RNA–Protein interactions for RNA: ENST00000527845.1

CKLF-CMTM1-202, Transcript of CKLF-CMTM1 readthrough, humanhuman

TSL 3

Gene CKLF-CMTM1, Length 504 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-202ENST00000527845 MTMR10Q9NXD2 777 aa20.85■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 FBXO40Q9UH90 709 aa20.85■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 FEM1BQ9UK73 627 aa20.85■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 TTLL1O95922 423 aa20.84■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 OAZ1P54368 228 aa20.84■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 TRIM60Q495X7 471 aa20.84■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 ZNF467Q7Z7K2 595 aaPredicted RBP20.84■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 GMCL1P1Q8NEA9 526 aa20.84■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 DDX11Q96FC9 970 aa20.84■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 NUP88Q99567 741 aaPredicted RBP20.84■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 PRDM5Q9NQX1 630 aaPredicted RBP20.84■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 MTMR4Q9NYA4 1195 aa20.84■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 CLIP2Q9UDT6 1046 aa20.84■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 DNAH12Q6ZR08 3092 aa20.84■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 SMCHD1A6NHR9 2005 aa20.83■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 M0R2C6 588 aa20.83■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 ZNF865P0CJ78 1059 aaPredicted RBP20.83■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 TSHZ3Q63HK5 1081 aa20.83■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 Q7L0L9 218 aa20.83■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 IFNL3Q8IZI9 196 aa20.83■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 STK11IPQ8N1F8 1099 aa20.83■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 TSEN34Q9BSV6 310 aaKnown RBP20.83■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 TSPY3P0CV98 308 aa20.82■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 TSPY8P0CW00 308 aa20.82■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 MAMDC4Q6UXC1 1216 aa20.82■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 CHST13Q8NET6 341 aa20.82■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 CEP95Q96GE4 821 aa20.82■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 FSD1Q9BTV5 496 aa20.82■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 NAPBQ9H115 298 aa20.82■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 SLC38A10Q9HBR0 1119 aa20.82■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 PDLIM7Q9NR12 457 aa20.82■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 TACC3Q9Y6A5 838 aa20.82■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 DNAJC25-GNG10A0A024R161 153 aa20.81■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 NEDD1Q8NHV4 660 aa20.81■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 PI4K2BQ8TCG2 481 aa20.81■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 FERMT2Q96AC1 680 aa20.81■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 KIFC2Q96AC6 838 aa20.81■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 ZBTB47Q9UFB7 747 aaPredicted RBP20.81■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 FAM184BQ9ULE4 1060 aa20.81■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 MOXD2PA6NHM9 499 aa20.8■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 PRDM1O75626 825 aa20.8■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 NUP133Q8WUM0 1156 aa20.8■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 A0A1W2PQ45 241 aaPredicted RBP20.79■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 A0A1W2PQY0 241 aa20.79■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 POTEB2H3BUK9 544 aa20.79■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 ADAMTS4O75173 837 aa20.79■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 PGK1P00558 417 aa20.79■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 CLTBP09497 229 aa20.79■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 BMP3P12645 472 aa20.79■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 TAL1P17542 331 aaPredicted RBP20.79■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 MX1P20591 662 aa20.79■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 PPARAQ07869 468 aa20.79■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 ZMYM1Q5SVZ6 1142 aa20.79■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 ZNF697Q5TEC3 545 aa20.79■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 FAM160B2Q86V87 743 aa20.79■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 CPXCR1Q8N123 301 aa20.79■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 ANKRD35Q8N283 1001 aa20.79■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 RIPK3Q9Y572 518 aa20.79■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 STAT2P52630 851 aa20.78■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 TLE2Q04725 743 aa20.78■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 SLFN13Q68D06 897 aa20.78■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 CHURC1Q8WUH1 139 aa20.78■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 BADQ92934 168 aa20.78■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 ABHD16BQ9H3Z7 469 aa20.78■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 RAVER2Q9HCJ3 691 aaKnown RBP20.78■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 SYNRGQ9UMZ2 1314 aa20.78■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 DUSP11O75319 330 aaKnown RBP20.77■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 SNAI1O95863 264 aaPredicted RBP20.77■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 LRRC47Q8N1G4 583 aaKnown RBP20.77■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 GMCL1Q96IK5 515 aa20.77■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 TOX2Q96NM4 488 aa20.77■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 SEC62Q99442 399 aaKnown RBP20.77■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 SPC25Q9HBM1 224 aa20.77■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 ZHX1Q9UKY1 873 aaPredicted RBP20.77■□□□□ 0.92
CKLF-CMTM1-202ENST00000527845 MROH7Q68CQ1 1323 aa20.77■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 COL6A3P12111 3177 aa20.77■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 DLL1O00548 723 aa20.76■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 KIAA0355O15063 1070 aa20.76■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 PLA2G6O60733 806 aa20.76■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 CST5P28325 142 aaPredicted RBP20.76■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 SLC4A3P48751 1232 aa20.76■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 TFAP4Q01664 338 aa20.76■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 TKFCQ3LXA3 575 aa20.76■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 ANKRD33Q7Z3H0 272 aa20.76■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 PCSK9Q8NBP7 692 aaKnown RBP20.76■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 ACAD9Q9H845 621 aa20.76■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 STARD7Q9NQZ5 370 aa20.76■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.76■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 PCDHB15Q9Y5E8 787 aa20.76■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 TRIM43BA6NCK2 446 aa20.75■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 DCDC2CA8MYV0 355 aa20.75■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 TMEM232C9JQI7 657 aa20.75■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 ACLYP53396 1101 aa20.75■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 SMAD3P84022 425 aaKnown RBP20.75■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 ACVR2BQ13705 512 aa20.75■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 SHHQ15465 462 aa20.75■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 TICAM2Q86XR7 235 aa20.75■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 KLHDC9Q8NEP7 349 aa20.75■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 TRIM43Q96BQ3 446 aaPredicted RBP20.75■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 ISY1Q9ULR0 285 aaKnown RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms