q9Y320 296 aa12.84□□□□□ -0.35
C11orf54-209ENST00000530620 MSCO60682 206 aa12.83□□□□□ -0.36
C11orf54-209ENST00000530620 FLOT1O75955 427 aa12.83□□□□□ -0.36
C11orf54-209ENST00000530620 PLS1Q14651 629 aa12.83□□□□□ -0.36
C11orf54-209ENST00000530620 LRIT3Q3SXY7 679 aa12.83□□□□□ -0.36
C11orf54-209ENST00000530620 C6orf132Q5T0Z8 1188 aa12.83□□□□□ -0.36
C11orf54-209ENST00000530620 C12orf60Q5U649 245 aa12.83□□□□□ -0.36
C11orf54-209ENST00000530620 OLFML2BQ68BL8 750 aa12.83□□□□□ -0.36
C11orf54-209ENST00000530620 DPP9Q86TI2 863 aa12.83□□□□□ -0.36
C11orf54-209ENST00000530620 SHCBP1Q8NEM2 672 aa12.83□□□□□ -0.36
C11orf54-209ENST00000530620 LPAR1Q92633 364 aa12.83□□□□□ -0.36
C11orf54-209ENST00000530620 SENP6Q9GZR1 1112 aaPredicted RBP12.83□□□□□ -0.36
C11orf54-209ENST00000530620 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.83□□□□□ -0.36
C11orf54-209ENST00000530620 HOXC10Q9NYD6 342 aa12.83□□□□□ -0.36
C11orf54-209ENST00000530620 USP17L12C9JPN9 530 aa12.82□□□□□ -0.36
C11orf54-209ENST00000530620 USP17L21D6R901 530 aa12.82□□□□□ -0.36
C11orf54-209ENST00000530620 DNM1LO00429 736 aa12.82□□□□□ -0.36
C11orf54-209ENST00000530620 COBLO75128 1261 aa12.82□□□□□ -0.36
C11orf54-209ENST00000530620 CDK8P49336 464 aa12.82□□□□□ -0.36
C11orf54-209ENST00000530620 MDM2Q00987 491 aaPredicted RBP12.82□□□□□ -0.36
C11orf54-209ENST00000530620 UBE3CQ15386 1083 aa12.82□□□□□ -0.36
C11orf54-209ENST00000530620 C20orf194Q5TEA3 1177 aa12.82□□□□□ -0.36
C11orf54-209ENST00000530620 DMRTA1Q5VZB9 504 aa12.82□□□□□ -0.36
C11orf54-209ENST00000530620 ANO1Q5XXA6 986 aa12.82□□□□□ -0.36
C11orf54-209ENST00000530620 C16orf86Q6ZW13 317 aa12.82□□□□□ -0.36
C11orf54-209ENST00000530620 Q7L0L9 218 aa12.82□□□□□ -0.36
C11orf54-209ENST00000530620 MB21D1Q8N884 522 aa12.82□□□□□ -0.36
C11orf54-209ENST00000530620 SH2D4AQ9H788 454 aa12.82□□□□□ -0.36
C11orf54-209ENST00000530620 VCPKMTQ9H867 229 aa12.82□□□□□ -0.36
C11orf54-209ENST00000530620 RCAN3Q9UKA8 241 aa12.82□□□□□ -0.36
C11orf54-209ENST00000530620 WDR46O15213 610 aaKnown RBP12.81□□□□□ -0.36
C11orf54-209ENST00000530620 STRNO43815 780 aa12.81□□□□□ -0.36
C11orf54-209ENST00000530620 SMARCA5O60264 1052 aaPredicted RBP12.81□□□□□ -0.36
C11orf54-209ENST00000530620 SMYD5Q6GMV2 418 aa12.81□□□□□ -0.36
C11orf54-209ENST00000530620 NCAPG2Q86XI2 1143 aa12.81□□□□□ -0.36
C11orf54-209ENST00000530620 DEFB123Q8N688 67 aa12.81□□□□□ -0.36
C11orf54-209ENST00000530620 CCDC17Q96LX7 622 aa12.81□□□□□ -0.36
C11orf54-209ENST00000530620 LRRCC1Q9C099 1032 aa12.81□□□□□ -0.36
C11orf54-209ENST00000530620 PUS7LQ9H0K6 701 aaKnown RBP12.81□□□□□ -0.36
C11orf54-209ENST00000530620 MROH8Q9H579 483 aa12.81□□□□□ -0.36
C11orf54-209ENST00000530620 SLC4A4Q9Y6R1 1079 aa12.81□□□□□ -0.36
C11orf54-209ENST00000530620 PPP1R3GB7ZBB8 358 aa12.8□□□□□ -0.36
C11orf54-209ENST00000530620 EEF2P13639 858 aaKnown RBP12.8□□□□□ -0.36
C11orf54-209ENST00000530620 TMEM132BQ14DG7 1078 aa12.8□□□□□ -0.36
C11orf54-209ENST00000530620 TSR1Q2NL82 804 aaKnown RBP12.8□□□□□ -0.36
C11orf54-209ENST00000530620 GJC2Q5T442 439 aaPredicted RBP12.8□□□□□ -0.36
C11orf54-209ENST00000530620 CTR9Q6PD62 1173 aa12.8□□□□□ -0.36
C11orf54-209ENST00000530620 AMOTL1Q8IY63 956 aa12.8□□□□□ -0.36
C11orf54-209ENST00000530620 DDRGK1Q96HY6 314 aa12.8□□□□□ -0.36
C11orf54-209ENST00000530620 CHMP4BQ9H444 224 aaKnown RBP12.8□□□□□ -0.36
C11orf54-209ENST00000530620 FBXO28Q9NVF7 368 aa12.8□□□□□ -0.36
C11orf54-209ENST00000530620 LAMA2P24043 3122 aaKnown RBP12.79□□□□□ -0.36
C11orf54-209ENST00000530620 SEPT4O43236 478 aa12.79□□□□□ -0.36
C11orf54-209ENST00000530620 RTP1P59025 263 aa12.79□□□□□ -0.36
C11orf54-209ENST00000530620 PRAMEF19Q5SWL8 479 aa12.79□□□□□ -0.36
C11orf54-209ENST00000530620 ABRAQ8N0Z2 381 aa12.79□□□□□ -0.36
C11orf54-209ENST00000530620 SLC17A8Q8NDX2 589 aa12.79□□□□□ -0.36
C11orf54-209ENST00000530620 MAML3Q96JK9 1138 aa12.79□□□□□ -0.36
C11orf54-209ENST00000530620 ROBO3Q96MS0 1386 aa12.79□□□□□ -0.36
C11orf54-209ENST00000530620 KBTBD13C9JR72 458 aa12.78□□□□□ -0.36
C11orf54-209ENST00000530620 RAD21O60216 631 aa12.78□□□□□ -0.36
C11orf54-209ENST00000530620 FCER1AP12319 257 aa12.78□□□□□ -0.36
C11orf54-209ENST00000530620 FAM47AQ5JRC9 791 aa12.78□□□□□ -0.36
C11orf54-209ENST00000530620 FAM83BQ5T0W9 1011 aa12.78□□□□□ -0.36
C11orf54-209ENST00000530620 ZSCAN25Q6NSZ9 544 aa12.78□□□□□ -0.36
C11orf54-209ENST00000530620 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.78□□□□□ -0.36
C11orf54-209ENST00000530620 KANSL2Q9H9L4 492 aa12.78□□□□□ -0.36
C11orf54-209ENST00000530620 GOPCQ9HD26 462 aa12.78□□□□□ -0.36
C11orf54-209ENST00000530620 ECHDC1Q9NTX5 307 aa12.78□□□□□ -0.36
C11orf54-209ENST00000530620 SLC5A4Q9NY91 659 aa12.78□□□□□ -0.36
C11orf54-209ENST00000530620 ARPP21Q9UBL0 812 aaPredicted RBP12.78□□□□□ -0.36
C11orf54-209ENST00000530620 ZNF214Q9UL59 606 aaPredicted RBP12.78□□□□□ -0.36
C11orf54-209ENST00000530620 ADAMTS5Q9UNA0 930 aa12.78□□□□□ -0.36
C11orf54-209ENST00000530620 ATP11BQ9Y2G3 1177 aa12.78□□□□□ -0.36
C11orf54-209ENST00000530620 LRRC37A2A6NM11 1700 aa12.78□□□□□ -0.36
C11orf54-209ENST00000530620 VWA5AO00534 786 aa12.77□□□□□ -0.37
C11orf54-209ENST00000530620 SLC25A27O95847 323 aa12.77□□□□□ -0.37
C11orf54-209ENST00000530620 PGK2P07205 417 aa12.77□□□□□ -0.37
C11orf54-209ENST00000530620 COL9A1P20849 921 aa12.77□□□□□ -0.37
C11orf54-209ENST00000530620 TSHZ3Q63HK5 1081 aa12.77□□□□□ -0.37
C11orf54-209ENST00000530620 RIOX2Q8IUF8 465 aa12.77□□□□□ -0.37
C11orf54-209ENST00000530620 STK11IPQ8N1F8 1099 aa12.77□□□□□ -0.37
C11orf54-209ENST00000530620 ARRDC4Q8NCT1 418 aa12.77□□□□□ -0.37
C11orf54-209ENST00000530620 REPS2Q8NFH8 660 aa12.77□□□□□ -0.37
C11orf54-209ENST00000530620 STRBPQ96SI9 672 aaKnown RBP12.77□□□□□ -0.37
C11orf54-209ENST00000530620 MMP19Q99542 508 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms