RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 KCNH4Q9UQ05 1017 aa6.73□□□□□ -1.33
PABPC1-223ENST00000523636 COL4A1P02462 1669 aa6.73□□□□□ -1.33
PABPC1-223ENST00000523636 MGAMO43451 1857 aa6.73□□□□□ -1.33
PABPC1-223ENST00000523636 NUP98P52948 1817 aa6.72□□□□□ -1.33
PABPC1-223ENST00000523636 LOC102724159A0A0B4J2E5 919 aa6.72□□□□□ -1.33
PABPC1-223ENST00000523636 KHNYNO15037 678 aaKnown RBP6.72□□□□□ -1.33
PABPC1-223ENST00000523636 BNIP3LO60238 219 aa6.72□□□□□ -1.33
PABPC1-223ENST00000523636 IGHA2P01877 340 aa6.72□□□□□ -1.33
PABPC1-223ENST00000523636 MAPTP10636 758 aaKnown RBP6.72□□□□□ -1.33
PABPC1-223ENST00000523636 PIP4K2AP48426 406 aaPredicted RBP6.72□□□□□ -1.33
PABPC1-223ENST00000523636 ZNF280AP59817 542 aaPredicted RBP6.72□□□□□ -1.33
PABPC1-223ENST00000523636 PRKG1Q13976 671 aa6.72□□□□□ -1.33
PABPC1-223ENST00000523636 EIF4A2Q14240 407 aaKnown RBP6.72□□□□□ -1.33
PABPC1-223ENST00000523636 PWP2Q15269 919 aaKnown RBP6.72□□□□□ -1.33
PABPC1-223ENST00000523636 LCE2AQ5TA79 106 aaPredicted RBP6.72□□□□□ -1.33
PABPC1-223ENST00000523636 TPTE2Q6XPS3 522 aa6.72□□□□□ -1.33
PABPC1-223ENST00000523636 SV2AQ7L0J3 742 aa6.72□□□□□ -1.33
PABPC1-223ENST00000523636 TMC7Q7Z402 723 aa6.72□□□□□ -1.33
PABPC1-223ENST00000523636 EXOC8Q8IYI6 725 aa6.72□□□□□ -1.33
PABPC1-223ENST00000523636 TTC16Q8NEE8 873 aa6.72□□□□□ -1.33
PABPC1-223ENST00000523636 DRC1Q96MC2 740 aa6.72□□□□□ -1.33
PABPC1-223ENST00000523636 TRERF1Q96PN7 1200 aa6.72□□□□□ -1.33
PABPC1-223ENST00000523636 CRAMP1Q96RY5 1269 aa6.72□□□□□ -1.33
PABPC1-223ENST00000523636 ATP6V0A2Q9Y487 856 aa6.72□□□□□ -1.33
PABPC1-223ENST00000523636 RIPOR2Q9Y4F9 1068 aa6.72□□□□□ -1.33
PABPC1-223ENST00000523636 KCNMB2Q9Y691 235 aa6.72□□□□□ -1.33
PABPC1-223ENST00000523636 ASH1LQ9NR48 2969 aaKnown RBP6.71□□□□□ -1.34
PABPC1-223ENST00000523636 FAM186AA6NE01 2351 aa6.71□□□□□ -1.34
PABPC1-223ENST00000523636 ANKRD62A6NC57 917 aa6.71□□□□□ -1.34
PABPC1-223ENST00000523636 ANKRD33BA6NCL7 494 aa6.71□□□□□ -1.34
PABPC1-223ENST00000523636 TREHO43280 583 aa6.71□□□□□ -1.34
PABPC1-223ENST00000523636 ZBTB48P10074 688 aaPredicted RBP6.71□□□□□ -1.34
PABPC1-223ENST00000523636 RPS12P25398 132 aaKnown RBP6.71□□□□□ -1.34
PABPC1-223ENST00000523636 GRNP28799 593 aaKnown RBP6.71□□□□□ -1.34
PABPC1-223ENST00000523636 GRK4P32298 578 aa6.71□□□□□ -1.34
PABPC1-223ENST00000523636 LACTBP83111 547 aaPredicted RBP6.71□□□□□ -1.34
PABPC1-223ENST00000523636 KCTD2Q14681 263 aa6.71□□□□□ -1.34
PABPC1-223ENST00000523636 GRIN2CQ14957 1233 aa6.71□□□□□ -1.34
PABPC1-223ENST00000523636 PDE12Q6L8Q7 609 aaKnown RBP6.71□□□□□ -1.34
PABPC1-223ENST00000523636 CLEC4GQ6UXB4 293 aa6.71□□□□□ -1.34
PABPC1-223ENST00000523636 CMTR1Q8N1G2 835 aaKnown RBP6.71□□□□□ -1.34
PABPC1-223ENST00000523636 SREK1Q8WXA9 508 aaKnown RBP6.71□□□□□ -1.34
PABPC1-223ENST00000523636 GTPBP3Q969Y2 492 aaKnown RBP6.71□□□□□ -1.34
PABPC1-223ENST00000523636 ZNF496Q96IT1 587 aaPredicted RBP6.71□□□□□ -1.34
PABPC1-223ENST00000523636 DBNDD1Q9H9R9 158 aa6.71□□□□□ -1.34
PABPC1-223ENST00000523636 MARK1Q9P0L2 795 aa6.71□□□□□ -1.34
PABPC1-223ENST00000523636 SIPA1L3O60292 1781 aaPredicted RBP6.71□□□□□ -1.34
PABPC1-223ENST00000523636 BRWD1Q9NSI6 2320 aa6.71□□□□□ -1.34
PABPC1-223ENST00000523636 GVINP1Q7Z2Y8 2422 aa6.7□□□□□ -1.34
PABPC1-223ENST00000523636 DCDC2BA2VCK2 349 aa6.7□□□□□ -1.34
PABPC1-223ENST00000523636 H3BM21 787 aa6.7□□□□□ -1.34
PABPC1-223ENST00000523636 MARCH6O60337 910 aa6.7□□□□□ -1.34
PABPC1-223ENST00000523636 VIL1P09327 827 aaKnown RBP6.7□□□□□ -1.34
PABPC1-223ENST00000523636 HLFQ16534 295 aa6.7□□□□□ -1.34
PABPC1-223ENST00000523636 PLEKHO1Q53GL0 409 aaPredicted RBP6.7□□□□□ -1.34
PABPC1-223ENST00000523636 NPAS4Q8IUM7 802 aa6.7□□□□□ -1.34
PABPC1-223ENST00000523636 VWA5B2Q8N398 1253 aa6.7□□□□□ -1.34
PABPC1-223ENST00000523636 FBXL18Q96ME1 805 aa6.7□□□□□ -1.34
PABPC1-223ENST00000523636 THEGQ9P2T0 379 aa6.7□□□□□ -1.34
PABPC1-223ENST00000523636 NIP7Q9Y221 180 aaKnown RBP eCLIP6.7□□□□□ -1.34
PABPC1-223ENST00000523636 BPTFQ12830 3046 aa6.69□□□□□ -1.34
PABPC1-223ENST00000523636 SPEGQ15772 3267 aa6.69□□□□□ -1.34
PABPC1-223ENST00000523636 CDC14CA4D256 554 aa6.69□□□□□ -1.34
PABPC1-223ENST00000523636 SMIM22K7EJ46 135 aa6.69□□□□□ -1.34
PABPC1-223ENST00000523636 ZZEF1O43149 2961 aa6.69□□□□□ -1.34
PABPC1-223ENST00000523636 XYLBO75191 536 aa6.69□□□□□ -1.34
PABPC1-223ENST00000523636 STARD3NLO95772 234 aa6.69□□□□□ -1.34
PABPC1-223ENST00000523636 VSIG8P0DPA2 414 aa6.69□□□□□ -1.34
PABPC1-223ENST00000523636 MRPS5P82675 430 aaKnown RBP6.69□□□□□ -1.34
PABPC1-223ENST00000523636 SFSWAPQ12872 951 aaKnown RBP6.69□□□□□ -1.34
PABPC1-223ENST00000523636 TCIRG1Q13488 830 aa6.69□□□□□ -1.34
PABPC1-223ENST00000523636 CCINQ13939 588 aa6.69□□□□□ -1.34
PABPC1-223ENST00000523636 DSC3Q14574 896 aa6.69□□□□□ -1.34
PABPC1-223ENST00000523636 TRIP4Q15650 581 aaPredicted RBP6.69□□□□□ -1.34
PABPC1-223ENST00000523636 MAP3K11Q16584 847 aa6.69□□□□□ -1.34
PABPC1-223ENST00000523636 NBPF9Q3BBW0 867 aa6.69□□□□□ -1.34
PABPC1-223ENST00000523636 C8orf34Q49A92 452 aa6.69□□□□□ -1.34
PABPC1-223ENST00000523636 BRI3BPQ8WY22 251 aa6.69□□□□□ -1.34
PABPC1-223ENST00000523636 ANKS1AQ92625 1134 aa6.69□□□□□ -1.34
PABPC1-223ENST00000523636 ABHD17AQ96GS6 310 aa6.69□□□□□ -1.34
PABPC1-223ENST00000523636 GMLQ99445 158 aa6.69□□□□□ -1.34
PABPC1-223ENST00000523636 PAK6Q9NQU5 681 aaPredicted RBP6.69□□□□□ -1.34
PABPC1-223ENST00000523636 SRRDQ9UH36 339 aa6.69□□□□□ -1.34
PABPC1-223ENST00000523636 ANGEL1Q9UNK9 670 aaKnown RBP6.69□□□□□ -1.34
PABPC1-223ENST00000523636 PFASO15067 1338 aa6.69□□□□□ -1.34
PABPC1-223ENST00000523636 ABCC4O15439 1325 aa6.69□□□□□ -1.34
PABPC1-223ENST00000523636 FAM205AQ6ZU69 1335 aa6.69□□□□□ -1.34
PABPC1-223ENST00000523636 ANKRD36CQ5JPF3 1778 aa6.69□□□□□ -1.34
PABPC1-223ENST00000523636 MAST2Q6P0Q8 1798 aa6.69□□□□□ -1.34
PABPC1-223ENST00000523636 ZFYVE26Q68DK2 2539 aa6.68□□□□□ -1.34
PABPC1-223ENST00000523636 GPR182O15218 404 aa6.68□□□□□ -1.34
PABPC1-223ENST00000523636 FGFR3P22607 806 aa6.68□□□□□ -1.34
PABPC1-223ENST00000523636 SETQ01105 290 aaPredicted RBP6.68□□□□□ -1.34
PABPC1-223ENST00000523636 PLCB3Q01970 1234 aa6.68□□□□□ -1.34
PABPC1-223ENST00000523636 C9orf50Q5SZB4 431 aa6.68□□□□□ -1.34
PABPC1-223ENST00000523636 DPP8Q6V1X1 898 aaPredicted RBP6.68□□□□□ -1.34
PABPC1-223ENST00000523636 NECAB2Q7Z6G3 386 aa6.68□□□□□ -1.34
PABPC1-223ENST00000523636 FAM43AQ8N2R8 423 aa6.68□□□□□ -1.34
PABPC1-223ENST00000523636 SUPT20HQ8NEM7 779 aa6.68□□□□□ -1.34
PABPC1-223ENST00000523636 MRRFQ96E11 262 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms