RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 CHMLP26374 656 aa14.3□□□□□ -0.12
TRAPPC4-209ENST00000528230 TRIM32Q13049 653 aa14.3□□□□□ -0.12
TRAPPC4-209ENST00000528230 RCSD1Q6JBY9 416 aa14.3□□□□□ -0.12
TRAPPC4-209ENST00000528230 DPP9Q86TI2 863 aa14.3□□□□□ -0.12
TRAPPC4-209ENST00000528230 FAM160B2Q86V87 743 aa14.3□□□□□ -0.12
TRAPPC4-209ENST00000528230 CHURC1Q8WUH1 139 aa14.3□□□□□ -0.12
TRAPPC4-209ENST00000528230 ESR2Q92731 530 aa14.3□□□□□ -0.12
TRAPPC4-209ENST00000528230 DEFB118Q96PH6 123 aa14.3□□□□□ -0.12
TRAPPC4-209ENST00000528230 IGHA2P01877 340 aa14.29□□□□□ -0.12
TRAPPC4-209ENST00000528230 TFRCP02786 760 aaKnown RBP14.29□□□□□ -0.12
TRAPPC4-209ENST00000528230 TOP1P11387 765 aaKnown RBP14.29□□□□□ -0.12
TRAPPC4-209ENST00000528230 PRKAR2AP13861 404 aaKnown RBP14.29□□□□□ -0.12
TRAPPC4-209ENST00000528230 ADORA2AP29274 412 aa14.29□□□□□ -0.12
TRAPPC4-209ENST00000528230 SLC1A4P43007 532 aa14.29□□□□□ -0.12
TRAPPC4-209ENST00000528230 OAZ1P54368 228 aa14.29□□□□□ -0.12
TRAPPC4-209ENST00000528230 CACNB2Q08289 660 aaPredicted RBP14.29□□□□□ -0.12
TRAPPC4-209ENST00000528230 CCL14Q16627 93 aa14.29□□□□□ -0.12
TRAPPC4-209ENST00000528230 IMMTQ16891 758 aaKnown RBP14.29□□□□□ -0.12
TRAPPC4-209ENST00000528230 CCDC178Q5BJE1 867 aa14.29□□□□□ -0.12
TRAPPC4-209ENST00000528230 MFSD14CQ5VZR4 134 aa14.29□□□□□ -0.12
TRAPPC4-209ENST00000528230 OLFML2BQ68BL8 750 aa14.29□□□□□ -0.12
TRAPPC4-209ENST00000528230 TBC1D10CQ8IV04 446 aa14.29□□□□□ -0.12
TRAPPC4-209ENST00000528230 NPLOC4Q8TAT6 608 aa14.29□□□□□ -0.12
TRAPPC4-209ENST00000528230 TEX13BQ9BXU2 312 aa14.29□□□□□ -0.12
TRAPPC4-209ENST00000528230 SLC38A10Q9HBR0 1119 aa14.29□□□□□ -0.12
TRAPPC4-209ENST00000528230 TMEM232C9JQI7 657 aa14.28□□□□□ -0.12
TRAPPC4-209ENST00000528230 MCCP23508 829 aa14.28□□□□□ -0.12
TRAPPC4-209ENST00000528230 STAT2P52630 851 aa14.28□□□□□ -0.12
TRAPPC4-209ENST00000528230 UBE2Q1Q7Z7E8 422 aa14.28□□□□□ -0.12
TRAPPC4-209ENST00000528230 ANKLE1Q8NAG6 615 aa14.28□□□□□ -0.12
TRAPPC4-209ENST00000528230 DCAF4Q8WV16 495 aa14.28□□□□□ -0.12
TRAPPC4-209ENST00000528230 KIFC2Q96AC6 838 aa14.28□□□□□ -0.12
TRAPPC4-209ENST00000528230 TMEM47Q9BQJ4 181 aa14.28□□□□□ -0.12
TRAPPC4-209ENST00000528230 IL25Q9H293 177 aa14.28□□□□□ -0.12
TRAPPC4-209ENST00000528230 FLRT1Q9NZU1 646 aa14.28□□□□□ -0.12
TRAPPC4-209ENST00000528230 PLXNA1Q9UIW2 1896 aa14.28□□□□□ -0.12
TRAPPC4-209ENST00000528230 DIS3Q9Y2L1 958 aaKnown RBP14.28□□□□□ -0.12
TRAPPC4-209ENST00000528230 CTDP1Q9Y5B0 961 aaPredicted RBP14.28□□□□□ -0.12
TRAPPC4-209ENST00000528230 COBLO75128 1261 aa14.27□□□□□ -0.13
TRAPPC4-209ENST00000528230 KCTD2Q14681 263 aa14.27□□□□□ -0.13
TRAPPC4-209ENST00000528230 SNRNP48Q6IEG0 339 aaKnown RBP14.27□□□□□ -0.13
TRAPPC4-209ENST00000528230 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.27□□□□□ -0.13
TRAPPC4-209ENST00000528230 DGKHQ86XP1 1220 aa14.27□□□□□ -0.13
TRAPPC4-209ENST00000528230 MMP19Q99542 508 aa14.27□□□□□ -0.13
TRAPPC4-209ENST00000528230 KRT23Q9C075 422 aa14.27□□□□□ -0.13
TRAPPC4-209ENST00000528230 CNNM2Q9H8M5 875 aa14.27□□□□□ -0.13
TRAPPC4-209ENST00000528230 TNRC18O15417 2968 aaPredicted RBP14.27□□□□□ -0.13
TRAPPC4-209ENST00000528230 NEDD4P46934 1319 aa14.26□□□□□ -0.13
TRAPPC4-209ENST00000528230 SGSM2O43147 1006 aa14.26□□□□□ -0.13
TRAPPC4-209ENST00000528230 FARP2O94887 1054 aaPredicted RBP14.26□□□□□ -0.13
TRAPPC4-209ENST00000528230 BTNL9Q6UXG8 535 aa14.26□□□□□ -0.13
TRAPPC4-209ENST00000528230 IQCA1Q86XH1 822 aa14.26□□□□□ -0.13
TRAPPC4-209ENST00000528230 CPXCR1Q8N123 301 aa14.26□□□□□ -0.13
TRAPPC4-209ENST00000528230 ANKS1AQ92625 1134 aa14.26□□□□□ -0.13
TRAPPC4-209ENST00000528230 FBXO40Q9UH90 709 aa14.26□□□□□ -0.13
TRAPPC4-209ENST00000528230 OGDHLQ9ULD0 1010 aa14.26□□□□□ -0.13
TRAPPC4-209ENST00000528230 KDM4AO75164 1064 aa14.25□□□□□ -0.13
TRAPPC4-209ENST00000528230 ZNF792Q3KQV3 632 aa14.25□□□□□ -0.13
TRAPPC4-209ENST00000528230 PRPF38BQ5VTL8 546 aaKnown RBP14.25□□□□□ -0.13
TRAPPC4-209ENST00000528230 KCTD1Q719H9 257 aa14.25□□□□□ -0.13
TRAPPC4-209ENST00000528230 CHST13Q8NET6 341 aa14.25□□□□□ -0.13
TRAPPC4-209ENST00000528230 MAML3Q96JK9 1138 aa14.25□□□□□ -0.13
TRAPPC4-209ENST00000528230 HTATIP2Q9BUP3 242 aa14.25□□□□□ -0.13
TRAPPC4-209ENST00000528230 RAVER2Q9HCJ3 691 aaKnown RBP14.25□□□□□ -0.13
TRAPPC4-209ENST00000528230 ZSWIM5Q9P217 1185 aa14.25□□□□□ -0.13
TRAPPC4-209ENST00000528230 RIPK3Q9Y572 518 aa14.25□□□□□ -0.13
TRAPPC4-209ENST00000528230 U3KPZ7 1027 aaPredicted RBP14.25□□□□□ -0.13
TRAPPC4-209ENST00000528230 B4E1Z4 1266 aa14.24□□□□□ -0.13
TRAPPC4-209ENST00000528230 MSCO60682 206 aa14.24□□□□□ -0.13
TRAPPC4-209ENST00000528230 PDHBP11177 359 aa14.24□□□□□ -0.13
TRAPPC4-209ENST00000528230 CCND3P30281 292 aaPredicted RBP14.24□□□□□ -0.13
TRAPPC4-209ENST00000528230 CYP2C19P33261 490 aa14.24□□□□□ -0.13
TRAPPC4-209ENST00000528230 PTH1RQ03431 593 aa14.24□□□□□ -0.13
TRAPPC4-209ENST00000528230 IKQ13123 557 aaPredicted RBP14.24□□□□□ -0.13
TRAPPC4-209ENST00000528230 TKFCQ3LXA3 575 aa14.24□□□□□ -0.13
TRAPPC4-209ENST00000528230 LHX8Q68G74 356 aa14.24□□□□□ -0.13
TRAPPC4-209ENST00000528230 NRBP1Q9UHY1 535 aa14.24□□□□□ -0.13
TRAPPC4-209ENST00000528230 PRR12Q9ULL5 1215 aa14.24□□□□□ -0.13
TRAPPC4-209ENST00000528230 ISY1Q9ULR0 285 aaKnown RBP14.24□□□□□ -0.13
TRAPPC4-209ENST00000528230 FRMPD3Q5JV73 1810 aa14.24□□□□□ -0.13
TRAPPC4-209ENST00000528230 ZNF536O15090 1300 aa14.23□□□□□ -0.13
TRAPPC4-209ENST00000528230 DNAJC25-GNG10A0A024R161 153 aa14.23□□□□□ -0.13
TRAPPC4-209ENST00000528230 SNHG28P0DPA3 235 aa14.23□□□□□ -0.13
TRAPPC4-209ENST00000528230 CYBAP13498 195 aa14.23□□□□□ -0.13
TRAPPC4-209ENST00000528230 CCDC96Q2M329 555 aa14.23□□□□□ -0.13
TRAPPC4-209ENST00000528230 BMP2KLQ5H9B9 411 aa14.23□□□□□ -0.13
TRAPPC4-209ENST00000528230 NECAB2Q7Z6G3 386 aa14.23□□□□□ -0.13
TRAPPC4-209ENST00000528230 MSL3Q8N5Y2 521 aaKnown RBP14.23□□□□□ -0.13
TRAPPC4-209ENST00000528230 MAP4K1Q92918 833 aa14.23□□□□□ -0.13
TRAPPC4-209ENST00000528230 DDX11Q96FC9 970 aa14.23□□□□□ -0.13
TRAPPC4-209ENST00000528230 ZSCAN10Q96SZ4 725 aaPredicted RBP14.23□□□□□ -0.13
TRAPPC4-209ENST00000528230 ZKSCAN3Q9BRR0 538 aa14.23□□□□□ -0.13
TRAPPC4-209ENST00000528230 SMCHD1A6NHR9 2005 aa14.22□□□□□ -0.13
TRAPPC4-209ENST00000528230 BRCA2P51587 3418 aa14.22□□□□□ -0.13
TRAPPC4-209ENST00000528230 PGK2P07205 417 aa14.22□□□□□ -0.13
TRAPPC4-209ENST00000528230 CYP21A2P08686 494 aa14.22□□□□□ -0.13
TRAPPC4-209ENST00000528230 SLC4A3P48751 1232 aa14.22□□□□□ -0.13
TRAPPC4-209ENST00000528230 ZNF543Q08ER8 600 aa14.22□□□□□ -0.13
TRAPPC4-209ENST00000528230 TRDNQ13061 729 aa14.22□□□□□ -0.13
TRAPPC4-209ENST00000528230 KIAA1211Q6ZU35 1233 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms