RNA–Protein interactions for RNA: ENST00000524827.5

CSTF3-206, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3 BASIC

Gene CSTF3, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-206ENST00000524827 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.62■□□□□ 0.25
CSTF3-206ENST00000524827 MOXD2PA6NHM9 499 aa16.62■□□□□ 0.25
CSTF3-206ENST00000524827 DCDC2CA8MYV0 355 aa16.62■□□□□ 0.25
CSTF3-206ENST00000524827 HMMRO75330 724 aa16.62■□□□□ 0.25
CSTF3-206ENST00000524827 ATP5JP18859 108 aa16.62■□□□□ 0.25
CSTF3-206ENST00000524827 UBE3CQ15386 1083 aa16.62■□□□□ 0.25
CSTF3-206ENST00000524827 SNRNP48Q6IEG0 339 aaKnown RBP16.62■□□□□ 0.25
CSTF3-206ENST00000524827 CTR9Q6PD62 1173 aa16.62■□□□□ 0.25
CSTF3-206ENST00000524827 SIRT2Q8IXJ6 389 aa16.62■□□□□ 0.25
CSTF3-206ENST00000524827 MSL3Q8N5Y2 521 aaKnown RBP16.62■□□□□ 0.25
CSTF3-206ENST00000524827 USP38Q8NB14 1042 aa16.62■□□□□ 0.25
CSTF3-206ENST00000524827 KLHDC9Q8NEP7 349 aa16.62■□□□□ 0.25
CSTF3-206ENST00000524827 NUP88Q99567 741 aaPredicted RBP16.62■□□□□ 0.25
CSTF3-206ENST00000524827 HAUS7Q99871 368 aa16.62■□□□□ 0.25
CSTF3-206ENST00000524827 SLF1Q9BQI6 1058 aa16.62■□□□□ 0.25
CSTF3-206ENST00000524827 ZHX1Q9UKY1 873 aaPredicted RBP16.62■□□□□ 0.25
CSTF3-206ENST00000524827 TBX21Q9UL17 535 aa16.62■□□□□ 0.25
CSTF3-206ENST00000524827 FAM184BQ9ULE4 1060 aa16.62■□□□□ 0.25
CSTF3-206ENST00000524827 MYADML2A6NDP7 307 aa16.61■□□□□ 0.25
CSTF3-206ENST00000524827 RAB11FIP3O75154 756 aa16.61■□□□□ 0.25
CSTF3-206ENST00000524827 SNAI1O95863 264 aaPredicted RBP16.61■□□□□ 0.25
CSTF3-206ENST00000524827 KCNA10Q16322 511 aa16.61■□□□□ 0.25
CSTF3-206ENST00000524827 CCSAPQ6IQ19 270 aaPredicted RBP16.61■□□□□ 0.25
CSTF3-206ENST00000524827 RPAP2Q8IXW5 612 aaPredicted RBP16.61■□□□□ 0.25
CSTF3-206ENST00000524827 SYMPKQ92797 1274 aaKnown RBP16.61■□□□□ 0.25
CSTF3-206ENST00000524827 RIPK3Q9Y572 518 aa16.61■□□□□ 0.25
CSTF3-206ENST00000524827 DNAJC25-GNG10A0A024R161 153 aa16.6■□□□□ 0.25
CSTF3-206ENST00000524827 TIMP1P01033 207 aa16.6■□□□□ 0.25
CSTF3-206ENST00000524827 IRX5P78411 483 aaPredicted RBP16.6■□□□□ 0.25
CSTF3-206ENST00000524827 MAMDC4Q6UXC1 1216 aa16.6■□□□□ 0.25
CSTF3-206ENST00000524827 TIFAQ96CG3 184 aa16.6■□□□□ 0.25
CSTF3-206ENST00000524827 DDX11Q96FC9 970 aa16.6■□□□□ 0.25
CSTF3-206ENST00000524827 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.6■□□□□ 0.25
CSTF3-206ENST00000524827 PUS7LQ9H0K6 701 aaKnown RBP16.6■□□□□ 0.25
CSTF3-206ENST00000524827 ARPP21Q9UBL0 812 aaPredicted RBP16.6■□□□□ 0.25
CSTF3-206ENST00000524827 MCM3APO60318 1980 aa16.6■□□□□ 0.25
CSTF3-206ENST00000524827 DUSP11O75319 330 aaKnown RBP16.59■□□□□ 0.25
CSTF3-206ENST00000524827 NDUFB10O96000 172 aa16.59■□□□□ 0.25
CSTF3-206ENST00000524827 RASA1P20936 1047 aa16.59■□□□□ 0.25
CSTF3-206ENST00000524827 CST5P28325 142 aaPredicted RBP16.59■□□□□ 0.25
CSTF3-206ENST00000524827 GLT1D1Q96MS3 346 aa16.59■□□□□ 0.25
CSTF3-206ENST00000524827 ZNF576Q9H609 170 aa16.59■□□□□ 0.25
CSTF3-206ENST00000524827 MYO9BQ13459 2157 aa16.59■□□□□ 0.25
CSTF3-206ENST00000524827 F5H6K3 240 aa16.58■□□□□ 0.24
CSTF3-206ENST00000524827 ADCY6O43306 1168 aa16.58■□□□□ 0.24
CSTF3-206ENST00000524827 C6orf222P0C671 652 aaPredicted RBP16.58■□□□□ 0.24
CSTF3-206ENST00000524827 SLC4A3P48751 1232 aa16.58■□□□□ 0.24
CSTF3-206ENST00000524827 KLRC3Q07444 240 aa16.58■□□□□ 0.24
CSTF3-206ENST00000524827 ACVR2BQ13705 512 aa16.58■□□□□ 0.24
CSTF3-206ENST00000524827 TJAP1Q5JTD0 557 aa16.58■□□□□ 0.24
CSTF3-206ENST00000524827 MFSD5Q6N075 450 aa16.58■□□□□ 0.24
CSTF3-206ENST00000524827 ZSCAN25Q6NSZ9 544 aa16.58■□□□□ 0.24
CSTF3-206ENST00000524827 ZNF467Q7Z7K2 595 aaPredicted RBP16.58■□□□□ 0.24
CSTF3-206ENST00000524827 CPXCR1Q8N123 301 aa16.58■□□□□ 0.24
CSTF3-206ENST00000524827 FGD4Q96M96 766 aa16.58■□□□□ 0.24
CSTF3-206ENST00000524827 ZBTB40Q9NUA8 1239 aa16.58■□□□□ 0.24
CSTF3-206ENST00000524827 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.58■□□□□ 0.24
CSTF3-206ENST00000524827 NYAP2Q9P242 653 aa16.58■□□□□ 0.24
CSTF3-206ENST00000524827 ELP1O95163 1332 aa16.58■□□□□ 0.24
CSTF3-206ENST00000524827 MROH7Q68CQ1 1323 aa16.58■□□□□ 0.24
CSTF3-206ENST00000524827 ATP2A1O14983 1001 aa16.57■□□□□ 0.24
CSTF3-206ENST00000524827 ASGR1P07306 291 aa16.57■□□□□ 0.24
CSTF3-206ENST00000524827 CDK7P50613 346 aa16.57■□□□□ 0.24
CSTF3-206ENST00000524827 PPIGQ13427 754 aaKnown RBP eCLIP16.57■□□□□ 0.241e-19■□□□□ 10.2
CSTF3-206ENST00000524827 SBK1Q52WX2 424 aa16.57■□□□□ 0.24
CSTF3-206ENST00000524827 TMEM240Q5SV17 173 aa16.57■□□□□ 0.24
CSTF3-206ENST00000524827 C16orf59Q7L2K0 433 aa16.57■□□□□ 0.24
CSTF3-206ENST00000524827 STK11IPQ8N1F8 1099 aa16.57■□□□□ 0.24
CSTF3-206ENST00000524827 PRPF38AQ8NAV1 312 aaKnown RBP16.57■□□□□ 0.24
CSTF3-206ENST00000524827 PCSK9Q8NBP7 692 aaKnown RBP16.57■□□□□ 0.24
CSTF3-206ENST00000524827 UPF3AQ9H1J1 476 aaKnown RBP16.57■□□□□ 0.24
CSTF3-206ENST00000524827 MKNK2Q9HBH9 465 aa16.57■□□□□ 0.24
CSTF3-206ENST00000524827 A0A0U1RQG5 324 aaPredicted RBP16.56■□□□□ 0.24
CSTF3-206ENST00000524827 GRXCR1A8MXD5 290 aa16.56■□□□□ 0.24
CSTF3-206ENST00000524827 ZBED4O75132 1171 aa16.56■□□□□ 0.24
CSTF3-206ENST00000524827 MS4A1P11836 297 aa16.56■□□□□ 0.24
CSTF3-206ENST00000524827 CSF2RAP15509 400 aa16.56■□□□□ 0.24
CSTF3-206ENST00000524827 PBX2P40425 430 aa16.56■□□□□ 0.24
CSTF3-206ENST00000524827 GJA9P57773 515 aa16.56■□□□□ 0.24
CSTF3-206ENST00000524827 CCDC144BQ3MJ40 725 aa16.56■□□□□ 0.24
CSTF3-206ENST00000524827 RASIP1Q5U651 963 aa16.56■□□□□ 0.24
CSTF3-206ENST00000524827 CCDC174Q6PII3 467 aa16.56■□□□□ 0.24
CSTF3-206ENST00000524827 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.56■□□□□ 0.24
CSTF3-206ENST00000524827 STRBPQ96SI9 672 aaKnown RBP16.56■□□□□ 0.24
CSTF3-206ENST00000524827 PBX4Q9BYU1 374 aa16.56■□□□□ 0.24
CSTF3-206ENST00000524827 ABHD16BQ9H3Z7 469 aa16.56■□□□□ 0.24
CSTF3-206ENST00000524827 SPC25Q9HBM1 224 aa16.56■□□□□ 0.24
CSTF3-206ENST00000524827 SLC38A10Q9HBR0 1119 aa16.56■□□□□ 0.24
CSTF3-206ENST00000524827 RAVER2Q9HCJ3 691 aaKnown RBP16.56■□□□□ 0.24
CSTF3-206ENST00000524827 DDX19BQ9UMR2 479 aa16.56■□□□□ 0.24
CSTF3-206ENST00000524827 COG6Q9Y2V7 657 aa16.56■□□□□ 0.24
CSTF3-206ENST00000524827 CTDP1Q9Y5B0 961 aaPredicted RBP16.56■□□□□ 0.24
CSTF3-206ENST00000524827 MYH4Q9Y623 1939 aa16.56■□□□□ 0.24
CSTF3-206ENST00000524827 IGKV6D-41A0A0C4DH26 115 aa16.55■□□□□ 0.24
CSTF3-206ENST00000524827 GSG1L2A8MUP6 293 aa16.55■□□□□ 0.24
CSTF3-206ENST00000524827 ARVCFO00192 962 aa16.55■□□□□ 0.24
CSTF3-206ENST00000524827 CCDC129Q6ZRS4 1044 aa16.55■□□□□ 0.24
CSTF3-206ENST00000524827 ARMCX2Q7L311 632 aa16.55■□□□□ 0.24
CSTF3-206ENST00000524827 FAM126BQ8IXS8 530 aa16.55■□□□□ 0.24
CSTF3-206ENST00000524827 ANKRD35Q8N283 1001 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms