RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 PLA2G6O60733 806 aa16.43■□□□□ 0.22
SDC2-203ENST00000519587 FLOT1O75955 427 aa16.43■□□□□ 0.22
SDC2-203ENST00000519587 CCT2P78371 535 aaKnown RBP16.43■□□□□ 0.22
SDC2-203ENST00000519587 KIAA1755Q5JYT7 1200 aa16.43■□□□□ 0.22
SDC2-203ENST00000519587 OTUD7BQ6GQQ9 843 aa16.43■□□□□ 0.22
SDC2-203ENST00000519587 CYP4F22Q6NT55 531 aa16.43■□□□□ 0.22
SDC2-203ENST00000519587 TMTC3Q6ZXV5 915 aa16.43■□□□□ 0.22
SDC2-203ENST00000519587 KCTD1Q719H9 257 aa16.43■□□□□ 0.22
SDC2-203ENST00000519587 MS4A4AQ96JQ5 239 aa16.43■□□□□ 0.22
SDC2-203ENST00000519587 ZCCHC17Q9NP64 241 aaKnown RBP16.43■□□□□ 0.22
SDC2-203ENST00000519587 MAD2L2Q9UI95 211 aa16.43■□□□□ 0.22
SDC2-203ENST00000519587 FAM155AB1AL88 458 aaPredicted RBP16.42■□□□□ 0.22
SDC2-203ENST00000519587 LARGE1O95461 756 aa16.42■□□□□ 0.22
SDC2-203ENST00000519587 GOLGA8HP0CJ92 632 aa16.42■□□□□ 0.22
SDC2-203ENST00000519587 OSBPP22059 807 aa16.42■□□□□ 0.22
SDC2-203ENST00000519587 SMARCA1P28370 1054 aa16.42■□□□□ 0.22
SDC2-203ENST00000519587 RASGRP2Q7LDG7 609 aa16.42■□□□□ 0.22
SDC2-203ENST00000519587 ANKRD23Q86SG2 305 aa16.42■□□□□ 0.22
SDC2-203ENST00000519587 TRIM22Q8IYM9 498 aa16.42■□□□□ 0.22
SDC2-203ENST00000519587 BRI3BPQ8WY22 251 aa16.42■□□□□ 0.22
SDC2-203ENST00000519587 SLF1Q9BQI6 1058 aa16.42■□□□□ 0.22
SDC2-203ENST00000519587 SPZ1Q9BXG8 430 aa16.42■□□□□ 0.22
SDC2-203ENST00000519587 NCOA5Q9HCD5 579 aaKnown RBP16.42■□□□□ 0.22
SDC2-203ENST00000519587 RBM27Q9P2N5 1060 aaKnown RBP16.42■□□□□ 0.22
SDC2-203ENST00000519587 PDE4DIPQ5VU43 2346 aa16.41■□□□□ 0.22
SDC2-203ENST00000519587 TESPA1A2RU30 521 aaPredicted RBP16.41■□□□□ 0.22
SDC2-203ENST00000519587 HSP90AA1P07900 732 aaKnown RBP16.41■□□□□ 0.22
SDC2-203ENST00000519587 HOXA7P31268 230 aaPredicted RBP16.41■□□□□ 0.22
SDC2-203ENST00000519587 AKAP17AQ02040 695 aaKnown RBP16.41■□□□□ 0.22
SDC2-203ENST00000519587 SCRN1Q12765 414 aa16.41■□□□□ 0.22
SDC2-203ENST00000519587 DGKZQ13574 1117 aa16.41■□□□□ 0.22
SDC2-203ENST00000519587 TREML2Q5T2D2 321 aa16.41■□□□□ 0.22
SDC2-203ENST00000519587 SYDE2Q5VT97 1194 aa16.41■□□□□ 0.22
SDC2-203ENST00000519587 BTNL9Q6UXG8 535 aa16.41■□□□□ 0.22
SDC2-203ENST00000519587 STAG2Q8N3U4 1231 aa16.41■□□□□ 0.22
SDC2-203ENST00000519587 NECAB1Q8N987 351 aa16.41■□□□□ 0.22
SDC2-203ENST00000519587 PRPF38AQ8NAV1 312 aaKnown RBP16.41■□□□□ 0.22
SDC2-203ENST00000519587 GTF3C2Q8WUA4 911 aaPredicted RBP16.41■□□□□ 0.22
SDC2-203ENST00000519587 LLPHQ9BRT6 129 aaKnown RBP16.41■□□□□ 0.22
SDC2-203ENST00000519587 CTDP1Q9Y5B0 961 aaPredicted RBP16.41■□□□□ 0.22
SDC2-203ENST00000519587 A0A0G2JMZ2 1700 aa16.41■□□□□ 0.22
SDC2-203ENST00000519587 PLEKHA8P1O95397 391 aa16.4■□□□□ 0.22
SDC2-203ENST00000519587 FDX1P10109 184 aa16.4■□□□□ 0.22
SDC2-203ENST00000519587 IFNAR1P17181 557 aa16.4■□□□□ 0.22
SDC2-203ENST00000519587 CDC27P30260 824 aa16.4■□□□□ 0.22
SDC2-203ENST00000519587 MOGSQ13724 837 aa16.4■□□□□ 0.22
SDC2-203ENST00000519587 COG2Q14746 738 aa16.4■□□□□ 0.22
SDC2-203ENST00000519587 CATSPERGQ6ZRH7 1159 aa16.4■□□□□ 0.22
SDC2-203ENST00000519587 CCDC83Q8IWF9 413 aa16.4■□□□□ 0.22
SDC2-203ENST00000519587 RRP36Q96EU6 259 aaKnown RBP16.4■□□□□ 0.22
SDC2-203ENST00000519587 PARK7Q99497 189 aaKnown RBP16.4■□□□□ 0.22
SDC2-203ENST00000519587 DAXXQ9UER7 740 aaPredicted RBP16.4■□□□□ 0.22
SDC2-203ENST00000519587 SEC63Q9UGP8 760 aaKnown RBP16.4■□□□□ 0.22
SDC2-203ENST00000519587 PPP1R9AQ9ULJ8 1098 aa16.4■□□□□ 0.22
SDC2-203ENST00000519587 KIF3AQ9Y496 699 aa16.4■□□□□ 0.22
SDC2-203ENST00000519587 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.4■□□□□ 0.22
SDC2-203ENST00000519587 RLFQ13129 1914 aa16.4■□□□□ 0.22
SDC2-203ENST00000519587 BAZ2BQ9UIF8 2168 aaKnown RBP16.39■□□□□ 0.21
SDC2-203ENST00000519587 BTBD19C9JJ37 291 aa16.39■□□□□ 0.21
SDC2-203ENST00000519587 PDHXO00330 501 aa16.39■□□□□ 0.21
SDC2-203ENST00000519587 ADD1P35611 737 aaKnown RBP16.39■□□□□ 0.21
SDC2-203ENST00000519587 TRAF1Q13077 416 aa16.39■□□□□ 0.21
SDC2-203ENST00000519587 GPAT2Q6NUI2 795 aa16.39■□□□□ 0.21
SDC2-203ENST00000519587 SAMD1Q6SPF0 538 aaPredicted RBP16.39■□□□□ 0.21
SDC2-203ENST00000519587 MB21D1Q8N884 522 aa16.39■□□□□ 0.21
SDC2-203ENST00000519587 KIFC2Q96AC6 838 aa16.39■□□□□ 0.21
SDC2-203ENST00000519587 ASCC2Q9H1I8 757 aaPredicted RBP16.39■□□□□ 0.21
SDC2-203ENST00000519587 FAM217BQ9NTX9 383 aaPredicted RBP16.39■□□□□ 0.21
SDC2-203ENST00000519587 HOXC10Q9NYD6 342 aa16.39■□□□□ 0.21
SDC2-203ENST00000519587 PNMA2Q9UL42 364 aa16.39■□□□□ 0.21
SDC2-203ENST00000519587 RBM19Q9Y4C8 960 aaKnown RBP16.39■□□□□ 0.21
SDC2-203ENST00000519587 CNTNAP5Q8WYK1 1306 aa16.39■□□□□ 0.21
SDC2-203ENST00000519587 STK36Q9NRP7 1315 aa16.39■□□□□ 0.21
SDC2-203ENST00000519587 COL11A1P12107 1806 aaPredicted RBP16.38■□□□□ 0.21
SDC2-203ENST00000519587 ALDH1A1P00352 501 aa16.38■□□□□ 0.21
SDC2-203ENST00000519587 SLC16A2P36021 539 aa16.38■□□□□ 0.21
SDC2-203ENST00000519587 MAP2K2P36507 400 aa16.38■□□□□ 0.21
SDC2-203ENST00000519587 HMGN5P82970 282 aaKnown RBP16.38■□□□□ 0.21
SDC2-203ENST00000519587 KIF23Q02241 960 aaPredicted RBP16.38■□□□□ 0.21
SDC2-203ENST00000519587 SSRP1Q08945 709 aaKnown RBP16.38■□□□□ 0.21
SDC2-203ENST00000519587 TTBK2Q6IQ55 1244 aa16.38■□□□□ 0.21
SDC2-203ENST00000519587 ADGRF4Q8IZF3 695 aa16.38■□□□□ 0.21
SDC2-203ENST00000519587 SRBD1Q8N5C6 995 aaKnown RBP16.38■□□□□ 0.21
SDC2-203ENST00000519587 SMCR8Q8TEV9 937 aaPredicted RBP16.38■□□□□ 0.21
SDC2-203ENST00000519587 RNF26Q9BY78 433 aaPredicted RBP16.38■□□□□ 0.21
SDC2-203ENST00000519587 UBA5Q9GZZ9 404 aa16.38■□□□□ 0.21
SDC2-203ENST00000519587 FBXO28Q9NVF7 368 aa16.38■□□□□ 0.21
SDC2-203ENST00000519587 PRR12Q9ULL5 1215 aa16.38■□□□□ 0.21
SDC2-203ENST00000519587 CASP8AP2Q9UKL3 1982 aa16.38■□□□□ 0.21
SDC2-203ENST00000519587 PTPDC1A2A3K4 754 aa16.37■□□□□ 0.21
SDC2-203ENST00000519587 CA12O43570 354 aa16.37■□□□□ 0.21
SDC2-203ENST00000519587 AOC2O75106 756 aa16.37■□□□□ 0.21
SDC2-203ENST00000519587 ZBED4O75132 1171 aa16.37■□□□□ 0.21
SDC2-203ENST00000519587 CUL4AQ13619 759 aa16.37■□□□□ 0.21
SDC2-203ENST00000519587 IFNL1Q8IU54 200 aa16.37■□□□□ 0.21
SDC2-203ENST00000519587 CCDC82Q8N4S0 544 aa16.37■□□□□ 0.21
SDC2-203ENST00000519587 WASF1Q92558 559 aa16.37■□□□□ 0.21
SDC2-203ENST00000519587 INTS4Q96HW7 963 aaKnown RBP16.37■□□□□ 0.21
SDC2-203ENST00000519587 SLC26A6Q9BXS9 759 aa16.37■□□□□ 0.21
SDC2-203ENST00000519587 RIOX1Q9H6W3 641 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms